diff --git a/pkgs/by-name/pa/paml/fix-ProcessNodeAnnotation-declaration.patch b/pkgs/by-name/pa/paml/fix-ProcessNodeAnnotation-declaration.patch deleted file mode 100644 index ffe065566ec0..000000000000 --- a/pkgs/by-name/pa/paml/fix-ProcessNodeAnnotation-declaration.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- a/src/mcmctree.c -+++ b/src/mcmctree.c -@@ -42,7 +42,7 @@ extern double PjumpOptimum; - - int GetOptions(char *ctlf); - int ReadTreeSeqs(FILE*fout); --int ProcessNodeAnnotation(); -+int ProcessNodeAnnotation(int* haslabel); - int ReadBlengthGH(char infile[]); - int GenerateBlengthGH(char infile[]); - int GetMem(void); diff --git a/pkgs/by-name/pa/paml/package.nix b/pkgs/by-name/pa/paml/package.nix index 2910b1f3f966..435bcafbc18a 100644 --- a/pkgs/by-name/pa/paml/package.nix +++ b/pkgs/by-name/pa/paml/package.nix @@ -6,20 +6,15 @@ stdenv.mkDerivation (finalAttrs: { pname = "paml"; - version = "4.10.7"; + version = "4.10.10"; src = fetchFromGitHub { owner = "abacus-gene"; repo = "paml"; - tag = finalAttrs.version; - hash = "sha256-P/oHaLxoQzjFuvmHyRdShHv1ayruy6O/I9w8aTyya2s="; + tag = "v${finalAttrs.version}"; + hash = "sha256-e93ldPcYpxtgei9+qPNxmhHkwwjpbywkQJklx+dsONM="; }; - patches = [ - # https://github.com/abacus-gene/paml/pull/78 - ./fix-ProcessNodeAnnotation-declaration.patch - ]; - env.NIX_CFLAGS_COMPILE = lib.optionalString stdenv.hostPlatform.isDarwin "-D_POSIX_C_SOURCE"; preBuild = ''