Merge master into staging-next

2026-07-20 15:41:16 +00:00 · 2021-02-17 06:14:47 +00:00
parent 79b7a67b55 bf11a28bd3
commit 3ed237717a
94 changed files with 777 additions and 649 deletions
--- a/pkgs/development/python-modules/cirq/default.nix
+++ b/pkgs/development/python-modules/cirq/default.nix
@@ -3,7 +3,6 @@
 , buildPythonPackage
 , pythonOlder
 , fetchFromGitHub
-, fetchpatch
 , freezegun
 , google-api-core
 , matplotlib
--- a/pkgs/development/python-modules/clifford/default.nix
+++ b/pkgs/development/python-modules/clifford/default.nix
@@ -46,11 +46,6 @@ buildPythonPackage rec {
    ipython
  ];

-  postPatch = ''
-    substituteInPlace setup.py \
-      --replace "'numba==0.43'" "'numba'"
-  '';
-
  # avoid collecting local files
  preCheck = ''
    cd clifford/test
--- a/pkgs/development/python-modules/cnvkit/default.nix
+++ b/pkgs/development/python-modules/cnvkit/default.nix
@@ -2,7 +2,6 @@
 , fetchFromGitHub
 , fetchpatch
 , rPackages
-, rWrapper
 , buildPythonPackage
 , biopython
 , numpy
@@ -55,11 +54,6 @@ buildPythonPackage rec {
    rPackages.DNAcopy
  ];

-  postPatch = ''
-    substituteInPlace setup.py \
-      --replace "pandas >= 0.20.1, < 0.25.0" "pandas"
-  '';
-
  checkInputs = [ R ];

  checkPhase = ''
--- a/pkgs/development/python-modules/csvs-to-sqlite/default.nix
+++ b/pkgs/development/python-modules/csvs-to-sqlite/default.nix
@@ -2,13 +2,12 @@
 , buildPythonPackage
 , fetchFromGitHub
 , isPy3k
-, pytestrunner
 , click
 , dateparser
 , pandas
 , py-lru-cache
 , six
-, pytest
+, pytestCheckHook
 }:

 buildPythonPackage rec {
@@ -23,11 +22,6 @@ buildPythonPackage rec {
    sha256 = "0p99cg76d3s7jxvigh5ad04dzhmr6g62qzzh4i6h7x9aiyvdhvk4";
  };

-  postPatch = ''
-    substituteInPlace setup.py \
-      --replace pandas~=0.25.0 pandas
-  '';
-
  propagatedBuildInputs = [
    click
    dateparser
@@ -37,13 +31,9 @@ buildPythonPackage rec {
  ];

  checkInputs = [
-    pytest
+    pytestCheckHook
  ];

-  checkPhase = ''
-    pytest
-  '';
-
  meta = with lib; {
    description = "Convert CSV files into a SQLite database";
    homepage = "https://github.com/simonw/csvs-to-sqlite";
--- a/pkgs/development/python-modules/cufflinks/default.nix
+++ b/pkgs/development/python-modules/cufflinks/default.nix
@@ -1,4 +1,4 @@
-{ lib, buildPythonPackage, fetchPypi, fetchpatch
+{ lib, buildPythonPackage, fetchPypi
 , chart-studio
 , colorlover
 , ipython
--- a/pkgs/development/python-modules/dask-image/default.nix
+++ b/pkgs/development/python-modules/dask-image/default.nix
@@ -1,7 +1,6 @@
 { lib
 , buildPythonPackage
 , fetchPypi
-, fetchpatch
 , dask
 , numpy, toolz # dask[array]
 , scipy
@@ -38,6 +37,7 @@ buildPythonPackage rec {
  checkPhase = ''
    pytest --ignore=tests/test_dask_image/
  '';
+  pythonImportsCheck = [ "dask_image" ];

  meta = with lib; {
    homepage = "https://github.com/dask/dask-image";
--- a/pkgs/development/python-modules/dask-ml/default.nix
+++ b/pkgs/development/python-modules/dask-ml/default.nix
@@ -12,10 +12,6 @@
 , six
 , multipledispatch
 , packaging
-, pytest
-, xgboost
-, tensorflow
-, joblib
 , distributed
 }:

--- a/pkgs/development/python-modules/dask-mpi/default.nix
+++ b/pkgs/development/python-modules/dask-mpi/default.nix
@@ -4,8 +4,6 @@
 , dask
 , distributed
 , mpi4py
-, pytest
-, requests
 }:

 buildPythonPackage rec {
@@ -17,15 +15,11 @@ buildPythonPackage rec {
    sha256 = "76e153fc8c58047d898970b33ede0ab1990bd4e69cc130c6627a96f11b12a1a7";
  };

-  checkInputs = [ pytest requests ];
  propagatedBuildInputs = [ dask distributed mpi4py ];

-  checkPhase = ''
-    py.test dask_mpi
-  '';
-
  # hardcoded mpirun path in tests
  doCheck = false;
+  pythonImportsCheck = [ "dask_mpi" ];

  meta = with lib; {
    homepage = "https://github.com/dask/dask-mpi";
--- a/pkgs/development/python-modules/dask-xgboost/default.nix
+++ b/pkgs/development/python-modules/dask-xgboost/default.nix
@@ -4,8 +4,6 @@
 , xgboost
 , dask
 , distributed
-, pytest
-, scikitlearn
 }:

 buildPythonPackage rec {
@@ -17,19 +15,17 @@ buildPythonPackage rec {
    sha256 = "3fbe1bf4344dc74edfbe9f928c7e3e6acc26dc57cefd8da8ae56a15469c6941c";
  };

-  checkInputs = [ pytest scikitlearn ];
  propagatedBuildInputs = [ xgboost dask distributed ];

-  checkPhase = ''
-    py.test dask_xgboost/tests/test_core.py
-  '';
-
  doCheck = false;
+  pythonImportsCheck = [ "dask_xdgboost" ];

  meta = with lib; {
    homepage = "https://github.com/dask/dask-xgboost";
    description = "Interactions between Dask and XGBoost";
    license = licenses.bsd3;
    maintainers = [ maintainers.costrouc ];
+    # TypeError: __init__() got an unexpected keyword argument 'iid'
+    broken = true;
  };
 }
--- a/pkgs/development/python-modules/datashader/default.nix
+++ b/pkgs/development/python-modules/datashader/default.nix
@@ -78,7 +78,7 @@ buildPythonPackage rec {

  # dask doesn't do well with large core counts
  checkPhase = ''
-    pytest -n $NIX_BUILD_CORES datashader -k 'not dask.array'
+    pytest -n $NIX_BUILD_CORES datashader -k 'not dask.array and not test_simple_nested'
  '';

  meta = with lib; {
--- a/pkgs/development/python-modules/dftfit/default.nix
+++ b/pkgs/development/python-modules/dftfit/default.nix
@@ -12,11 +12,7 @@
 , lammps-cython
 , pymatgen-lammps
 , pytestrunner
-, pytest
-, pytestcov
-, pytest-benchmark
 , isPy3k
-, openssh
 }:

 buildPythonPackage rec {
@@ -25,18 +21,27 @@ buildPythonPackage rec {
  disabled = (!isPy3k);

  src = fetchPypi {
-     inherit pname version;
-     sha256 = "4dcbde48948835dcf2d49d6628c9df5747a8ec505d517e374b8d6c7fe95892df";
+    inherit pname version;
+    sha256 = "4dcbde48948835dcf2d49d6628c9df5747a8ec505d517e374b8d6c7fe95892df";
  };

  buildInputs = [ pytestrunner ];
-  checkInputs = [ pytest pytestcov pytest-benchmark openssh ];
-  propagatedBuildInputs = [ pymatgen marshmallow pyyaml pygmo
-                            pandas scipy numpy scikitlearn
-                            lammps-cython pymatgen-lammps ];
+  propagatedBuildInputs = [
+    pymatgen
+    marshmallow
+    pyyaml
+    pygmo
+    pandas
+    scipy
+    numpy
+    scikitlearn
+    lammps-cython
+    pymatgen-lammps
+  ];

  # tests require git lfs download. and is quite large so skip tests
  doCheck = false;
+  pythonImportsCheck = [ "dftfit" ];

  meta = {
    description = "Ab-Initio Molecular Dynamics Potential Development";
--- a/pkgs/development/python-modules/distributed/default.nix
+++ b/pkgs/development/python-modules/distributed/default.nix
@@ -1,11 +1,6 @@
 { lib
 , buildPythonPackage
 , fetchPypi
-, pytest
-, pytest-repeat
-, pytest-timeout
-, mock
-, joblib
 , click
 , cloudpickle
 , dask
@@ -18,9 +13,6 @@
 , tornado
 , zict
 , pyyaml
-, isPy3k
-, futures
-, singledispatch
 , mpi4py
 , bokeh
 , pythonOlder
@@ -29,6 +21,7 @@
 buildPythonPackage rec {
  pname = "distributed";
  version = "2.30.1";
+  disabled = pythonOlder "3.6";

  # get full repository need conftest.py to run tests
  src = fetchPypi {
@@ -36,23 +29,14 @@ buildPythonPackage rec {
    sha256 = "1421d3b84a0885aeb2c4bdc9e8896729c0f053a9375596c9de8864e055e2ac8e";
  };

-  disabled = pythonOlder "3.6";
-
-  checkInputs = [ pytest pytest-repeat pytest-timeout mock joblib ];
  propagatedBuildInputs = [
      click cloudpickle dask msgpack psutil six
      sortedcontainers tblib toolz tornado zict pyyaml mpi4py bokeh
  ];

-  # tests take about 10-15 minutes
-  # ignore 5 cli tests out of 1000 total tests that fail due to subprocesses
-  # these tests are not critical to the library (only the cli)
-  checkPhase = ''
-    py.test distributed -m "not avoid-travis" -r s --timeout-method=thread --timeout=0 --durations=20 --ignore="distributed/cli/tests"
-  '';
-
  # when tested random tests would fail and not repeatably
  doCheck = false;
+  pythonImportsCheck = [ "distributed" ];

  meta = {
    description = "Distributed computation in Python.";
--- a/pkgs/development/python-modules/docplex/default.nix
+++ b/pkgs/development/python-modules/docplex/default.nix
@@ -9,12 +9,12 @@

 buildPythonPackage rec {
  pname = "docplex";
-  version = "2.19.202";
+  version = "2.20.204";

  # No source available from official repo
  src = fetchPypi {
    inherit pname version;
-    sha256 = "2b606dc645f99feae67dfc528620dddc773ecef5d59bcaeae68bba601f25162b";
+    sha256 = "sha256-JNjD9UtLHsMGwTuXydZ+L5+pPQ2eobkr26Yt9pgs1qA=";
  };

  propagatedBuildInputs = [
--- a/pkgs/development/python-modules/duckdb/default.nix
+++ b/pkgs/development/python-modules/duckdb/default.nix
@@ -6,7 +6,7 @@
 , pybind11
 , setuptools_scm
 , pytestrunner
-, pytest
+, pytestCheckHook
 }:

 buildPythonPackage rec {
@@ -31,18 +31,10 @@ buildPythonPackage rec {
    pytestrunner
  ];

-  checkInputs = [
-    pytest
-  ];
+  propagatedBuildInputs = [ numpy pandas ];

-  propagatedBuildInputs = [
-    numpy
-    pandas
-  ];
-
-  checkPhase = ''
-    pytest
-  '';
+  checkInputs = [ pytestCheckHook ];
+  pythonImportsCheck = [ "duckdb" ];

  meta = with lib; {
    description = "DuckDB is an embeddable SQL OLAP Database Management System";
--- a/pkgs/development/python-modules/fastparquet/default.nix
+++ b/pkgs/development/python-modules/fastparquet/default.nix
@@ -1,5 +1,5 @@
-{ lib, buildPythonPackage, fetchFromGitHub, numba, numpy, pandas, pytestrunner,
-thrift, pytest, python-snappy, lz4, zstd }:
+{ lib, buildPythonPackage, fetchFromGitHub, numba, numpy, pandas, pytestrunner
+, thrift, pytestCheckHook, python-snappy, lz4, zstandard, zstd }:

 buildPythonPackage rec {
  pname = "fastparquet";
@@ -12,15 +12,13 @@ buildPythonPackage rec {
    sha256 = "17i091kky34m2xivk29fqsyxxxa7v4352n79w01n7ni93za6wana";
  };

-  postPatch = ''
-    # FIXME: package zstandard
-    # removing the test dependency for now
-    substituteInPlace setup.py --replace "'zstandard'," ""
-  '';
-
  nativeBuildInputs = [ pytestrunner ];
  propagatedBuildInputs = [ numba numpy pandas thrift ];
-  checkInputs = [ pytest python-snappy lz4 zstd ];
+  checkInputs = [ pytestCheckHook python-snappy lz4 zstandard zstd ];
+
+  # E   ModuleNotFoundError: No module named 'fastparquet.speedups'
+  doCheck = false;
+  pythonImportsCheck = [ "fastparquet" ];

  meta = with lib; {
    description = "A python implementation of the parquet format";
--- a/pkgs/development/python-modules/flammkuchen/default.nix
+++ b/pkgs/development/python-modules/flammkuchen/default.nix
@@ -1,4 +1,4 @@
-{ lib, pkgs, buildPythonPackage, fetchPypi, isPy27
+{ lib, buildPythonPackage, fetchPypi, isPy27
 , numpy
 , scipy
 , tables
--- a/pkgs/development/python-modules/glymur/default.nix
+++ b/pkgs/development/python-modules/glymur/default.nix
@@ -2,7 +2,6 @@
 , buildPythonPackage
 , fetchFromGitHub
 , numpy
-, setuptools
 , python
 , scikitimage
 , openjpeg
--- a/pkgs/development/python-modules/graspologic/default.nix
+++ b/pkgs/development/python-modules/graspologic/default.nix
@@ -37,7 +37,7 @@ buildPythonPackage rec {
  ];

  checkInputs = [ pytestCheckHook pytestcov ];
-  pytestFlagsArray = [ "tests" "--ignore=docs" ];
+  pytestFlagsArray = [ "tests" "--ignore=docs" "--ignore=tests/test_sklearn.py" ];
  disabledTests = [ "gridplot_outputs" ];

  meta = with lib; {
--- a/pkgs/development/python-modules/image-match/default.nix
+++ b/pkgs/development/python-modules/image-match/default.nix
@@ -24,6 +24,7 @@ buildPythonPackage {

  # tests cannot work without elasticsearch
  doCheck = false;
+  pythonImportsCheck = [ "image_match" ];

  meta = with lib; {
    homepage = "https://github.com/ascribe/image-match";
--- a/pkgs/development/python-modules/imagecorruptions/default.nix
+++ b/pkgs/development/python-modules/imagecorruptions/default.nix
@@ -26,6 +26,9 @@ buildPythonPackage rec {
    opencv3
  ];

+  doCheck = false;
+  pythonImportsCheck = [ "imagecorruptions" ];
+
  meta = with lib; {
    homepage = "https://github.com/bethgelab/imagecorruptions";
    description = "This package provides a set of image corruptions";
--- a/pkgs/development/python-modules/imbalanced-learn/default.nix
+++ b/pkgs/development/python-modules/imbalanced-learn/default.nix
@@ -3,7 +3,6 @@
 , pandas
 , pytestCheckHook
 , scikitlearn
-, tensorflow
 }:

 buildPythonPackage rec {
--- a/pkgs/development/python-modules/intelhex/default.nix
+++ b/pkgs/development/python-modules/intelhex/default.nix
@@ -1,25 +1,23 @@
 { lib
 , buildPythonPackage
 , fetchPypi
-, fetchpatch
+, pytestCheckHook
 }:

 buildPythonPackage rec {
  pname = "intelhex";
-  version = "2.2.1";
+  version = "2.3.0";

  src = fetchPypi {
    inherit pname version;
-    sha256 = "0ckqjbxd8gwcg98gfzpn4vq1qxzfvq3rdbrr1hikj1nmw08qb780";
+    sha256 = "sha256-iStzYacZ9JRSN9qMz3VOlRPbMvViiFJ4WuoQjc0lAJM=";
  };

-  patches = [
-    # patch the tests to check for the correct version string (2.2.1)
-    (fetchpatch {
-      url = "https://patch-diff.githubusercontent.com/raw/bialix/intelhex/pull/26.patch";
-      sha256 = "1f3f2cyf9ipb9zdifmjs8rqhg028dhy91vabxxn3l7br657s8r2l";
-    })
-  ];
+  checkInputs = [ pytestCheckHook ];
+
+  pytestFlagsArray = [ "intelhex/test.py" ];
+
+  pythonImportsCheck = [ "intelhex" ];

  meta = {
    homepage = "https://github.com/bialix/intelhex";
--- a/pkgs/development/python-modules/lammps-cython/default.nix
+++ b/pkgs/development/python-modules/lammps-cython/default.nix
@@ -9,10 +9,7 @@
 , pymatgen
 , ase
 , pytestrunner
-, pytest_4
-, pytestcov
 , isPy3k
-, openssh
 }:

 buildPythonPackage rec {
@@ -26,7 +23,6 @@ buildPythonPackage rec {
  };

  buildInputs = [ cython pytestrunner ];
-  checkInputs = [ pytest_4 pytestcov openssh ];
  propagatedBuildInputs = [ mpi4py pymatgen ase numpy ];

  preBuild = ''
@@ -44,6 +40,8 @@ buildPythonPackage rec {
    EOF
  '';

+  pythonImportsCheck = [ "lammps" ];
+
  meta = {
    description = "Pythonic Wrapper to LAMMPS using cython";
    homepage = "https://gitlab.com/costrouc/lammps-cython";
--- a/pkgs/development/python-modules/libnacl/default.nix
+++ b/pkgs/development/python-modules/libnacl/default.nix
@@ -1,33 +1,41 @@
-{ lib, stdenv, buildPythonPackage, fetchFromGitHub, pytest, libsodium }:
+{ lib
+, stdenv
+, buildPythonPackage
+, fetchFromGitHub
+, libsodium
+, pytestCheckHook
+}:

 buildPythonPackage rec {
  pname = "libnacl";
-  version = "1.7.1";
+  version = "1.7.2";

  src = fetchFromGitHub {
    owner = "saltstack";
    repo = pname;
    rev = "v${version}";
-    sha256 = "10rpim9lf0qd861a3miq8iqg8w87slqwqni7nq66h72jdk130axg";
+    sha256 = "sha256-nttR9PQimhqd2pByJ5IJzJ4RmSI4y7lcX7a7jcK+vqc=";
  };

-  checkInputs = [ pytest ];
-  propagatedBuildInputs = [ libsodium ];
+  buildInputs = [ libsodium ];

  postPatch =
-    let soext = stdenv.hostPlatform.extensions.sharedLibrary; in ''
-    substituteInPlace "./libnacl/__init__.py" --replace "ctypes.cdll.LoadLibrary('libsodium${soext}')" "ctypes.cdll.LoadLibrary('${libsodium}/lib/libsodium${soext}')"
-  '';
+    let soext = stdenv.hostPlatform.extensions.sharedLibrary; in
+    ''
+      substituteInPlace "./libnacl/__init__.py" --replace \
+        "ctypes.cdll.LoadLibrary('libsodium${soext}')" \
+        "ctypes.cdll.LoadLibrary('${libsodium}/lib/libsodium${soext}')"
+    '';

-  checkPhase = ''
-    py.test
-  '';
+  checkInputs = [ pytestCheckHook ];
+
+  pythonImportsCheck = [ "libnacl" ];

  meta = with lib; {
-    maintainers = with maintainers; [ xvapx ];
    description = "Python bindings for libsodium based on ctypes";
-    homepage = "https://pypi.python.org/pypi/libnacl";
+    homepage = "https://libnacl.readthedocs.io/";
    license = licenses.asl20;
    platforms = platforms.unix;
+    maintainers = with maintainers; [ xvapx ];
  };
 }
--- a/pkgs/development/python-modules/nbsmoke/default.nix
+++ b/pkgs/development/python-modules/nbsmoke/default.nix
@@ -35,6 +35,7 @@ buildPythonPackage rec {

  # tests not included with pypi release
  doCheck = false;
+  pythonImportsCheck = [ "nbsmoke" ];

  meta = with lib; {
    description = "Basic notebook checks and linting";
--- a/pkgs/development/python-modules/osmnx/default.nix
+++ b/pkgs/development/python-modules/osmnx/default.nix
@@ -1,5 +1,5 @@
 { lib, buildPythonPackage, fetchFromGitHub, geopandas, descartes, matplotlib, networkx, numpy
-, pandas, requests, Rtree, shapely, pytest, coverage, coveralls, folium, scikitlearn, scipy}:
+, pandas, requests, Rtree, shapely, folium, scikitlearn, scipy}:

 buildPythonPackage rec {
  pname = "osmnx";
@@ -14,14 +14,9 @@ buildPythonPackage rec {

  propagatedBuildInputs = [ geopandas descartes matplotlib networkx numpy pandas requests Rtree shapely folium scikitlearn scipy ];

-  checkInputs = [ coverage pytest coveralls ];
-  #Fails when using sandboxing as it requires internet connection, works fine without it
+  # requires network
  doCheck = false;
-
-  #Check phase for the record
-  #checkPhase = ''
-  #  coverage run --source osmnx -m pytest --verbose
-  #'';
+  pythonImportsCheck = [ "osmnx" ];

  meta = with lib; {
    description = "A package to easily download, construct, project, visualize, and analyze complex street networks from OpenStreetMap with NetworkX.";
--- a/pkgs/development/python-modules/pandas-datareader/default.nix
+++ b/pkgs/development/python-modules/pandas-datareader/default.nix
@@ -1,7 +1,6 @@
 { lib
 , buildPythonPackage
 , fetchPypi
-, pytestCheckHook
 , isPy27
 , pandas
 , lxml
--- a/pkgs/development/python-modules/pims/default.nix
+++ b/pkgs/development/python-modules/pims/default.nix
@@ -23,6 +23,7 @@ buildPythonPackage rec {

  # not everything packaged with pypi release
  doCheck = false;
+  pythonImportsCheck = [ "pims" ];

  meta = with lib; {
    homepage = "https://github.com/soft-matter/pims";
--- a/pkgs/development/python-modules/pyarrow/default.nix
+++ b/pkgs/development/python-modules/pyarrow/default.nix
@@ -1,4 +1,4 @@
-{ lib, buildPythonPackage, python, isPy3k, arrow-cpp, cmake, cython, futures, hypothesis, numpy, pandas, pytestCheckHook, pytest-lazy-fixture, pkg-config, setuptools_scm, six }:
+{ lib, buildPythonPackage, python, isPy3k, arrow-cpp, cmake, cython, hypothesis, numpy, pandas, pytestCheckHook, pytest-lazy-fixture, pkg-config, setuptools_scm, six }:

 let
  _arrow-cpp = arrow-cpp.override { python3 = python; };
--- a/pkgs/development/python-modules/pybids/default.nix
+++ b/pkgs/development/python-modules/pybids/default.nix
@@ -1,7 +1,6 @@
 { buildPythonPackage
 , lib
 , fetchPypi
-, isPy27
 , click
 , num2words
 , numpy
@@ -11,8 +10,7 @@
 , patsy
 , bids-validator
 , sqlalchemy
-, pytest
-, pathlib
+, pytestCheckHook
 }:

 buildPythonPackage rec {
@@ -36,11 +34,8 @@ buildPythonPackage rec {
    sqlalchemy
  ];

-  checkInputs = [ pytest ] ++ lib.optionals isPy27 [ pathlib ];
-
-  checkPhase = ''
-    pytest
-  '';
+  checkInputs = [ pytestCheckHook ];
+  pythonImportsCheck = [ "bids" ];

  meta = with lib; {
    description = "Python tools for querying and manipulating BIDS datasets";
--- a/pkgs/development/python-modules/pyfakefs/default.nix
+++ b/pkgs/development/python-modules/pyfakefs/default.nix
@@ -1,13 +1,19 @@
-{ lib, stdenv, buildPythonPackage, fetchPypi, pythonOlder, python, pytest, glibcLocales }:
+{ lib
+, stdenv
+, buildPythonPackage
+, fetchPypi
+, pytestCheckHook
+, pythonOlder
+}:

 buildPythonPackage rec {
-  version = "4.3.2";
+  version = "4.3.3";
  pname = "pyfakefs";
  disabled = pythonOlder "3.5";

  src = fetchPypi {
    inherit pname version;
-    sha256 = "dfeed4715e2056e3e56b9c5f51a679ce2934897eef926f3d14e5364e43f19070";
+    sha256 = "sha256-/7KrJkoLg69Uii2wxQl5jiCDYd85YBuomK5lzs+1nLs=";
  };

  postPatch = ''
@@ -25,20 +31,16 @@ buildPythonPackage rec {
      --replace "test_rename_dir_to_existing_dir" "notest_rename_dir_to_existing_dir"
  '');

-  checkInputs = [ pytest glibcLocales ];
-
-  checkPhase = ''
-    export LC_ALL=en_US.UTF-8
-    ${python.interpreter} -m pyfakefs.tests.all_tests
-    ${python.interpreter} -m pyfakefs.tests.all_tests_without_extra_packages
-    ${python.interpreter} -m pytest pyfakefs/pytest_tests/pytest_plugin_test.py
-  '';
+  checkInputs = [ pytestCheckHook ];
+  # https://github.com/jmcgeheeiv/pyfakefs/issues/581 (OSError: [Errno 9] Bad file descriptor)
+  disabledTests = [ "test_open_existing_pipe" ];
+  pythonImportsCheck = [ "pyfakefs" ];

  meta = with lib; {
    description = "Fake file system that mocks the Python file system modules";
-    license     = licenses.asl20;
-    homepage    = "http://pyfakefs.org/";
-    changelog   = "https://github.com/jmcgeheeiv/pyfakefs/blob/master/CHANGES.md";
+    homepage = "http://pyfakefs.org/";
+    changelog = "https://github.com/jmcgeheeiv/pyfakefs/blob/master/CHANGES.md";
+    license = licenses.asl20;
    maintainers = with maintainers; [ gebner ];
  };
 }
--- a/pkgs/development/python-modules/pyfftw/default.nix
+++ b/pkgs/development/python-modules/pyfftw/default.nix
@@ -10,20 +10,18 @@ buildPythonPackage rec {
    sha256 = "60988e823ca75808a26fd79d88dbae1de3699e72a293f812aa4534f8a0a58cb0";
  };

+  preConfigure = ''
+    export LDFLAGS="-L${fftw.out}/lib -L${fftwFloat.out}/lib -L${fftwLongDouble.out}/lib"
+    export CFLAGS="-I${fftw.dev}/include -I${fftwFloat.dev}/include -I${fftwLongDouble.dev}/include"
+  '';
+
  buildInputs = [ fftw fftwFloat fftwLongDouble];

  propagatedBuildInputs = [ numpy scipy cython dask ];

  # Tests cannot import pyfftw. pyfftw works fine though.
  doCheck = false;
-
-  preConfigure = ''
-    export LDFLAGS="-L${fftw.out}/lib -L${fftwFloat.out}/lib -L${fftwLongDouble.out}/lib"
-    export CFLAGS="-I${fftw.dev}/include -I${fftwFloat.dev}/include -I${fftwLongDouble.dev}/include"
-  '';
-  #+ optionalString isDarwin ''
-  #  export DYLD_LIBRARY_PATH="${pkgs.fftw.out}/lib"
-  #'';
+  pythonImportsCheck = [ "pyfftw" ];

  meta = with lib; {
    description = "A pythonic wrapper around FFTW, the FFT library, presenting a unified interface for all the supported transforms";
--- a/pkgs/development/python-modules/pymatgen-lammps/default.nix
+++ b/pkgs/development/python-modules/pymatgen-lammps/default.nix
@@ -3,14 +3,14 @@
 , buildPythonPackage
 , pymatgen
 , pytestrunner
-, pytest
+, pytestCheckHook
 , isPy3k
 }:

 buildPythonPackage rec {
  pname = "pymatgen-lammps";
  version = "0.4.5";
-  disabled = (!isPy3k);
+  disabled = !isPy3k;

  src = fetchurl {
     url = "https://gitlab.com/costrouc/${pname}/-/archive/v${version}/${pname}-v${version}.tar.gz";
@@ -18,13 +18,17 @@ buildPythonPackage rec {
  };

  buildInputs = [ pytestrunner ];
-  checkInputs = [ pytest ];
+  checkInputs = [ pytestCheckHook ];
  propagatedBuildInputs = [ pymatgen ];

+  pythonImportsCheck = [ "pmg_lammps" ];
+
  meta = {
    description = "A LAMMPS wrapper using pymatgen";
    homepage = "https://gitlab.com/costrouc/pymatgen-lammps";
    license = lib.licenses.mit;
    maintainers = with lib.maintainers; [ costrouc ];
+    # not compatible with recent versions of pymatgen
+    broken = true;
  };
 }
--- a/pkgs/development/python-modules/pymatgen/default.nix
+++ b/pkgs/development/python-modules/pymatgen/default.nix
@@ -52,6 +52,7 @@ buildPythonPackage rec {

  # No tests in pypi tarball.
  doCheck = false;
+  pythonImportsCheck = [ "pymatgen" ];

  meta = with lib; {
    description = "A robust materials analysis code that defines core object representations for structures and molecules";
--- a/pkgs/development/python-modules/pytrends/default.nix
+++ b/pkgs/development/python-modules/pytrends/default.nix
@@ -17,10 +17,11 @@ buildPythonPackage rec {
    sha256 = "8ccb06c57c31fa157b978a0d810de7718ee46583d28cf818250d45f36abd2faa";
  };

-  doCheck = false;
-
  propagatedBuildInputs = [ requests lxml pandas ];

+  doCheck = false;
+  pythonImportsCheck = [ "pytrends" ];
+
  meta = with lib; {
    description = "Pseudo API for Google Trends";
    homepage = "https://github.com/GeneralMills/pytrends";
--- a/pkgs/development/python-modules/qiskit-aer/default.nix
+++ b/pkgs/development/python-modules/qiskit-aer/default.nix
@@ -2,11 +2,11 @@
 , pythonOlder
 , buildPythonPackage
 , fetchFromGitHub
-, fetchpatch
  # C Inputs
 , blas
 , catch2
 , cmake
+, conan
 , cython
 , fmt
 , muparserx
@@ -28,7 +28,7 @@

 buildPythonPackage rec {
  pname = "qiskit-aer";
-  version = "0.7.1";
+  version = "0.7.4";

  disabled = pythonOlder "3.6";

@@ -36,7 +36,7 @@ buildPythonPackage rec {
    owner = "Qiskit";
    repo = "qiskit-aer";
    rev = version;
-    sha256 = "07l0wavdknx0y4vy0hwgw24365sg4nb6ygl3lpa098np85qgyn4y";
+    sha256 = "sha256-o6c1ZcGFZ3pwinzMTif1nqF29Wq0Nog1++ZoJGuiKxo=";
  };

  nativeBuildInputs = [
@@ -61,10 +61,13 @@ buildPythonPackage rec {
    pybind11
  ];

-  patches = [
-    # TODO: remove in favor of qiskit-aer PR #877 patch once accepted/stable
-    ./remove-conan-install.patch
-  ];
+  postPatch = ''
+    substituteInPlace setup.py --replace "'cmake!=3.17,!=3.17.0'," ""
+  '';
+
+  preBuild = ''
+    export DISABLE_CONAN=1
+  '';

  dontUseCmakeConfigure = true;

--- a/pkgs/development/python-modules/qiskit-aer/remove-conan-install.patch
+++ b/pkgs/development/python-modules/qiskit-aer/remove-conan-install.patch
@@ -1,63 +0,0 @@
-diff --git a/CMakeLists.txt b/CMakeLists.txt
-index efeacfc..77bd6bd 100755
--- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -121,7 +121,11 @@ endif()
- # Looking for external libraries
- #
- 
-setup_conan()
-+find_package(muparserx REQUIRED)
-+find_package(nlohmann_json REQUIRED)
-+find_package(spdlog REQUIRED)
-+# for tests only
-+find_package(catch2)
- 
- # If we do not set them with a space CMake fails afterwards if nothing is set for this vars!
- set(AER_LINKER_FLAGS " ")
-@@ -269,16 +273,16 @@ endif()
- set(AER_LIBRARIES
- 	${AER_LIBRARIES}
- 	${BLAS_LIBRARIES}
-	CONAN_PKG::nlohmann_json
-+	nlohmann_json
- 	Threads::Threads
-	CONAN_PKG::spdlog
-+	spdlog
- 	${DL_LIB}
- 	${THRUST_DEPENDANT_LIBS})
- 
- set(AER_COMPILER_DEFINITIONS ${AER_COMPILER_DEFINITIONS} ${CONAN_DEFINES})
- # Cython build is only enabled if building through scikit-build.
- if(SKBUILD) # Terra Addon build
-	set(AER_LIBRARIES ${AER_LIBRARIES} CONAN_PKG::muparserx)
-+	set(AER_LIBRARIES ${AER_LIBRARIES} muparserx)
- 	add_subdirectory(qiskit/providers/aer/pulse/qutip_extra_lite/cy)
- 	add_subdirectory(qiskit/providers/aer/backends/wrappers)
- 	add_subdirectory(src/open_pulse)
-diff --git a/setup.py b/setup.py
-index fd71e9f..1561cc4 100644
--- a/setup.py
-+++ b/setup.py
-@@ -11,12 +11,6 @@ import inspect
- 
- PACKAGE_NAME = os.getenv('QISKIT_AER_PACKAGE_NAME', 'qiskit-aer')
- 
-try:
-    from conans import client
-except ImportError:
-    subprocess.call([sys.executable, '-m', 'pip', 'install', 'conan'])
-    from conans import client
-
- try:
-     from skbuild import setup
- except ImportError:
-@@ -46,8 +40,6 @@ common_requirements = [
- 
- setup_requirements = common_requirements + [
-     'scikit-build',
-    'cmake!=3.17,!=3.17.0',
-    'conan>=1.22.2'
- ]
- 
- requirements = common_requirements + ['qiskit-terra>=0.12.0']
--- a/pkgs/development/python-modules/qiskit-aqua/default.nix
+++ b/pkgs/development/python-modules/qiskit-aqua/default.nix
@@ -34,7 +34,7 @@

 buildPythonPackage rec {
  pname = "qiskit-aqua";
-  version = "0.8.1";
+  version = "0.8.2";

  disabled = pythonOlder "3.6";

@@ -43,7 +43,7 @@ buildPythonPackage rec {
    owner = "Qiskit";
    repo = "qiskit-aqua";
    rev = version;
-    sha256 = "11qyya3vyq50wpzrzzl8v46yx5p72rhpqhybwn47qgazxgg82r1b";
+    sha256 = "sha256-ybf8bXqsVk6quYi0vrfo/Mplk7Nr7tQS7cevXxI9khw=";
  };

  # Optional packages: pyscf (see below NOTE) & pytorch. Can install via pip/nix if needed.
@@ -73,13 +73,8 @@ buildPythonPackage rec {
  # It can also be installed at runtime from the pip wheel.
  # We disable appropriate tests below to allow building without pyscf installed

-  # NOTE: we remove cplex b/c we can't build pythonPackages.cplex.
-  # cplex is only distributed in manylinux1 wheel (no source), and Nix python is not manylinux1 compatible
-
  postPatch = ''
-    substituteInPlace setup.py \
-      --replace "pyscf; sys_platform != 'win32'" "" \
-      --replace "cplex; python_version >= '3.6' and python_version < '3.8'" ""
+    substituteInPlace setup.py --replace "docplex==2.15.194" "docplex"

    # Add ImportWarning when running qiskit.chemistry (pyscf is a chemistry package) that pyscf is not included
    echo -e "\nimport warnings\ntry: import pyscf;\nexcept ImportError:\n    " \
--- a/pkgs/development/python-modules/qiskit-ignis/default.nix
+++ b/pkgs/development/python-modules/qiskit-ignis/default.nix
@@ -2,7 +2,6 @@
 , pythonOlder
 , buildPythonPackage
 , fetchFromGitHub
-, fetchpatch
 , python
 , numpy
 , qiskit-terra
@@ -24,7 +23,7 @@

 buildPythonPackage rec {
  pname = "qiskit-ignis";
-  version = "0.5.1";
+  version = "0.5.2";

  disabled = pythonOlder "3.6";

@@ -33,11 +32,11 @@ buildPythonPackage rec {
    owner = "Qiskit";
    repo = "qiskit-ignis";
    rev = version;
-    sha256 = "17kplmi17axcbbgw35dzfr3d5bzfymxfni9sf6v14223c5674p4y";
+    sha256 = "sha256-Kl3tnoamZrCxwoDdu8betG6Lf3CC3D8R2TYiq8Zl3Aw=";
  };

  # hacky, fix https://github.com/Qiskit/qiskit-ignis/issues/532.
-  # TODO: remove on qiskit-ignis v0.5.1
+  # TODO: remove on qiskit-ignis v0.5.2
  postPatch = ''
    substituteInPlace qiskit/ignis/mitigation/expval/base_meas_mitigator.py --replace "plt.axes" "'plt.axes'"
  '';
--- a/pkgs/development/python-modules/qiskit-terra/default.nix
+++ b/pkgs/development/python-modules/qiskit-terra/default.nix
@@ -56,7 +56,7 @@ in

 buildPythonPackage rec {
  pname = "qiskit-terra";
-  version = "0.16.1";
+  version = "0.16.4";

  disabled = pythonOlder "3.6";

@@ -64,7 +64,7 @@ buildPythonPackage rec {
    owner = "Qiskit";
    repo = pname;
    rev = version;
-    sha256 = "0007glsbrvq9swamvz8r76z9nzh46b388y0ds1dypczxpwlp9xcq";
+    sha256 = "sha256-/rWlPfpAHoMedKG42jfUYt0Ezq7i+9dkyPllavkg4cc=";
  };

  nativeBuildInputs = [ cython ];
--- a/pkgs/development/python-modules/qiskit/default.nix
+++ b/pkgs/development/python-modules/qiskit/default.nix
@@ -15,7 +15,7 @@
 buildPythonPackage rec {
  pname = "qiskit";
  # NOTE: This version denotes a specific set of subpackages. See https://qiskit.org/documentation/release_notes.html#version-history
-  version = "0.23.1";
+  version = "0.23.5";

  disabled = pythonOlder "3.6";

@@ -23,7 +23,7 @@ buildPythonPackage rec {
    owner = "qiskit";
    repo = "qiskit";
    rev = version;
-    sha256 = "0x4cqx1wqqj7h5g3vdag694qjzsmvhpw25yrlcs70mh5ywdp28x1";
+    sha256 = "sha256-qtMFztAeqNz0FSgQnOOrvAdPcbUCAal7KrVmpNvvBiY=";
  };

  propagatedBuildInputs = [
--- a/pkgs/development/python-modules/quandl/default.nix
+++ b/pkgs/development/python-modules/quandl/default.nix
@@ -46,6 +46,8 @@ buildPythonPackage rec {
    importlib-metadata
  ];

+  pythonImportsCheck = [ "quandl" ];
+
  meta = with lib; {
    description = "Quandl Python client library";
    homepage = "https://github.com/quandl/quandl-python";
--- a/pkgs/development/python-modules/rpy2/default.nix
+++ b/pkgs/development/python-modules/rpy2/default.nix
@@ -1,8 +1,6 @@
 { stdenv
 , lib
-, python
 , buildPythonPackage
-, fetchpatch
 , fetchPypi
 , isPyPy
 , R
--- a/pkgs/development/python-modules/scikit-bio/default.nix
+++ b/pkgs/development/python-modules/scikit-bio/default.nix
@@ -32,12 +32,6 @@ buildPythonPackage rec {
  checkInputs = [ coverage ];
  propagatedBuildInputs = [ lockfile cachecontrol decorator ipython matplotlib natsort numpy pandas scipy hdmedians scikitlearn ];

-  # remove on when version > 0.5.4
-  postPatch = ''
-    sed -i "s/numpy >= 1.9.2, < 1.14.0/numpy/" setup.py
-    sed -i "s/pandas >= 0.19.2, < 0.23.0/pandas/" setup.py
-  '';
-
  # cython package not included for tests
  doCheck = false;

@@ -45,6 +39,8 @@ buildPythonPackage rec {
    ${python.interpreter} -m skbio.test
  '';

+  pythonImportsCheck = [ "skbio" ];
+
  meta = with lib; {
    homepage = "http://scikit-bio.org/";
    description = "Data structures, algorithms and educational resources for bioinformatics";
--- a/pkgs/development/python-modules/seaborn/default.nix
+++ b/pkgs/development/python-modules/seaborn/default.nix
@@ -26,6 +26,7 @@ buildPythonPackage rec {

  # Computationally very demanding tests
  doCheck = false;
+  pythonImportsCheck= [ "seaborn" ];

  meta = {
    description = "Statisitical data visualization";
--- a/pkgs/development/python-modules/skorch/default.nix
+++ b/pkgs/development/python-modules/skorch/default.nix
@@ -26,10 +26,13 @@ buildPythonPackage rec {
  propagatedBuildInputs = [ numpy pytorch scikitlearn scipy tabulate tqdm ];
  checkInputs = [ pytest pytestcov flaky pandas pytestCheckHook ];

-  # on CPU, these expect artifacts from previous GPU run
  disabledTests = [
+    # on CPU, these expect artifacts from previous GPU run
    "test_load_cuda_params_to_cpu"
+    # failing tests
    "test_pickle_load"
+    "test_grid_search_with_slds_"
+    "test_grid_search_with_dict_works"
  ];

  meta = with lib; {
--- a/pkgs/development/python-modules/solo-python/default.nix
+++ b/pkgs/development/python-modules/solo-python/default.nix
@@ -1,9 +1,20 @@
-{ lib, buildPythonPackage, fetchFromGitHub, pythonOlder
-, click, ecdsa, fido2, intelhex, pyserial, pyusb, requests}:
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, pythonOlder
+, click
+, cryptography
+, ecdsa
+, fido2
+, intelhex
+, pyserial
+, pyusb
+, requests
+}:

 buildPythonPackage rec {
  pname = "solo-python";
-  version = "0.0.26";
+  version = "0.0.27";
  format = "flit";
  disabled = pythonOlder "3.6"; # only python>=3.6 is supported

@@ -11,7 +22,7 @@
    owner = "solokeys";
    repo = pname;
    rev = version;
-    sha256 = "05rwqrhr1as6zqhg63d6wga7l42jm2azbav5w6ih8mx5zbxf61yz";
+    sha256 = "sha256-OCiKa6mnqJGoNCC4KqI+hMw22tzhdN63x9/KujNJqcE=";
  };

  # replaced pinned fido, with unrestricted fido version
@@ -21,6 +32,7 @@

  propagatedBuildInputs = [
    click
+    cryptography
    ecdsa
    fido2
    intelhex
--- a/pkgs/development/python-modules/streamz/default.nix
+++ b/pkgs/development/python-modules/streamz/default.nix
@@ -1,4 +1,4 @@
-{ lib, buildPythonPackage, fetchPypi, fetchpatch
+{ lib, buildPythonPackage, fetchPypi
 , confluent-kafka
 , distributed
 , flaky
--- a/pkgs/development/python-modules/stytra/default.nix
+++ b/pkgs/development/python-modules/stytra/default.nix
@@ -1,4 +1,4 @@
-{ lib, pkgs, buildPythonPackage, fetchPypi, isPy3k, callPackage
+{ lib, buildPythonPackage, fetchPypi, isPy3k
 , opencv3
 , pyqt5
 , pyqtgraph
@@ -19,7 +19,7 @@
 , imageio-ffmpeg
 , av
 , nose
-, pytest
+, pytestCheckHook
 , pyserial
 , arrayqueues
 , colorspacious
@@ -37,14 +37,18 @@ buildPythonPackage rec {
    inherit pname version;
    sha256 = "aab9d07575ef599a9c0ae505656e3c03ec753462df3c15742f1f768f2b578f0a";
  };
-  doCheck = false;
+
+  # crashes python
+  preCheck = ''
+    rm stytra/tests/test_z_experiments.py
+  '';
+
  checkInputs = [
    nose
-    pytest
+    pytestCheckHook
    pyserial
  ];

-
  propagatedBuildInputs = [
    opencv3
    pyqt5
--- a/pkgs/development/python-modules/torchgpipe/default.nix
+++ b/pkgs/development/python-modules/torchgpipe/default.nix
@@ -2,7 +2,6 @@
 , buildPythonPackage
 , fetchFromGitHub
 , isPy27
-, pytest
 , pytestrunner
 , pytestCheckHook
 , pytorch
@@ -23,12 +22,11 @@ buildPythonPackage rec {

  propagatedBuildInputs = [ pytorch ];

-  checkInputs = [ pytest pytestrunner pytestCheckHook ];
-  disabledTests = [ "test_inplace_on_requires_grad" ];
-  # seems like a harmless failure:
-  ## AssertionError:
-  ## Pattern 'a leaf Variable that requires grad has been used in an in-place operation.'
-  ## does not match 'a leaf Variable that requires grad is being used in an in-place operation.'
+  checkInputs = [ pytestrunner pytestCheckHook ];
+  disabledTests = [
+    "test_inplace_on_requires_grad"
+    "test_input_requiring_grad"
+  ];

  meta = with lib; {
    description = "GPipe implemented in Pytorch and optimized for CUDA rather than TPU";
--- a/pkgs/development/python-modules/traittypes/default.nix
+++ b/pkgs/development/python-modules/traittypes/default.nix
@@ -3,10 +3,9 @@
 , fetchFromGitHub
 , fetchpatch
 , isPy27
-, pytest
+, pytestCheckHook
 , nose
 , numpy
-, scipy
 , pandas
 , xarray
 , traitlets
@@ -35,7 +34,8 @@ buildPythonPackage rec {

  propagatedBuildInputs = [ traitlets ];

-  checkInputs = [ numpy pandas xarray nose pytest ];
+  checkInputs = [ numpy pandas xarray nose pytestCheckHook ];
+  pythonImportsCheck = [ "traittypes" ];

  meta = with lib; {
    description = "Trait types for NumPy, SciPy, XArray, and Pandas";
--- a/pkgs/development/python-modules/transmission-rpc/default.nix
+++ b/pkgs/development/python-modules/transmission-rpc/default.nix
@@ -0,0 +1,36 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, six
+, typing-extensions
+, requests
+, yarl
+}:
+
+buildPythonPackage rec {
+  pname = "transmission-rpc";
+  version = "3.2.2";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "1y5048109j6z4smzwysvdjfn6cj9698dsxfim9i4nqam4nmw2wi7";
+  };
+
+  propagatedBuildInputs = [
+    six
+    typing-extensions
+    requests
+    yarl
+  ];
+
+  # no tests
+  doCheck = false;
+  pythonImportsCheck = [ "transmission_rpc" ];
+
+  meta = with lib; {
+    description = "Python module that implements the Transmission bittorent client RPC protocol";
+    homepage = "https://pypi.python.org/project/transmission-rpc/";
+    license = licenses.mit;
+    maintainers = with maintainers; [ eyjhb ];
+  };
+}
--- a/pkgs/development/python-modules/transmissionrpc/default.nix
+++ b/pkgs/development/python-modules/transmissionrpc/default.nix
@@ -1,26 +0,0 @@
-{ lib
-, buildPythonPackage
-, fetchPypi
-, six
-}:
-
-buildPythonPackage rec {
-  pname = "transmissionrpc";
-  version = "0.11";
-
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "ec43b460f9fde2faedbfa6d663ef495b3fd69df855a135eebe8f8a741c0dde60";
-  };
-
-  propagatedBuildInputs = [ six ];
-
-  # no tests
-  doCheck = false;
-
-  meta = with lib; {
-    description = "Python implementation of the Transmission bittorent client RPC protocol";
-    homepage = "https://pypi.python.org/pypi/transmissionrpc/";
-    license = licenses.mit;
-  };
-}
--- a/pkgs/development/python-modules/uproot3-methods/default.nix
+++ b/pkgs/development/python-modules/uproot3-methods/default.nix
@@ -20,6 +20,7 @@ buildPythonPackage rec {

  # No tests on PyPi
  doCheck = false;
+  pythonImportsCheck = [ "uproot3_methods" ];

  meta = with lib; {
    homepage = "https://github.com/scikit-hep/uproot3-methods";
--- a/pkgs/development/python-modules/vega/default.nix
+++ b/pkgs/development/python-modules/vega/default.nix
@@ -1,5 +1,5 @@
 { lib, buildPythonPackage , fetchPypi, pythonOlder
-, pytest, jupyter_core, pandas, ipywidgets, jupyter, altair }:
+, jupyter_core, pandas, ipywidgets, jupyter }:

 buildPythonPackage rec {
  pname = "vega";
@@ -11,12 +11,11 @@ buildPythonPackage rec {
    sha256 = "f343ceb11add58d24cd320d69e410b111a56c98c9069ebb4ef89c608c4c1950d";
  };

-  buildInputs = [ pytest ];
  propagatedBuildInputs = [ jupyter jupyter_core pandas ipywidgets ];

  # currently, recommonmark is broken on python3
  doCheck = false;
-  checkInputs = [ altair ];
+  pythonImportsCheck = [ "vega" ];

  meta = with lib; {
    description = "An IPython/Jupyter widget for Vega and Vega-Lite";
--- a/pkgs/development/python-modules/vidstab/default.nix
+++ b/pkgs/development/python-modules/vidstab/default.nix
@@ -6,7 +6,6 @@
 , imutils
 , progress
 , matplotlib
-, pytest
 }:

 buildPythonPackage rec {
@@ -18,11 +17,11 @@ buildPythonPackage rec {
    sha256 = "649a77a0c1b670d13a1bf411451945d7da439364dc0c33ee3636a23f1d82b456";
  };

-  checkInputs = [ pytest ];
  propagatedBuildInputs = [ numpy pandas imutils progress matplotlib ];

  # tests not packaged with pypi
  doCheck = false;
+  pythonImportsCheck = [ "vidstab" ];

  meta = with lib; {
    homepage = "https://github.com/AdamSpannbauer/python_video_stab";