diff --git a/nixos/modules/services/networking/knot-resolver.nix b/nixos/modules/services/networking/knot-resolver.nix
index d943b29b5b73..4aa8d47f110a 100644
--- a/nixos/modules/services/networking/knot-resolver.nix
+++ b/nixos/modules/services/networking/knot-resolver.nix
@@ -10,17 +10,17 @@ let
   configFile = pkgs.callPackage (
     {
       runCommandLocal,
-      remarshal_0_17,
+      remarshal,
       stdenv,
     }:
     runCommandLocal "knot-resolver.yaml"
       {
-        nativeBuildInputs = [ remarshal_0_17 ];
+        nativeBuildInputs = [ remarshal ];
         value = builtins.toJSON cfg.settings;
         passAsFile = [ "value" ];
       }
       ''
-        json2yaml "$valuePath" "$out"
+        remarshal --from json --to yaml-1.1 "$valuePath" "$out"
         ${
           # We skip validation if the build platform cannot execute # the binary targeting the host platform.
           lib.optionalString (stdenv.buildPlatform.canExecute stdenv.hostPlatform) ''
diff --git a/nixos/modules/services/web-apps/tabbyapi.nix b/nixos/modules/services/web-apps/tabbyapi.nix
index a955afe463b5..7c357b15551f 100644
--- a/nixos/modules/services/web-apps/tabbyapi.nix
+++ b/nixos/modules/services/web-apps/tabbyapi.nix
@@ -35,12 +35,14 @@ in
               type = lib.types.str;
               default = "127.0.0.1";
               description = "The IP to host on. Use 0.0.0.0 to expose on all network adapters.";
+              example = "0.0.0.0";
             };
 
             port = lib.mkOption {
               type = lib.types.port;
               default = 5000;
               description = "The port to host on.";
+              example = 8080;
             };
 
             disable_auth = lib.mkOption {
@@ -58,10 +60,34 @@ in
               description = "Disable fetching external content in response to requests, such as images from URLs.";
             };
 
+            send_tracebacks = lib.mkOption {
+              type = lib.types.bool;
+              default = false;
+              description = ''
+                Send tracebacks over the API.
+                NOTE: Only enable this for debug purposes.
+              '';
+            };
+
             api_servers = lib.mkOption {
               type = lib.types.listOf lib.types.str;
               default = [ "OAI" ];
               description = "Select API servers to enable. Possible values: OAI, Kobold.";
+              example = [
+                "OAI"
+                "Kobold"
+              ];
+            };
+
+            sse_ping_interval = lib.mkOption {
+              type = lib.types.ints.unsigned;
+              default = 15;
+              description = ''
+                Seconds between SSE keep-alive pings on streaming responses.
+                Pings are SSE comments, ignored by compliant clients, and prevent
+                connections from dropping during long prefills. Set to 0 to disable.
+              '';
+              example = 0;
             };
           };
 
@@ -72,6 +98,12 @@ in
               description = "Enable prompt logging.";
             };
 
+            log_generation_params = lib.mkOption {
+              type = lib.types.bool;
+              default = false;
+              description = "Enable generation parameter logging.";
+            };
+
             log_requests = lib.mkOption {
               type = lib.types.bool;
               default = false;
@@ -141,6 +173,15 @@ in
               '';
             };
 
+            use_dummy_models = lib.mkOption {
+              type = lib.types.bool;
+              default = false;
+              description = ''
+                Sends dummy model names when the models endpoint is queried.
+                Enable this if the client is looking for specific OAI models.
+              '';
+            };
+
             model_name = lib.mkOption {
               type = lib.types.nullOr lib.types.str;
               default = null;
@@ -151,6 +192,20 @@ in
               example = "Qwen3_5-9B";
             };
 
+            use_as_default = lib.mkOption {
+              type = lib.types.listOf lib.types.str;
+              default = [ ];
+              description = ''
+                Names of args to use as a fallback for API load requests.
+                For example, if you always want cache_mode to be Q4 instead of only on the
+                initial model load, add "cache_mode" to this list.
+              '';
+              example = [
+                "max_seq_len"
+                "cache_mode"
+              ];
+            };
+
             max_seq_len = lib.mkOption {
               type = lib.types.nullOr lib.types.int;
               default = null;
@@ -158,6 +213,22 @@ in
                 Max sequence length (default: min(max_position_embeddings, cache_size)).
                 Set to -1 to fetch from the model's config.json.
               '';
+              example = 32768;
+            };
+
+            cache_size = lib.mkOption {
+              type = lib.types.nullOr (
+                lib.types.addCheck lib.types.ints.positive (n: lib.mod n 256 == 0)
+                // {
+                  description = "positive integer, multiple of 256";
+                }
+              );
+              default = null;
+              description = ''
+                Size of the key/value cache to allocate, in tokens (default: 4096).
+                Must be a multiple of 256.
+              '';
+              example = 32768;
             };
 
             cache_mode = lib.mkOption {
@@ -168,6 +239,7 @@ in
                 Specify the pair k_bits,v_bits where k_bits and v_bits are integers from 2-8 (e.g. '8,8').
                 The legacy values 'FP16', 'Q8', 'Q6', 'Q4' are also accepted.
               '';
+              example = "8,8";
             };
 
             tensor_parallel = lib.mkOption {
@@ -185,6 +257,111 @@ in
               description = "Automatically allocate resources to GPUs. Not parsed for single GPU users.";
             };
 
+            autosplit_reserve = lib.mkOption {
+              type = lib.types.listOf lib.types.number;
+              default = [ 96 ];
+              description = ''
+                Reserve VRAM used for autosplit loading, as a list of MB per GPU
+                (default: 96 MB on GPU 0).
+              '';
+              example = [
+                96
+                96
+              ];
+            };
+
+            gpu_split = lib.mkOption {
+              type = lib.types.listOf lib.types.number;
+              default = [ ];
+              description = ''
+                List of VRAM sizes to split between GPUs, in GB.
+                Used with tensor parallelism.
+              '';
+              example = [
+                16
+                24
+              ];
+            };
+
+            cpu_moe_offload_layers = lib.mkOption {
+              type = lib.types.ints.unsigned;
+              default = 0;
+              description = ''
+                Number of mixture-of-expert layers to offload to CPU inference.
+                Only affects MoE models. Set a large value such as 999 to offload all layers.
+              '';
+              example = 999;
+            };
+
+            rope_scale = lib.mkOption {
+              type = lib.types.nullOr lib.types.number;
+              default = 1.0;
+              description = ''
+                Rope scale, same as compress_pos_emb.
+                Use if the model was trained on long context with rope.
+                Set to null to pull the value from the model.
+
+                NOTE: If a model has YaRN rope scaling, it will automatically be enabled by
+                ExLlama and the rope_scale and rope_alpha settings won't apply.
+              '';
+              example = 4.0;
+            };
+
+            rope_alpha = lib.mkOption {
+              type = lib.types.nullOr (lib.types.either lib.types.number (lib.types.enum [ "auto" ]));
+              default = null;
+              description = ''
+                Rope alpha, same as alpha_value. Set to "auto" to auto-calculate.
+                Leaving this null will either pull from the model or auto-calculate.
+              '';
+              example = "auto";
+            };
+
+            chunk_size = lib.mkOption {
+              type = lib.types.ints.positive;
+              default = 2048;
+              description = ''
+                Chunk size for prompt ingestion.
+                A lower value reduces VRAM usage but decreases ingestion speed.
+                NOTE: Effects vary depending on the model. An ideal value is between 512 and 4096.
+              '';
+              example = 512;
+            };
+
+            output_chunking = lib.mkOption {
+              type = lib.types.bool;
+              default = true;
+              description = ''
+                Use output chunking. Instead of allocating cache space for the entire completion
+                at once, allocate in chunks as needed. Used by EXL3 models only.
+              '';
+            };
+
+            max_batch_size = lib.mkOption {
+              type = lib.types.nullOr lib.types.ints.positive;
+              default = null;
+              description = ''
+                Set the maximum number of generation jobs that can run concurrently.
+                The default maximum batch size for transformer architectures is 32. Recurrent
+                models with linear or sliding attention use more VRAM to support larger batches,
+                so the default value is reduced to 4. If you do not require concurrency at all,
+                you can reduce it further to minimize VRAM overhead.
+              '';
+              example = 1;
+            };
+
+            prompt_template = lib.mkOption {
+              type = lib.types.nullOr lib.types.str;
+              default = null;
+              description = ''
+                Set the prompt template for this model.
+                If null, attempts to look for the model's chat template.
+                If a model contains multiple templates in its tokenizer_config.json,
+                set this to the name of the template you want to use.
+                NOTE: Only works with chat completion message lists!
+              '';
+            };
+
             dummy_model_names = lib.mkOption {
               type = lib.types.listOf lib.types.str;
               default = [ "gpt-3.5-turbo" ];
@@ -192,6 +369,10 @@ in
                 A list of fake model names that are sent via the /v1/models endpoint.
                 Also used as bypasses for strict mode if inline_model_loading is true.
               '';
+              example = [
+                "gpt-3.5-turbo"
+                "gpt-4"
+              ];
             };
 
             vision = lib.mkOption {
@@ -200,6 +381,34 @@ in
               description = "Enables vision support if the model supports it.";
             };
 
+            template_vars_default = lib.mkOption {
+              type = lib.types.attrsOf lib.types.anything;
+              default = { };
+              description = ''
+                Default chat template variables. Merged into the template variables of every
+                chat completion request; values sent by the client (template_vars /
+                chat_template_kwargs, or the top-level reasoning_effort field) take precedence.
+                Use for model-specific reasoning knobs.
+              '';
+              example = {
+                enable_thinking = true;
+              };
+            };
+
+            template_vars_force = lib.mkOption {
+              type = lib.types.attrsOf lib.types.anything;
+              default = { };
+              description = ''
+                Forced chat template variables. Like template_vars_default, but these override
+                any values sent by the client.
+                Replaces the deprecated force_enable_thinking option, which is still accepted
+                as an alias for { enable_thinking = true; }.
+              '';
+              example = {
+                reasoning_effort = "high";
+              };
+            };
+
             reasoning = lib.mkOption {
               type = lib.types.bool;
               default = false;
@@ -220,7 +429,243 @@ in
               default = "</think>";
               description = "The end token for reasoning content.";
             };
+
+            start_in_reasoning = lib.mkOption {
+              type = lib.types.enum [
+                "auto"
+                "always"
+                "never"
+              ];
+              default = "auto";
+              description = ''
+                Whether generation starts inside a reasoning block.
+                "auto" guesses by scanning the end of the templated prompt for an unclosed
+                reasoning start token.
+              '';
+              example = "always";
+            };
+
+            tool_calls_in_reasoning = lib.mkOption {
+              type = lib.types.bool;
+              default = true;
+              description = ''
+                Parse tool calls that occur inside reasoning content.
+                If false, tool call tags inside a reasoning block are treated as plain
+                reasoning text.
+              '';
+            };
+
+            tool_format = lib.mkOption {
+              type = lib.types.nullOr lib.types.str;
+              default = null;
+              description = ''
+                Tool format, e.g. "qwen3_coder". See upstream docs for supported formats.
+                If null, tool calls from the model will not be parsed by the server.
+              '';
+              example = "qwen3_coder";
+            };
+
+            harmony = lib.mkOption {
+              type = lib.types.nullOr lib.types.bool;
+              default = null;
+              description = ''
+                Parse responses in the Harmony message format (gpt-oss models).
+                Auto-detected from the model's special tokens when null; set to true or false
+                to override. Setting tool_format to "harmony" is equivalent to setting this to
+                true. When active, supersedes the reasoning and tool format settings.
+              '';
+            };
           };
+
+          draft_model = {
+            draft_mode = lib.mkOption {
+              type = lib.types.enum [
+                "model"
+                "disabled"
+                "mtp"
+                "ngram"
+              ];
+              default = "model";
+              description = ''
+                Drafting mode for exllamav3.
+                In "model" mode, drafting is disabled if no draft_model_name is provided.
+              '';
+              example = "ngram";
+            };
+
+            draft_model_dir = lib.mkOption {
+              type = lib.types.str;
+              default = "models";
+              description = "Directory to look for draft models. Relative to the state directory.";
+              example = "drafts";
+            };
+
+            draft_model_name = lib.mkOption {
+              type = lib.types.nullOr lib.types.str;
+              default = null;
+              description = ''
+                An initial draft model to load.
+                Ensure the model is in the draft model directory.
+              '';
+              example = "Qwen3-0.6B-exl3";
+            };
+
+            draft_rope_scale = lib.mkOption {
+              type = lib.types.nullOr lib.types.number;
+              default = 1.0;
+              description = ''
+                Rope scale for draft models, same as compress_pos_emb.
+                Use if the draft model was trained on long context with rope.
+              '';
+              example = 4.0;
+            };
+
+            draft_rope_alpha = lib.mkOption {
+              type = lib.types.nullOr lib.types.number;
+              default = null;
+              description = ''
+                Rope alpha for draft models, same as alpha_value.
+                Leaving this null will either pull from the model or auto-calculate.
+              '';
+              example = 2.0;
+            };
+
+            draft_cache_mode = lib.mkOption {
+              type = lib.types.enum [
+                "FP16"
+                "Q8"
+                "Q6"
+                "Q4"
+              ];
+              default = "FP16";
+              description = ''
+                Cache mode for draft models to save VRAM.
+                Unlike the model's cache_mode, this does not accept a k_bits,v_bits pair.
+              '';
+              example = "Q8";
+            };
+
+            draft_gpu_split = lib.mkOption {
+              type = lib.types.listOf lib.types.number;
+              default = [ ];
+              description = ''
+                List of VRAM sizes to split between GPUs, in GB.
+                If this is empty, the draft model is autosplit.
+              '';
+              example = [
+                2
+                2
+              ];
+            };
+
+            draft_num_tokens = lib.mkOption {
+              type = lib.types.nullOr lib.types.ints.positive;
+              default = null;
+              description = ''
+                Number of tokens to draft per iteration (default: draft model default).
+                Recurrent (linear or sliding attention) models use more VRAM for longer drafts.
+                This overhead multiplies with the max batch size, so for models with long drafts
+                (e.g. DFlash with 15 tokens by default) shorter drafts may be preferable.
+              '';
+              example = 4;
+            };
+
+            dynamic_draft = lib.mkOption {
+              type = lib.types.bool;
+              default = false;
+              description = ''
+                Adjust number of draft tokens dynamically based on observed acceptance rates.
+                Ceiling is given by draft_num_tokens.
+              '';
+            };
+
+            ngram_match_min = lib.mkOption {
+              type = lib.types.ints.positive;
+              default = 2;
+              description = ''
+                Minimum match length for exllamav3 n-gram drafting.
+                Only used when draft_mode is "ngram".
+              '';
+              example = 3;
+            };
+          };
+
+          sampling = {
+            override_preset = lib.mkOption {
+              type = lib.types.nullOr lib.types.str;
+              default = null;
+              description = ''
+                Select a sampler override preset, found in the sampler-overrides folder.
+                This overrides default fallbacks for sampler values that are passed to the API.
+                NOTE: "safe_defaults" is noob friendly and provides fallbacks for frontends that
+                don't send sampling parameters. Leave this null for any advanced usage.
+              '';
+              example = "safe_defaults";
+            };
+          };
+
+          lora = {
+            lora_dir = lib.mkOption {
+              type = lib.types.str;
+              default = "loras";
+              description = "Directory to look for LoRAs. Relative to the state directory.";
+            };
+
+            loras = lib.mkOption {
+              type = lib.types.listOf (
+                lib.types.submodule {
+                  options = {
+                    name = lib.mkOption {
+                      type = lib.types.str;
+                      description = "Name of the LoRA directory inside lora_dir.";
+                    };
+
+                    scaling = lib.mkOption {
+                      type = lib.types.number;
+                      default = 1.0;
+                      description = "Scaling factor for this LoRA.";
+                    };
+                  };
+                }
+              );
+              default = [ ];
+              description = "List of LoRAs to load and associated scaling factors.";
+              example = [
+                {
+                  name = "lora1";
+                  scaling = 1.0;
+                }
+              ];
+            };
+          };
+
+          memory = {
+            sysmem_recurrent_cache = lib.mkOption {
+              type = lib.types.ints.unsigned;
+              default = 4096;
+              description = "Max size of recurrent cache in system memory, in MB.";
+              example = 8192;
+            };
+
+            sysmem_kv_cache = lib.mkOption {
+              type = lib.types.ints.unsigned;
+              default = 0;
+              description = "Size of system memory second-tier key/value cache, in MB.";
+              example = 4096;
+            };
+
+            cuda_malloc_async = lib.mkOption {
+              type = lib.types.bool;
+              default = true;
+              description = ''
+                Use the cudaMallocAsync backend in Torch.
+                Enabling this is generally preferable, but it may cause issues with certain
+                workloads. Try disabling it if you experience intermittent OoM errors. If false,
+                Torch will use the allocator defined by the system environment.
+              '';
+            };
+          };
+
         };
       };
     };
@@ -236,6 +681,14 @@ in
             services.tabbyapi.package = pkgs.pkgsCuda.tabbyapi;
         '';
       }
+      {
+        assertion = !(cfg.settings.model ? force_enable_thinking);
+        message = ''
+          services.tabbyapi.settings.model.force_enable_thinking is deprecated upstream.
+          Use template_vars_force instead:
+            services.tabbyapi.settings.model.template_vars_force.enable_thinking = true;
+        '';
+      }
     ];
     networking.firewall.allowedTCPPorts = lib.mkIf cfg.openFirewall [
       cfg.settings.network.port
diff --git a/nixos/modules/system/boot/stage-1.nix b/nixos/modules/system/boot/stage-1.nix
index 08ab6bec05a1..ea395f307647 100644
--- a/nixos/modules/system/boot/stage-1.nix
+++ b/nixos/modules/system/boot/stage-1.nix
@@ -206,6 +206,7 @@ let
         if [ -z "${toString (pkgs.stdenv.hostPlatform != pkgs.stdenv.buildPlatform)}" ]; then
         # Make sure that the patchelf'ed binaries still work.
         echo "testing patched programs..."
+        set -x
         $out/bin/ash -c 'echo hello world' | grep "hello world"
         $out/bin/mount -V 2>&1 | grep -q "mount from util-linux"
         $out/bin/blkid -V 2>&1 | grep -q 'libblkid'
@@ -218,6 +219,7 @@ let
         ''}
 
         ${config.boot.initrd.extraUtilsCommandsTest}
+        set +x
         fi
       ''; # */
 
diff --git a/nixos/tests/web-apps/dashy.nix b/nixos/tests/web-apps/dashy.nix
index d83c14d3294f..d54b08d60b3a 100644
--- a/nixos/tests/web-apps/dashy.nix
+++ b/nixos/tests/web-apps/dashy.nix
@@ -18,7 +18,7 @@ let
     ];
   };
 
-  customSettingsYaml = (pkgs.formats.yaml_1_1 { }).generate "custom-conf.yaml" customSettings;
+  customSettingsYaml = (pkgs.formats.yaml_1_2 { }).generate "custom-conf.yaml" customSettings;
 in
 {
   name = "dashy";
diff --git a/pkgs/applications/editors/vscode/extensions/default.nix b/pkgs/applications/editors/vscode/extensions/default.nix
index b92e5abea499..d4dcf8a7c136 100644
--- a/pkgs/applications/editors/vscode/extensions/default.nix
+++ b/pkgs/applications/editors/vscode/extensions/default.nix
@@ -1174,8 +1174,8 @@ let
         mktplcRef = {
           publisher = "DanielSanMedium";
           name = "dscodegpt";
-          version = "3.24.29";
-          hash = "sha256-E/B1YiTc2RR/dh3QpYTO/bgzFldYQfuM/tZ650nJYJA=";
+          version = "3.24.39";
+          hash = "sha256-r1XkER09s+38uCbUxK9MM5bHRNp3UnMj6VJCHUMZM1Q=";
         };
         meta = {
           changelog = "https://marketplace.visualstudio.com/items/DanielSanMedium.dscodegpt/changelog";
@@ -1760,8 +1760,8 @@ let
         mktplcRef = {
           name = "foam-vscode";
           publisher = "foam";
-          version = "0.44.4";
-          hash = "sha256-YMNYT/QDcg25fG2fidbFOU41RBIk/l49Se5ca4AyMe8=";
+          version = "0.44.5";
+          hash = "sha256-MiQ1Ze0vW0JCfmKVFe6eAWBbHhZqDKtRhhiQMkBgRe4=";
         };
         meta = {
           changelog = "https://marketplace.visualstudio.com/items/foam.foam-vscode/changelog";
diff --git a/pkgs/applications/networking/cluster/terraform-providers/providers.json b/pkgs/applications/networking/cluster/terraform-providers/providers.json
index 3b4038913926..2d172e847f87 100644
--- a/pkgs/applications/networking/cluster/terraform-providers/providers.json
+++ b/pkgs/applications/networking/cluster/terraform-providers/providers.json
@@ -36,13 +36,13 @@
     "vendorHash": "sha256-Ii0NfdkAxD9CGKUOzg1T9r0LsNajHBTfEY9GNBxxngc="
   },
   "akamai_akamai": {
-    "hash": "sha256-AYvC8s8OKwlwF8eDoCsuOhOanCwbn/5u/vGumee6FNg=",
+    "hash": "sha256-XGTdfOUr3Nb2vV49aGZThuae/n9KrM3NZ8A0P/LrSXg=",
     "homepage": "https://registry.terraform.io/providers/akamai/akamai",
     "owner": "akamai",
     "repo": "terraform-provider-akamai",
-    "rev": "v10.3.0",
+    "rev": "v10.4.0",
     "spdx": "MPL-2.0",
-    "vendorHash": "sha256-031RZo1EqWrt79NvdrrZ9FW/E+mfwkGmr7wyMYX4SHg="
+    "vendorHash": "sha256-DTPaRkNWitoriOE0G+RctMIHAdSPK4wq410a+XxLnOY="
   },
   "aliyun_alicloud": {
     "hash": "sha256-es2ti8tSgShwUWYtZ7OEff88LLiAnK4B/Hq9PaNEEOc=",
@@ -535,11 +535,11 @@
     "vendorHash": null
   },
   "hashicorp_azurerm": {
-    "hash": "sha256-M8Kq0lVbPtob2g8j8k4OJenAz8f5jjSobf192TrpSEg=",
+    "hash": "sha256-iskhDSt6pjQjdiqhlVd7PmOewTduOxRL9KWPoIHKLLU=",
     "homepage": "https://registry.terraform.io/providers/hashicorp/azurerm",
     "owner": "hashicorp",
     "repo": "terraform-provider-azurerm",
-    "rev": "v4.81.0",
+    "rev": "v5.0.1",
     "spdx": "MPL-2.0",
     "vendorHash": null
   },
diff --git a/pkgs/applications/networking/irc/weechat/default.nix b/pkgs/applications/networking/irc/weechat/default.nix
index aacea71aedf9..73c8763b5de5 100644
--- a/pkgs/applications/networking/irc/weechat/default.nix
+++ b/pkgs/applications/networking/irc/weechat/default.nix
@@ -105,11 +105,11 @@ assert lib.all (p: p.enabled -> !(builtins.elem null p.buildInputs)) plugins;
 
 stdenv.mkDerivation rec {
   pname = "weechat";
-  version = "4.9.5";
+  version = "4.10.0";
 
   src = fetchurl {
     url = "https://weechat.org/files/src/weechat-${version}.tar.xz";
-    hash = "sha256-OzlGEE5kU20GAjcKMOVd1aMBzI/0IBhP8KEBkm2tHRY=";
+    hash = "sha256-w6fnxqVAHd6aRtAmT6RKowMsqYqoZBDEVNPeXGlQXFQ=";
   };
 
   # Why is this needed? https://github.com/weechat/weechat/issues/2031
diff --git a/pkgs/applications/virtualization/docker/compose.nix b/pkgs/applications/virtualization/docker/compose.nix
index d4a785417e24..bd3751b5d19d 100644
--- a/pkgs/applications/virtualization/docker/compose.nix
+++ b/pkgs/applications/virtualization/docker/compose.nix
@@ -6,16 +6,16 @@
 }:
 buildGoModule rec {
   pname = "docker-compose";
-  version = "5.3.1";
+  version = "5.4.0";
 
   src = fetchFromGitHub {
     owner = "docker";
     repo = "compose";
     tag = "v${version}";
-    hash = "sha256-UNORlxZ/b4Jrp9v8pbsxTt8PrYq1/u4AjBU8+pfuG1k=";
+    hash = "sha256-BLApJ1RWI2nUM3EDFLWBPwIbT+wUUCqxCRjc7QlkFd4=";
   };
 
-  vendorHash = "sha256-Ug6/hpuHgJ2CAUX87/+Tt3cHm4AbJF9oznx61kTVKI4=";
+  vendorHash = "sha256-NCHNe+aLNsJNtKdgQxyL6cMuu9XxA5ycleHf9gToEks=";
 
   nativeInstallCheckInputs = [ versionCheckHook ];
 
diff --git a/pkgs/applications/window-managers/hyprwm/hyprland-plugins/hypr-darkwindow.nix b/pkgs/applications/window-managers/hyprwm/hyprland-plugins/hypr-darkwindow.nix
index 74b57dd395e6..c165932cf0b4 100644
--- a/pkgs/applications/window-managers/hyprwm/hyprland-plugins/hypr-darkwindow.nix
+++ b/pkgs/applications/window-managers/hyprwm/hyprland-plugins/hypr-darkwindow.nix
@@ -7,7 +7,7 @@
 
 mkHyprlandPlugin (finalAttrs: {
   pluginName = "hypr-darkwindow";
-  version = "0.56.0";
+  version = "0.56.1";
 
   src = fetchFromGitHub {
     owner = "micha4w";
diff --git a/pkgs/build-support/bintools-wrapper/darwin-install_name_tool-wrapper.sh b/pkgs/build-support/bintools-wrapper/darwin-install_name_tool-wrapper.sh
deleted file mode 100755
index 376a7abfe41c..000000000000
--- a/pkgs/build-support/bintools-wrapper/darwin-install_name_tool-wrapper.sh
+++ /dev/null
@@ -1,49 +0,0 @@
-#! @shell@
-# shellcheck shell=bash
-
-set -eu -o pipefail +o posix
-shopt -s nullglob
-
-if (( "${NIX_DEBUG:-0}" >= 7 )); then
-    set -x
-fi
-
-source @signingUtils@
-
-extraAfter=()
-extraBefore=()
-params=("$@")
-
-input=
-
-pprev=
-prev=
-for p in \
-    ${extraBefore+"${extraBefore[@]}"} \
-    ${params+"${params[@]}"} \
-    ${extraAfter+"${extraAfter[@]}"}
-do
-    if [ "$pprev" != "-change" ] && [[ "$prev" != -* ]] && [[ "$p" != -* ]]; then
-        input="$p"
-    fi
-    pprev="$prev"
-    prev="$p"
-done
-
-# Optionally print debug info.
-if (( "${NIX_DEBUG:-0}" >= 1 )); then
-    # Old bash workaround, see above.
-    echo "extra flags before to @prog@:" >&2
-    printf "  %q\n" ${extraBefore+"${extraBefore[@]}"}  >&2
-    echo "original flags to @prog@:" >&2
-    printf "  %q\n" ${params+"${params[@]}"} >&2
-    echo "extra flags after to @prog@:" >&2
-    printf "  %q\n" ${extraAfter+"${extraAfter[@]}"} >&2
-fi
-
-@prog@ \
-    ${extraBefore+"${extraBefore[@]}"} \
-    ${params+"${params[@]}"} \
-    ${extraAfter+"${extraAfter[@]}"}
-
-sign "$input"
diff --git a/pkgs/build-support/bintools-wrapper/darwin-strip-wrapper.sh b/pkgs/build-support/bintools-wrapper/darwin-strip-wrapper.sh
deleted file mode 100755
index a67699547a6f..000000000000
--- a/pkgs/build-support/bintools-wrapper/darwin-strip-wrapper.sh
+++ /dev/null
@@ -1,78 +0,0 @@
-#! @shell@
-# shellcheck shell=bash
-
-set -eu -o pipefail +o posix
-shopt -s nullglob
-
-if (( "${NIX_DEBUG:-0}" >= 7 )); then
-    set -x
-fi
-
-source @signingUtils@
-
-extraAfter=()
-extraBefore=()
-params=("$@")
-
-output=
-inputs=()
-
-restAreFiles=
-prev=
-for p in \
-    ${extraBefore+"${extraBefore[@]}"} \
-    ${params+"${params[@]}"} \
-    ${extraAfter+"${extraAfter[@]}"}
-do
-    if [ "$restAreFiles" ]; then
-        inputs+=("$p")
-    else
-        case "$prev" in
-            -s|-R|-d|-arch)
-                # Unrelated arguments with values
-                ;;
-            -o)
-                # Explicit output
-                output="$p"
-                ;;
-            *)
-                # Any other orgument either takes no value, or is a file.
-                if [[ "$p" != -* ]]; then
-                    inputs+=("$p")
-                fi
-                ;;
-        esac
-
-        if [ "$p" == - ]; then
-            restAreFiles=1
-        fi
-    fi
-
-    prev="$p"
-done
-
-# Optionally print debug info.
-if (( "${NIX_DEBUG:-0}" >= 1 )); then
-    # Old bash workaround, see above.
-    echo "extra flags before to @prog@:" >&2
-    printf "  %q\n" ${extraBefore+"${extraBefore[@]}"}  >&2
-    echo "original flags to @prog@:" >&2
-    printf "  %q\n" ${params+"${params[@]}"} >&2
-    echo "extra flags after to @prog@:" >&2
-    printf "  %q\n" ${extraAfter+"${extraAfter[@]}"} >&2
-fi
-
-@prog@ \
-    ${extraBefore+"${extraBefore[@]}"} \
-    ${params+"${params[@]}"} \
-    ${extraAfter+"${extraAfter[@]}"}
-
-if [ "$output" ]; then
-    # Single explicit output
-    signIfRequired "$output"
-else
-    # Multiple inputs, rewritten in place
-    for input in "${inputs[@]}"; do
-      signIfRequired "$input"
-    done
-fi
diff --git a/pkgs/build-support/writers/test.nix b/pkgs/build-support/writers/test.nix
index e39681865ab2..996aaa01e9af 100644
--- a/pkgs/build-support/writers/test.nix
+++ b/pkgs/build-support/writers/test.nix
@@ -477,7 +477,11 @@ recurseIntoAttrs {
 
     yaml = expectDataEqual {
       file = writeYAML "data.yaml" { hello = "world"; };
-      expected = "hello: world\n";
+      expected = ''
+        %YAML 1.1
+        ---
+        hello: world
+      '';
     };
   };
 
diff --git a/pkgs/by-name/ac/actual-server/missing-hashes.json b/pkgs/by-name/ac/actual-server/missing-hashes.json
index 9b2f64c6f2bb..891b358c55cb 100644
--- a/pkgs/by-name/ac/actual-server/missing-hashes.json
+++ b/pkgs/by-name/ac/actual-server/missing-hashes.json
@@ -1,56 +1,56 @@
 {
   "@esbuild/aix-ppc64@npm:0.25.12": "b2cc7e0cd348bc315907f6ce090ee545d4157a19fc44327ff0262ba9296f0fad19c57dd679b1b526a0a18f34f1971b128e15b41bca794c74a9b2c32238fdd537",
-  "@esbuild/aix-ppc64@npm:0.27.2": "9c18cc2e4a03339a55013aac05b4a3fc4b77e75715dc252d034aa3d43b754abc053a7601b95e31249f4b6e69b68db2f5e6cb04b0ed619f825f2f70daff1a78d7",
+  "@esbuild/aix-ppc64@npm:0.28.1": "98a9325bec976ebe1cbbf2441fdbe895b36733919b9df7d62e7b73a1e199810affeac17d172cc5cf61196c9b1ede8073ca5d088ca52b14800b76f49bacc480b3",
   "@esbuild/android-arm64@npm:0.25.12": "f770937988ec42e289277abc03800ccf88902684dbda3013a8ab274bb9eca36d35619a75f0f0510e225bdb4c7cf9a426218c7d2641a98fed74287a52d60d8865",
-  "@esbuild/android-arm64@npm:0.27.2": "a318fc9ffcdad7fda8bb521af8b17f73d93d9a94b4cca9301fbf72cf3f5a6e945edd589a47388de70f3e9582655dcf5b5bb928a11e306368fae4a9106d5143d2",
+  "@esbuild/android-arm64@npm:0.28.1": "ec3e3c62bc684a09393ca10a0f64b166938f66e4b1972f6db63bf55463bf039736549d9808e50996eb0fedea70744b466aeb816c44e78f2b5d232aeb9929e3ac",
   "@esbuild/android-arm@npm:0.25.12": "7a5d507aa717d85470c595e11f3c03fbf4f0bffdd10d30f49e1a3f14c2553191f156b214eacd6911fa36719faef23c28be7d88ac876ec300995987964ea16e99",
-  "@esbuild/android-arm@npm:0.27.2": "01114275e096b9177ad2496730087ee081d6e65a75bc087457b527c5baac5a8ccb362435f45232532bf6f97de95e1790dbce127d55abd5e4152c7214682bf4d3",
+  "@esbuild/android-arm@npm:0.28.1": "cda56884826ac2aa5dd3be5df9e89834df3b46515cf14099ddfc5bcfc80122d4f8d74b3831a0ac447d87dda73ae90fba49dc4e352b11240c2b055cdca69a0a02",
   "@esbuild/android-x64@npm:0.25.12": "cd459b0433b0541bae9ffafd274c57529125719a5b78f4ee92aa9f8a1f54b002a18d889bee19084a503c114412269ef4e740d21b4a2de811ec2a076e96b35f48",
-  "@esbuild/android-x64@npm:0.27.2": "e92c5b6919081a14c8882f1167cf90b4e4bba745ad6e9a23428f85a1cd5e79dfa3f1d2fc943686b237e4cd09fac52ad3b3791deab6a0419ee10859284d3834aa",
+  "@esbuild/android-x64@npm:0.28.1": "7f2ba14ba06fd3f2faff467e6fceb2466cd44d1d6039ae1c01f24336a5a1ad0f9c3721000331ded3f250587e4be5e7194d68dd33c55339dc26e1200e13e16d2d",
   "@esbuild/darwin-arm64@npm:0.25.12": "067f4588b9b64c93742c4a8cec35282dd076583006ce8089aae3095fcae5b606a2f60d86caf0527be6009be234178fb83d360af82698e2017a6f9fb9345e084d",
-  "@esbuild/darwin-arm64@npm:0.27.2": "5e99db5037167bad4a095fc445b94a2ce02357870ed58b79e13ae6bc09b5cb33d7e03f925492df940f9e0ad685a889f02beec1431d8fbf4c7ced55b2f48f5659",
+  "@esbuild/darwin-arm64@npm:0.28.1": "9798bd013921f8dc5126eb12eba4ddfce9198d11eba6ae844f66d25919d5d26be2aa46b4da8d442ad0e7673e88b2f3d9e505d71692cd030bda9a7b762921c05d",
   "@esbuild/darwin-x64@npm:0.25.12": "c29947d07adacadcb29092860b69d1b668d9c5abfaf525e2a7f3ece61c3f4e72a95c1c66ad0e80fbf31d01210ae4e8330d4ae6d9c6c9ad2b8aa159eb115f9a8d",
-  "@esbuild/darwin-x64@npm:0.27.2": "87f2fbc4cf11724ef805b17cbdc7b0a9498332bc4b61d55e110ecc3b09bc488b88c0bd140ea48924e9c97a2063cf7e440fef13dd56e415c46799619d61086910",
+  "@esbuild/darwin-x64@npm:0.28.1": "aaddefac25e025e309c71dc5c7074d8c295f44779e41add06dbf65d48b2a6a72b579266748e7f0ab3b2be1ed07be8d541e954f75dda2a2992f36f4c805d91fe1",
   "@esbuild/freebsd-arm64@npm:0.25.12": "c51691aeb04e41c554a59cbb5ab8d917446f352aeec70e3d5a7f25409e9115ff2db930589052df3e7d60f03eff4c298bda89db62f2408d1a49b6a70e69c5d4a0",
-  "@esbuild/freebsd-arm64@npm:0.27.2": "1ffa23243b913e377a5b09fd97ad9f089be3695aafdd893b60bb7f9be479256d8b7546f0bc96c4e61133fe7aeeaf95a8e941e82a65d99008ff82c99bdec85eee",
+  "@esbuild/freebsd-arm64@npm:0.28.1": "a325b7833f978b62bf25157ea5a951e29b9b0a1db9665ee52498644c9b250977ab6f21c049137d0a271bb0442b3e6d6148c257bace84476196b46570ce837d62",
   "@esbuild/freebsd-x64@npm:0.25.12": "9b84c48176350811690751c34d1513005290641923a161f96cb433cbcbb8c072ecb92cef39ba641f48032071f74c6119e5f081b5788242109426c54f3ef1a01e",
-  "@esbuild/freebsd-x64@npm:0.27.2": "44f744b289cf9e115b0adfac1905818d756dfced14213bf144d9016d96f67575ef2a55526f76e29ee775fcfec7274ba3a5e6833f35ed79a4592d3f5eac278267",
+  "@esbuild/freebsd-x64@npm:0.28.1": "f092ddacd0bc715f443b62382dd8ba8f85d272f62caa47f603e85b9c5b14fef67c610523006ca88cae19e2829fe41a2a0ae92b7c158ef1038c714552dea57554",
   "@esbuild/linux-arm64@npm:0.25.12": "1e9cc29569890f5944e7dbe2e597eb19d76e85fe07aef6253129b16800ccb5b33a79cea17873d7debdf681d34adf77e06ae99742fe06cab095f3db441b741b1e",
-  "@esbuild/linux-arm64@npm:0.27.2": "2b037d74eaff4e9b5a6076760ede873320707636a3495939687cdd0c2c7150883111273bc0a8663fa305c42f439f4748b5ad7f15a1a1ea9fa7db575d9faf2d1b",
+  "@esbuild/linux-arm64@npm:0.28.1": "bfda225d3101bb3ed5a74f979d50564a17ccf3799ad65fb968c5b15c9ceb9077c105a9bb5763d42f33f1917ac709e5779cd2112e5420188963568e80ac8439f8",
   "@esbuild/linux-arm@npm:0.25.12": "fcf091d6a51834c9a942ee33b568342990c7fa29d2ff338ce628a41bc415696d09bca7ef502c2b04518973010f73ab3d13e37096030db9c8d393ab29408f104b",
-  "@esbuild/linux-arm@npm:0.27.2": "28cfc3a9ca11fc899649e7a706fb4b2ee57999bd92e86c23726b3ed0f832732411dd0aa3e2bcdb4105759f83bc4e5adc98dc195aaafce736c910db4e43694702",
+  "@esbuild/linux-arm@npm:0.28.1": "b440cf89adf6dd1079bcf7d9aa915f70f467002bbb69bda21f4a3d160c9ae93bc6d8eb73b2831c8607fb1527d8ada288d907440e36969cb60000e4df85b7c549",
   "@esbuild/linux-ia32@npm:0.25.12": "ccd563c3189e5f651b479dd80d3bebd9d5c4747ce7448bb80266c804c3141eb3514b8c70445d77301899c54c1ff8c74614f8423704fde475a5c67efe86713235",
-  "@esbuild/linux-ia32@npm:0.27.2": "ac6cc92b9be2ec6d9d483c53fc973e6381765b784a2e1b71fa93ea0cf976344c2e3e0bfda0140b0829b3ec4304d9b886692b2891e68c17d2121066d06e67f0ac",
+  "@esbuild/linux-ia32@npm:0.28.1": "4329d81cf06331e537c8ebb571a9d4ca968811bee7c7cb4f975b8343c9f7649a8b2b9902b0974be0e2224656b1a0d21f3b191304db8cec52d006b80061faf4c2",
   "@esbuild/linux-loong64@npm:0.25.12": "6df2710d99d84006ad8151a9ca26861dbb97524a15e61f56eb1a5a76786865ad03be838fe3d414a72b239262364964528f3136c2965b3c442c7ed85090b145c4",
-  "@esbuild/linux-loong64@npm:0.27.2": "625f5b6c2218a3acb2cff8f7f02a53ca89d13925f8932260ddad01595c6907beda4a79e4b767b1101f5971049f88d3ec6ab29cf565b4d61d9b0d7277e2cb578d",
+  "@esbuild/linux-loong64@npm:0.28.1": "76b4d0f2cf716576181065e3fd2d6ffa9b0d0c39987e8d3d1b8d1e8aaa2563779cd4f861c881e3e7a9302f2d03d5543b8f726a99603e6aa754c8154772d0f434",
   "@esbuild/linux-mips64el@npm:0.25.12": "883bd8c4afd70b8e372db8a6bdb429d419ae30253a63987ff824994958d8431b6e51ead05e6372b2a233e025ea57f6f65b04ebaff8308e39acf54bfa73a5cae2",
-  "@esbuild/linux-mips64el@npm:0.27.2": "0c62692cb3a297b37212dfde52a861861843a716f6b3bdb73da49ba249a4c001b989ea61dc4540c430fac59ce2f8fc45035cdfac80172c5ddaf1b9df8471aecf",
+  "@esbuild/linux-mips64el@npm:0.28.1": "59825a73d04187818c6fb53b22e2915a4c0e6c8fee9017d75dcafbdc66699f2765377faf801495d69952230935557f58360481a7edd78073816270aa8bd0cbee",
   "@esbuild/linux-ppc64@npm:0.25.12": "71f8544a3b99b4c95d49604b66d144e9617ae9925914c1bd5bc6731d15d4e48e7f8e9bffd85835e1c93a88c3537b53f3e99b500e4dd2533af9483055b02f9d38",
-  "@esbuild/linux-ppc64@npm:0.27.2": "b804d2dd0a6a85fe1c731828c725731a55ab120d2cc16941d560b2e9af5c2ec51586914ce26a84a326a9d46fa61eb8bb1f843953fe29ddd43b3f3099c491b5ff",
+  "@esbuild/linux-ppc64@npm:0.28.1": "3186d54b33d9b4849d6fe4fa2aeed4966a4117f9a27bf2d59f07f3ea651a9724a2eb9aaaf98813aac6dc726710a337bfc2472dd714262894fabf498a369fbd74",
   "@esbuild/linux-riscv64@npm:0.25.12": "fe8048262c5c6a040c047a9b7ab8547b0e7a32ce50f622ea8dadc3ec22065676efbc9b36896ca96959f77839757319633a2d05af5f2de7b32389a03b80f027f1",
-  "@esbuild/linux-riscv64@npm:0.27.2": "03e67e7207a83801363e3637f9a35fb6224ed4dc23bbf6eca41904fc42f5a6806e1e591666bf48dbf62eba97d41ff4355413b14dcb2339007b22c693374c49f6",
+  "@esbuild/linux-riscv64@npm:0.28.1": "f01572cf6398b466d44bfa68dbc5f56a37b74e645673198f7ba157d215ccba35ea46e220a2526008d5679cef47a4368dd46480d4ba4c7330a491d215fe3f649f",
   "@esbuild/linux-s390x@npm:0.25.12": "e5c023be1dfd75c915453763f944db8ab3da4f60a00c2b0e6f3b9349bc6c51e5ac5ce928db56e8f316e910213adf2172efd1b37abe070f6cda0c28583d770bab",
-  "@esbuild/linux-s390x@npm:0.27.2": "eb24b9c0a4a1492e4ff34a87933f6a3b348739c12f864b408144efdf949871c1fbb02a1cca741bfa11fd08aebe585d046fd3311b462ce4c795e3064ba3912469",
+  "@esbuild/linux-s390x@npm:0.28.1": "aad20d457c0441d7bf2f6c8dbe74297d4c3a3c90cf709a971a4a19b2c70497bf91ac4a80fa6168ccf6063eb284ea0f41f2293283e8351348369af551ffe6f3cf",
   "@esbuild/linux-x64@npm:0.25.12": "8b2c7f5e00c40058f5c150df267cd303eae5907822f196902cd8e64af70475e800a7f132ac6388aa2b77b877d6314147e67f3fb67d97c867adccd54a2a6caaf6",
-  "@esbuild/linux-x64@npm:0.27.2": "ed1542f203329521fb1f308696c76ba59ed4a4616a24e21bf4820685362bba209d5c44c2f4e66c88dc7b7399df9ace625454d4829ee529d076ccaf61566e11cf",
+  "@esbuild/linux-x64@npm:0.28.1": "d361ac73388af397803dc26242265c8f00fce91d9dd587b04d230c686294585c541f43dee706e23f8d56754e3a3da653b00b3f55855182d60deabc024acf19f7",
   "@esbuild/netbsd-arm64@npm:0.25.12": "19bc5a1295697aa8787929472323494302d117ea1e592f17cfae443525c1e5917a5f77e6582fc1ec9de3a11a9e296bc12749c6b12cde0aab10695b5c25f29f73",
-  "@esbuild/netbsd-arm64@npm:0.27.2": "576dd082047077b9cc41fbeffd728821a4f3b80969c1d2d6c274301122c6de2050f484fd4e946777527b8a15bd2a5ac54f85ca7ab95ea72b5345177e6a888687",
+  "@esbuild/netbsd-arm64@npm:0.28.1": "73e2d620958bcb61367849046397dee40dbd9bd6d0d4172bb87ef90ad644ed16e48386debd1ef0323648358fc617c0d8fae58be984774a2e8622712c7ab7f04b",
   "@esbuild/netbsd-x64@npm:0.25.12": "8eb2ff51aa39b43a021e4b51411789b6299fd0dc38b3896719684333e32fd42ed4508ab67dcc88435631e5333573a4848dbfeec12569de46c2318dcdb39ad3ab",
-  "@esbuild/netbsd-x64@npm:0.27.2": "f8994af3e2ff3c9a91e874e58698b66e6f8d4e72dbc0aaf749b74a79420954146ed053359b0a4c213918582cee187d8a371737a33cfb93e624b4d091e5a6c240",
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@@ -200,36 +181,36 @@
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-  "@rolldown/binding-freebsd-x64@npm:1.0.3": "d6c401dfa68b6840a9a56e879198267ce8406f16108679caf6e6eb709c8ee0f2641c55d250b51ce47097000626c604bee7e7e2d9e2d70f71109b38e35fe4b836",
-  "@rolldown/binding-freebsd-x64@npm:1.1.1": "32fcac299ac43b09dfc17e478e7d0b13af742ef38dda5c4b41a5289c0b54479aca8e1c17982a8e5aa9f9a8ee8650bd145c0ac0f71ff3e19409063edb5d3504ef",
-  "@rolldown/binding-linux-arm-gnueabihf@npm:1.0.3": "8843aad46237e6a0569196eb605e29afaaf449c06ca4ed1a02e8083c86264f7cc940b085aafe6349f2011b2a44f6dfa8d58b55803e09561f12ea110bd3cb53ff",
-  "@rolldown/binding-linux-arm-gnueabihf@npm:1.1.1": "b9354e847db640142a757470c3017253ec4f8ce65cf118bfe2e437fea5f30aaea98d7e416d04a8c8a2763f777fe20e982dfa2dc4cba2d498de050d03b7141515",
-  "@rolldown/binding-linux-arm64-gnu@npm:1.0.3": "dc34425af444478f539854b02683b14ceef88520634a1dfefbc12c6a2c403c9879c8697ff87188aef199d692508d1109d69f545d6cc3414bd409202fd7f5ca1c",
-  "@rolldown/binding-linux-arm64-gnu@npm:1.1.1": "7dfcf379e0a37fc31a5ec908be9a7821d58f5f93bc7a7d2c0209eb4c7908e4f0e1b6c3ec65619ce60b779019f3a75eafa61558667fd7e101cbeea20d143b6476",
-  "@rolldown/binding-linux-arm64-musl@npm:1.0.3": "f04750497d329d71e17b86cacbc64cc78c7bf8eea0653f40a12f6b07e0baf70054feb8418538937ebb7e909f3b8a730f34e06370d6dc9188a4ea00fd3a947545",
-  "@rolldown/binding-linux-arm64-musl@npm:1.1.1": "b558ea9c6a420be7ad757ee05c77c86107915930396b100ae6b687fc4a4aac2cb01603c8678674472f98d1c3c96a025f930b61ba8921065f2770a0b1bc3a1ef9",
-  "@rolldown/binding-linux-ppc64-gnu@npm:1.0.3": "289963b6842c40d2a30457d6da2b824ecf4e502ae85e3ca7f48c45071b94a0759e327df7687b6930e418c71f7e6716ba43d061dcb9ff30e330708b4031b521eb",
-  "@rolldown/binding-linux-ppc64-gnu@npm:1.1.1": "f3269b611a8fe5b940ba9e233216f699fe5e04663cb51bd7ae6b2e6f2a3da00368851e9c4b159b2c52b029fc194768365afb808d85262fe97d3c819c988737b9",
-  "@rolldown/binding-linux-s390x-gnu@npm:1.0.3": "df6ef349cc8a8b8a6089726627f0c0db089ea57a4980bed6fae5e0246cdbbd2dbfa4e322ad90493a685ad895b21dfd982ebbebee159a7e50e873eabdc52fca8a",
-  "@rolldown/binding-linux-s390x-gnu@npm:1.1.1": "d6e516087d3dadbc14aa5e603985acb5db40f30968238d7c331a6165880f5851f4969bda1f7e8100f119d90bf6172d26f3f1987a68c7a471552be569000e6deb",
-  "@rolldown/binding-linux-x64-gnu@npm:1.0.3": "5d8faa3524898d23161a79ba6ad6fdeac8774c1a15c876a0eaadce582bcc584ec463ac8c2d685de509d04098202b67c8dfad515fcf0a614542af2b4260909597",
-  "@rolldown/binding-linux-x64-gnu@npm:1.1.1": "1126f59382a45e2b25754f9f834b66fb0cbba08b6cdc3fe88d63cfae56c7b753a995483c834326645963705f196fa710e9d1a2f5af7eaff6cfb39bd4afb0decf",
-  "@rolldown/binding-linux-x64-musl@npm:1.0.3": "a0cbdbba526790dd69f8de7810a90ee944f4a920f01326cff331702527b4dbf1377afd1dd9d65ded169f12fb3a1f0ec6d77c931a27e03cafcab453b2bfd3c317",
-  "@rolldown/binding-linux-x64-musl@npm:1.1.1": "6733c08cde69e0c471fb61d1ea9a128063da40612a1f028da325949800c9d1ea49bdae7eacbffb5fe95bbe1a651fef6f3f2466774e639a0016ad04bec3296f7c",
-  "@rolldown/binding-openharmony-arm64@npm:1.0.3": "ab0ca503f2b342e25f466dc65bd35d509ff629996086f480fefdfc7e54c0958d8f51daf51204a485f3c23b1405c824387524dd83a634f5a1304bf0c4722e0995",
-  "@rolldown/binding-openharmony-arm64@npm:1.1.1": "b977df43a86cd2a84a02cc857da9449b6ad1d98b59b6a951efce880672eef4f4d41547e71fc180d33d7cb452c40ee999d882a66568ffceba693342d3cea51dce",
-  "@rolldown/binding-wasm32-wasi@npm:1.0.3": "f540fdaebd7747dc436271fb8e22a60d08deac0b125e02f63cf0fd29cc0d228969d6ee6d49e150d9fd4f8bcd24795c116f86949bedce3cff505402ab2f4455a2",
-  "@rolldown/binding-wasm32-wasi@npm:1.1.1": "8d2b40ee92ccd7bb368cf73469825a36d00f0fd29b47fd895699efb1a1ecdb616f9459076e99b4c2d5f9e5ecf3f072405b8f2488c4392505749beef57f6ba4ef",
-  "@rolldown/binding-win32-arm64-msvc@npm:1.0.3": "b85acf5cd1065ae5260ebd43586eea6dca66675b8346fe42a14c3a95e46943f290684b36cf359c0f01c38256558e819c74571945c13adfcbdc6238ef018ad877",
-  "@rolldown/binding-win32-arm64-msvc@npm:1.1.1": "d3b31389f7354b0589fb7b1b2d4aabc76508ae6ac85648567792b32c66d80a683ced8ee02af9165f3fcfe0fa094996f69f3a1ea37c2d1d5b404c0f83ca890934",
-  "@rolldown/binding-win32-x64-msvc@npm:1.0.3": "d76ebc4fb315deddce845b82eaa07eedf88bb5f9500fa50d241805055dea593ddfcbd762d59116f35ecd6b4bcef3dba5e513180e8d9301486eac272904ce91cf",
-  "@rolldown/binding-win32-x64-msvc@npm:1.1.1": "6e7cea53c2d7c5d14479dad8b1dfb29d761ac4a1eee34e4a0afaef470afa7e8aeb4442f127b25ca5763597902d3a26e21f431d6676d5d45088b0ae8c47e56ccf",
+  "@rolldown/binding-android-arm64@npm:1.1.5": "c3922a72e09e0230ab7b395bf573dd1eb9fada069b45118bdafe3c558ad8a3f90dffd214bf6710c9b73d9485a98aeaa133a755a3862652c6cbbfa0394c86c2ef",
+  "@rolldown/binding-android-arm64@npm:1.2.0": "ff8fc14f88216c2b7e701ff34abc72fd7940a8973eec13cf51dade2a18c19fd1278b5c1bda8949b7a7861f3f743e86e69ec2c56adf70ac481b1a735467a5f66a",
+  "@rolldown/binding-darwin-arm64@npm:1.1.5": "50842b58a4103e84e72a5e009a9232e8943c8e0cd1fd061bac1376fd173f22d6545ff2fdebdc1b9cdec0943e84d3e8ccbd94aa629fce2e9a7dc5212ef8e8b23b",
+  "@rolldown/binding-darwin-arm64@npm:1.2.0": "a446a643950faa2f376fb4212dde3cdf302c3ac5fc18f67e60981be4d9b01563afba2208639c349c0f9fae71c1e48b2630384c96dfbd5e9b96b5a0ca43ce08da",
+  "@rolldown/binding-darwin-x64@npm:1.1.5": "0ad12792b186ea8088ef4a275e43c76ef1217a6d57a0f86c5bc50f7279735e713e5e02173a77b7be313d307fad6b4ca733ee9ad691c7882497d57211010bb469",
+  "@rolldown/binding-darwin-x64@npm:1.2.0": "24a7e1453390691f6c123019a69147bb88cb9bc569dc6b51f39212ff7263098560abc4bbc44afb8eac37a03e2c3bbd9f25478541e2ed230c887e747c089cda6b",
+  "@rolldown/binding-freebsd-x64@npm:1.1.5": "bb8f54069382fa58d621be517373d7ab860eccd70bc6a8eebde90c97ef2615532d9f0eaf2f203ed87541ec8c85ee1c735c22f68c861c37ecb762f2991207a80e",
+  "@rolldown/binding-freebsd-x64@npm:1.2.0": "063da8483f1ff3c78888ea6fa186225df4bd3d6420c99c03b353436c2e6b69bcc3d5863f63c3460ce24668bc2da19af5181fa8ba3dd9929df9150a7780f3318c",
+  "@rolldown/binding-linux-arm-gnueabihf@npm:1.1.5": "8b806cfbdcbb134a1f223d3d5a8e770452cefe84c3f9d43b1605e2775eaf60260c18f1ff66b2f1c7f30d88481fdbcfd41c2ed0ecc5f9e5cebca70064ded263e0",
+  "@rolldown/binding-linux-arm-gnueabihf@npm:1.2.0": "2d1da49fc7de8b63df25b0e6a1016d53602f93db1deb2903784f75fb6b1701048f710e304313ff931792ba12c22206df756cb85ef596a6f8a2a732d6af85f522",
+  "@rolldown/binding-linux-arm64-gnu@npm:1.1.5": "bef8dba97e612afb18218f0b8c341b687ba17b4e241f8575d7c42e94cabdeb89c52881e6dab668b329b4267ccaf45cc64ccf65f57a5cdbb4af5e0cc6a561d09a",
+  "@rolldown/binding-linux-arm64-gnu@npm:1.2.0": "f897abd7551543f835145cffaa329362f64b71dab40861aa03037b188151fb939aa10f0f9bb34f91c178b1011459746be400b7604368cba1dbd5918af52f63b0",
+  "@rolldown/binding-linux-arm64-musl@npm:1.1.5": "e4bc793d61823160c6ae9c7f8eda2b4f4e002b1115607037285902ea4215d51e07787166087abd73d2bcc0034a3d1e225eb8821afcb90a8093cfb14ff88ed925",
+  "@rolldown/binding-linux-arm64-musl@npm:1.2.0": "eb9b31cbf7dbc3a034193b76e96f526b609983740cec5db26fc0374cc746551dc5ca5987d56664d0711ed77a5f8ed0264584e8631e8546afba492b2eeb603a50",
+  "@rolldown/binding-linux-ppc64-gnu@npm:1.1.5": "fe0ad9df136998bb3331505bf61b434414e51cbd9c012c1eabd8d698e5dd253889052a26f144b7297810d0e61113cac7d2e1d23cee3eec47c2d92ba68a4dd9b7",
+  "@rolldown/binding-linux-ppc64-gnu@npm:1.2.0": "c5ec77089e53948030cec2bb97cd2eae47e1a0fa1761dfc4c934ff500d62d7ad592fb49033d4cd28774cef7ccc5990dee141bf95c1dfa02199c5bc2c2c470d0e",
+  "@rolldown/binding-linux-s390x-gnu@npm:1.1.5": "859fb9809f9c5cb05cd31e08337a7e9f1c98e4a8a0b2500a52e284412f49dc725b19a29f2ddc3d6d682cb614d2b54049545560026eeb6091e07a83539bc777b7",
+  "@rolldown/binding-linux-s390x-gnu@npm:1.2.0": "e3552f555dfe4f940a0ee6fc3561d2f8401ae3958dff08a3244fc29c9da16e8b25a45cebc1ca6aa73cee822faf321cecc206eb3c83f6a15af2ba0cc422501690",
+  "@rolldown/binding-linux-x64-gnu@npm:1.1.5": "4bda45d9446e6227c59fab2b72930d34a5dcc0443ac779d4f50bdd3773fe031cc6df82a8f583d592dde0c01311eaf8362073cf547398591786bfa9167be42f53",
+  "@rolldown/binding-linux-x64-gnu@npm:1.2.0": "d0dc9e49efbc9fce585c405825c3d3565a5e6f1bf87ce1d2f404b9e1a752304bf333ccec503f57c4336656626d1e34a92d91999fe09c6e9cefbbdd543b084354",
+  "@rolldown/binding-linux-x64-musl@npm:1.1.5": "80edebc0dfe8126b0eb591e215f88e90521dd9ee92232ab8c53647796eeb9b5108bfdafaf9b3d4ac28a1dd3d1bd7257891b29b9fab0ef98908f5920832592a2e",
+  "@rolldown/binding-linux-x64-musl@npm:1.2.0": "2dd11b2034f34e77ae191c97d92d31c1ac0938cb8c6688c635792ea1298d77cf5e68eaf848962dabd97d983e2e1cecfb7f7d9be721aea9f90c064aa9e6793820",
+  "@rolldown/binding-openharmony-arm64@npm:1.1.5": "e2fae6cfe4d453ca6caac1a2246fe1024eb369d2310666cab5afe9745a5afc3cffd2a0310be8c8256bb2953df811c5e0a4870dd27a8b7c1167312136deceec31",
+  "@rolldown/binding-openharmony-arm64@npm:1.2.0": "9d1d4a478cbd3fda636877a061bc84dda6690c73a4f767562d9a9cf7739cd086b68c9b9ff4587bc3c75edcb93cfcb7125946e436190d72e81991489eb672ce01",
+  "@rolldown/binding-wasm32-wasi@npm:1.1.5": "76b5952fff32a964a5e2f2a470e2562e641736e5f726fbdbe26ec3344816526c19681fda0a4b8b730be4e802513aac9c8f5a167698211ace023bfaa553be6a93",
+  "@rolldown/binding-wasm32-wasi@npm:1.2.0": "edd735c6924cb47b3ccb91a50412b8e86f12a756846c9c700f9e9d72f48f39b54d5be64e96002f6ecafb5c7626e27f7ac399446b62e0d09ef7fdef62ed14e049",
+  "@rolldown/binding-win32-arm64-msvc@npm:1.1.5": "027bc08bc246800ba24405b173ab9240e6e42b8f128ac21d45eb544aa628eb136306d9f7b7c46e66d186bf70da6aec10e0f7ab6865e578790285ce58ea738dbf",
+  "@rolldown/binding-win32-arm64-msvc@npm:1.2.0": "4c4e753bdfdd6e2dc054d4ac8654602c7db46c967b7c9e90e01bb14352b16bd3cf155dcaf517fd4c825e3ab786eaba3b098a3d68449d19466fe863af52bbc791",
+  "@rolldown/binding-win32-x64-msvc@npm:1.1.5": "57e762d5ddf73df7eb146544d6b9fc809b4297338e4de1560fddccb117a785ebea82d3bce6fced522a38e90ba57eae47fc3deffc18cd6eca65efffb71491f829",
+  "@rolldown/binding-win32-x64-msvc@npm:1.2.0": "36e63cf5f0782ed48e9cf452bef7e6c0e3d06ef2a4bf752581e3c02013d65eecd9241f9dad2a71e901c5a52b4ea57ffcbb0d500007c9bc9c326e7774816ff5e5",
   "@rollup/rollup-android-arm-eabi@npm:4.61.1": "fd5cd7af9a2046adba5537f304ce3655cbe260ef5b362ac618223c0bbe1a28751077daf86c087cb5b3955ab19881ac2a79ead2f3e5122b284f43ff9228db2124",
   "@rollup/rollup-android-arm64@npm:4.61.1": "be6b2f5f56f41e540ebb73640ca0d370e530d54bf0c18920e22ec5f6671780d3c6a4235d2257b06189aefd6e26962aeb93f8c4a2fc94f9b3dd4ca2137f40cd68",
   "@rollup/rollup-darwin-arm64@npm:4.61.1": "29ccb594a4430bdc3ea218d1bdb46f88e1a905a54be392149fb362041c6970a916a6dfc87205933fd7eb4ef28be59b1e5404e6bae668722437c09e84a31a7392",
diff --git a/pkgs/by-name/ac/actual-server/package.nix b/pkgs/by-name/ac/actual-server/package.nix
index d0d4ebb7270e..ed081679146a 100644
--- a/pkgs/by-name/ac/actual-server/package.nix
+++ b/pkgs/by-name/ac/actual-server/package.nix
@@ -15,13 +15,13 @@
 let
   nodejs = nodejs_22;
   yarn-berry = yarn-berry_4.override { inherit nodejs; };
-  version = "26.7.0";
+  version = "26.8.0";
   src = fetchFromGitHub {
     name = "actualbudget-actual-source";
     owner = "actualbudget";
     repo = "actual";
     tag = "v${version}";
-    hash = "sha256-KePWt08rAhLZUrgyN7tdFUQXR/5y0TvakReji4eMwxg=";
+    hash = "sha256-AHifM1g0SAb3NzvCq1J5FVhWcA0wU/WufCFxnOjYpc8=";
   };
   translations = fetchFromGitHub {
     name = "actualbudget-translations-source";
@@ -29,8 +29,8 @@ let
     repo = "translations";
     # Note to updaters: this repo is not tagged, so just update this to the Git
     # tip at the time the update is performed.
-    rev = "c26df422b50745085191721b1f078664daac947d";
-    hash = "sha256-u3EVA8J0VCLPafidGHhDiySB2fQdibntN+6FfErQi70=";
+    rev = "f5a3541768632052e2e2039f977e3dc608ef0b60";
+    hash = "sha256-NTEStwU6UzbrGpYoEosbwstoQAXvZYqgK2HCF6Jf6Ak=";
   };
 
 in
@@ -41,12 +41,6 @@ stdenv.mkDerivation (finalAttrs: {
   ];
   sourceRoot = "${src.name}/";
 
-  patches = [
-    # Remove after upstream updates to Yarn 4.14
-    # https://github.com/actualbudget/actual/blob/master/package.json#L123
-    ./yarn-4.14-support.patch
-  ];
-
   nativeBuildInputs = [
     yarn-berry
     nodejs
@@ -71,6 +65,9 @@ stdenv.mkDerivation (finalAttrs: {
   __darwinAllowLocalNetworking = true;
 
   postPatch = ''
+    # We bring our own yarn
+    sed -i '/yarnPath:/d' .yarnrc.yml
+
     ln -sv ../../../${translations.name} ./packages/desktop-client/locale
 
     patchShebangs --build ./bin ./packages/*/bin
@@ -114,8 +111,8 @@ stdenv.mkDerivation (finalAttrs: {
 
   missingHashes = ./missing-hashes.json;
   offlineCache = yarn-berry.fetchYarnBerryDeps {
-    inherit (finalAttrs) src missingHashes patches;
-    hash = "sha256-eZxQAf2AfNd+0wrSEmE9kg5XWdqhE3Dlf6OGc1bZhXA=";
+    inherit (finalAttrs) src missingHashes;
+    hash = "sha256-wYBRDhf1lu1xiNdWh7jXM2Ecimj/aETI863G0PlFLRU=";
   };
 
   pname = "actual-server";
diff --git a/pkgs/by-name/ac/actual-server/yarn-4.14-support.patch b/pkgs/by-name/ac/actual-server/yarn-4.14-support.patch
deleted file mode 100644
index 36a538d849e4..000000000000
--- a/pkgs/by-name/ac/actual-server/yarn-4.14-support.patch
+++ /dev/null
@@ -1,32 +0,0 @@
-diff --git a/.yarnrc.yml b/.yarnrc.yml
-index 597597bbc..0ff5d2399 100644
---- a/.yarnrc.yml
-+++ b/.yarnrc.yml
-@@ -6,11 +6,12 @@ enableTransparentWorkspaces: false
- 
- nodeLinker: node-modules
- 
--yarnPath: .yarn/releases/yarn-4.13.0.cjs
-+approvedGitRepositories:
-+  - "**"
- 
- # Secure default: don't run postinstall scripts.
- # If a new package requires them, add it to dependenciesMeta in package.json.
--enableScripts: false
-+enableScripts: true
- 
- # Supply-chain defense: don't install package versions published less than 3
- # days ago, giving the community time to catch compromised releases. Trusted
-diff --git a/yarn.lock b/yarn.lock
-index 479cebb2c..9d78fba85 100644
---- a/yarn.lock
-+++ b/yarn.lock
-@@ -2,7 +2,7 @@
- # Manual changes might be lost - proceed with caution!
- 
- __metadata:
--  version: 8
-+  version: 9
-   cacheKey: 10
- 
- "7zip-bin@npm:~5.2.0":
diff --git a/pkgs/by-name/al/aligator/package.nix b/pkgs/by-name/al/aligator/package.nix
index cef4597e0a37..cacad509d7e8 100644
--- a/pkgs/by-name/al/aligator/package.nix
+++ b/pkgs/by-name/al/aligator/package.nix
@@ -6,14 +6,9 @@
   nix-update-script,
   stdenv,
 
-  # nativeBuildInputs
-  doxygen,
-  cmake,
-  graphviz,
-  pkg-config,
-
   # buildInputs
   fmt,
+  jrl-cmakemodules,
   mimalloc,
 
   # propagatedBuildInputs
@@ -57,15 +52,11 @@ stdenv.mkDerivation (finalAttrs: {
 
   strictDeps = true;
 
-  nativeBuildInputs = [
-    doxygen
-    cmake
-    graphviz
-    pkg-config
-  ];
+  nativeBuildInputs = jrl-cmakemodules.docsNativeBuildInputs;
 
   buildInputs = [
     fmt
+    jrl-cmakemodules
     mimalloc
   ]
   ++ lib.optionals stdenv.hostPlatform.isDarwin [
@@ -82,7 +73,7 @@ stdenv.mkDerivation (finalAttrs: {
     gbenchmark
   ];
 
-  cmakeFlags = [
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags ++ [
     (lib.cmakeBool "BUILD_PYTHON_INTERFACE" false)
     (lib.cmakeBool "BUILD_WITH_PINOCCHIO_SUPPORT" true)
     (lib.cmakeBool "BUILD_CROCODDYL_COMPAT" true)
diff --git a/pkgs/by-name/ar/arity/package.nix b/pkgs/by-name/ar/arity/package.nix
new file mode 100644
index 000000000000..89c88c7d0c5e
--- /dev/null
+++ b/pkgs/by-name/ar/arity/package.nix
@@ -0,0 +1,53 @@
+{
+  lib,
+  rustPlatform,
+  fetchFromGitHub,
+  installShellFiles,
+  versionCheckHook,
+  nix-update-script,
+}:
+
+rustPlatform.buildRustPackage (finalAttrs: {
+  pname = "arity";
+  version = "0.13.0";
+
+  __structuredAttrs = true;
+
+  src = fetchFromGitHub {
+    owner = "jolars";
+    repo = "arity";
+    tag = "v${finalAttrs.version}";
+    hash = "sha256-PveNcJisds0obKzUDzZ409kinWvhFO8qpvwCzhfdla8=";
+  };
+
+  cargoHash = "sha256-7Mvw9reJFmBPs8Ksn/mbSbeizdT8GhwvXT06NMlCXxc=";
+
+  nativeBuildInputs = [
+    installShellFiles
+  ];
+
+  nativeInstallCheckInputs = [
+    versionCheckHook
+  ];
+  doInstallCheck = true;
+
+  postInstall = ''
+    installShellCompletion --cmd arity \
+      --bash target/completions/arity.bash \
+      --fish target/completions/arity.fish \
+      --zsh target/completions/_arity
+
+    installManPage target/man/*
+  '';
+
+  passthru.updateScript = nix-update-script { };
+
+  meta = {
+    description = "Language server, formatter, and linter for R";
+    homepage = "https://arity.cc";
+    changelog = "https://github.com/jolars/arity/blob/${finalAttrs.src.tag}/CHANGELOG.md";
+    license = lib.licenses.mit;
+    maintainers = [ lib.maintainers.jolars ];
+    mainProgram = "arity";
+  };
+})
diff --git a/pkgs/by-name/au/aurulent-sans/package.nix b/pkgs/by-name/au/aurulent-sans/package.nix
index 6ffa590a1c8f..62d438afb654 100644
--- a/pkgs/by-name/au/aurulent-sans/package.nix
+++ b/pkgs/by-name/au/aurulent-sans/package.nix
@@ -2,33 +2,31 @@
   lib,
   stdenvNoCC,
   fetchFromGitHub,
+  installFonts,
 }:
 
-stdenvNoCC.mkDerivation rec {
+stdenvNoCC.mkDerivation (finalAttrs: {
   pname = "aurulent-sans";
   version = "0.1";
 
+  __structuredAttrs = true;
+  strictDeps = true;
+
   src = fetchFromGitHub {
     owner = "deepfire";
     repo = "hartke-aurulent-sans";
-    rev = "${pname}-${version}";
+    tag = "aurulent-sans-${finalAttrs.version}";
     hash = "sha256-M/duhgqxXZJq5su9FrsGjZdm+wtO5B5meoDomde+GwY=";
   };
 
-  installPhase = ''
-    runHook preInstall
-
-    install -Dm644 *.otf -t $out/share/fonts
-
-    runHook postInstall
-  '';
+  nativeBuildInputs = [ installFonts ];
 
   meta = {
     description = "Aurulent Sans";
-    longDescription = "Aurulent Sans is a humanist sans serif intended to be used as an interface font.";
+    longDescription = "Aurulent Sans is a humanist sans serif intended to be used as an interface font";
     homepage = "http://delubrum.org/";
     maintainers = with lib.maintainers; [ pancaek ];
     license = lib.licenses.ofl;
     platforms = lib.platforms.all;
   };
-}
+})
diff --git a/pkgs/by-name/ba/bats/package.nix b/pkgs/by-name/ba/bats/package.nix
index 64b2dea84c7a..b3f58b58499d 100644
--- a/pkgs/by-name/ba/bats/package.nix
+++ b/pkgs/by-name/ba/bats/package.nix
@@ -29,13 +29,13 @@
 
 resholve.mkDerivation (finalAttrs: {
   pname = "bats";
-  version = "1.12.0";
+  version = "1.14.0";
 
   src = fetchFromGitHub {
     owner = "bats-core";
     repo = "bats-core";
     rev = "v${finalAttrs.version}";
-    hash = "sha256-5VCkOzyaUOBW+HVVHDkH9oCWDI/MJW6yrLTQG60Ralk=";
+    hash = "sha256-pUuSjXxMCFLlsTvErgerHLnaQmcA9eXuKZKRkuOGJ8k=";
   };
 
   patchPhase = ''
diff --git a/pkgs/by-name/be/bearer/package.nix b/pkgs/by-name/be/bearer/package.nix
index 05d5868f7520..e2e03a508ac7 100644
--- a/pkgs/by-name/be/bearer/package.nix
+++ b/pkgs/by-name/be/bearer/package.nix
@@ -7,16 +7,16 @@
 
 buildGoModule (finalAttrs: {
   pname = "bearer";
-  version = "2.0.2";
+  version = "2.1.0";
 
   src = fetchFromGitHub {
     owner = "bearer";
     repo = "bearer";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-oYlW9sVyoJXOqcGLcF65c+QsTNquz0Ij1HnMjAbnZZI=";
+    hash = "sha256-OUsy3DDuo1ptTtbIOEOhqfG4wlaVu1ZSKJqt9h2ZRI0=";
   };
 
-  vendorHash = "sha256-Y32HdEk+9fftDP4cttn6r3GMq3YqeyXpsRaU5ApkGa4=";
+  vendorHash = "sha256-PTyozkuRlD/VCqPqbDfdhMYHH1z3+S1X6ykPg/xP680=";
 
   subPackages = [ "cmd/bearer" ];
 
diff --git a/pkgs/by-name/bo/bottom/package.nix b/pkgs/by-name/bo/bottom/package.nix
index 8f4e6d278c1a..2f55746ae16e 100644
--- a/pkgs/by-name/bo/bottom/package.nix
+++ b/pkgs/by-name/bo/bottom/package.nix
@@ -12,16 +12,16 @@
 
 rustPlatform.buildRustPackage (finalAttrs: {
   pname = "bottom";
-  version = "0.14.6";
+  version = "0.14.7";
 
   src = fetchFromGitHub {
     owner = "ClementTsang";
     repo = "bottom";
     tag = finalAttrs.version;
-    hash = "sha256-52aUYfFm72nSG7bAlwa18kMu13i+c4myl2QfaA2YZmw=";
+    hash = "sha256-EXbj/T3wt4gph1FZ71iK0rdRZMewY3EHpOMWsCFUnc0=";
   };
 
-  cargoHash = "sha256-N+dfYORAdWAg5qUrFEgXbiRtYJpcvV1AcbLR5WiD0QI=";
+  cargoHash = "sha256-2Erh+pgZPZEmvFAtWNPqKVkQx3/hznC82M5a36cWfZY=";
 
   nativeBuildInputs = [
     autoAddDriverRunpath
diff --git a/pkgs/by-name/ca/cargo-semver-checks/package.nix b/pkgs/by-name/ca/cargo-semver-checks/package.nix
index 5f0ed6d9cde3..a4cf210527ef 100644
--- a/pkgs/by-name/ca/cargo-semver-checks/package.nix
+++ b/pkgs/by-name/ca/cargo-semver-checks/package.nix
@@ -11,16 +11,16 @@
 
 rustPlatform.buildRustPackage (finalAttrs: {
   pname = "cargo-semver-checks";
-  version = "0.49.0";
+  version = "0.50.0";
 
   src = fetchFromGitHub {
     owner = "obi1kenobi";
     repo = "cargo-semver-checks";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-dTfcpUVR3zDtNLTKG/Oj1dxVEzLuCYR3tFlCIapYJp8=";
+    hash = "sha256-tXUEWla7dUjx7eaNzKyHNg59LXr8LP+jXxkexR3vSdk=";
   };
 
-  cargoHash = "sha256-VZxaEwQqHt8LKXp/SzOUAxT6e8jvCnS7OlyxTI1rg6c=";
+  cargoHash = "sha256-rc3F104atiV+KecsNtThfFwe80jyKOFLHKn53Nhm++w=";
 
   nativeBuildInputs = [
     cmake
diff --git a/pkgs/by-name/co/coal/package.nix b/pkgs/by-name/co/coal/package.nix
index eceb6312814b..98d764680a91 100644
--- a/pkgs/by-name/co/coal/package.nix
+++ b/pkgs/by-name/co/coal/package.nix
@@ -2,14 +2,11 @@
   lib,
   stdenv,
   fetchFromGitHub,
-  cmake,
-  doxygen,
   boost,
   eigen,
   jrl-cmakemodules,
   assimp,
   octomap,
-  pkg-config,
   qhull,
   zlib,
 }:
@@ -27,15 +24,14 @@ stdenv.mkDerivation (finalAttrs: {
 
   strictDeps = true;
 
-  nativeBuildInputs = [
-    cmake
-    doxygen
-    pkg-config
+  nativeBuildInputs = jrl-cmakemodules.docsNativeBuildInputs;
+
+  buildInputs = [
+    jrl-cmakemodules
   ];
 
   propagatedBuildInputs = [
     assimp
-    jrl-cmakemodules
     octomap
     qhull
     zlib
@@ -43,7 +39,7 @@ stdenv.mkDerivation (finalAttrs: {
     eigen
   ];
 
-  cmakeFlags = [
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags ++ [
     (lib.cmakeBool "COAL_BACKWARD_COMPATIBILITY_WITH_HPP_FCL" true)
     (lib.cmakeBool "COAL_HAS_QHULL" true)
     (lib.cmakeBool "INSTALL_DOCUMENTATION" true)
diff --git a/pkgs/by-name/cr/crocoddyl/package.nix b/pkgs/by-name/cr/crocoddyl/package.nix
index da6255b7b1e1..d66f2c857466 100644
--- a/pkgs/by-name/cr/crocoddyl/package.nix
+++ b/pkgs/by-name/cr/crocoddyl/package.nix
@@ -1,16 +1,15 @@
 {
   blas,
-  cmake,
-  doxygen,
   example-robot-data,
+  jrl-cmakemodules,
   fetchFromGitHub,
+  fontconfig,
   ffmpeg,
   ipopt,
   lapack,
   llvmPackages,
   lib,
   pinocchio,
-  pkg-config,
   stdenv,
 
   withMultithread ? true,
@@ -34,11 +33,7 @@ stdenv.mkDerivation (finalAttrs: {
 
   strictDeps = true;
 
-  nativeBuildInputs = [
-    cmake
-    doxygen
-    pkg-config
-  ];
+  nativeBuildInputs = jrl-cmakemodules.docsNativeBuildInputs;
 
   propagatedBuildInputs = [
     blas
@@ -48,7 +43,10 @@ stdenv.mkDerivation (finalAttrs: {
     pinocchio
   ];
 
-  buildInputs = lib.optionals (stdenv.hostPlatform.isDarwin && withMultithread) [
+  buildInputs = [
+    jrl-cmakemodules
+  ]
+  ++ lib.optionals (stdenv.hostPlatform.isDarwin && withMultithread) [
     llvmPackages.openmp
   ];
 
@@ -56,7 +54,7 @@ stdenv.mkDerivation (finalAttrs: {
     ffmpeg
   ];
 
-  cmakeFlags = [
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags ++ [
     (lib.cmakeBool "INSTALL_DOCUMENTATION" true)
     (lib.cmakeBool "BUILD_EXAMPLES" false)
     (lib.cmakeBool "BUILD_PYTHON_INTERFACE" false)
@@ -74,6 +72,9 @@ stdenv.mkDerivation (finalAttrs: {
 
   doCheck = true;
 
+  # Fontconfig error: Cannot load default config file: No such file: (null)
+  env.FONTCONFIG_FILE = "${fontconfig.out}/etc/fonts/fonts.conf";
+
   meta = {
     description = "Crocoddyl optimal control library";
     homepage = "https://github.com/loco-3d/crocoddyl";
diff --git a/pkgs/by-name/da/dashy-ui/package.nix b/pkgs/by-name/da/dashy-ui/package.nix
index 70f4ce154563..a01e848d696a 100644
--- a/pkgs/by-name/da/dashy-ui/package.nix
+++ b/pkgs/by-name/da/dashy-ui/package.nix
@@ -11,7 +11,7 @@
   nixosTests,
   nodejs_24,
   nodejs-slim_24,
-  remarshal_0_17,
+  remarshal,
   nix-update-script,
   settings ? { },
 }:
@@ -68,7 +68,7 @@ stdenv.mkDerivation (finalAttrs: {
     yarnBuildHook
     nodejs_24
     # For yaml conversion
-    remarshal_0_17
+    remarshal
   ];
   doDist = false;
   meta = {
diff --git a/pkgs/by-name/dr/dr14_tmeter/package.nix b/pkgs/by-name/dr/dr14_tmeter/package.nix
index 921b920cc613..27696128cbec 100644
--- a/pkgs/by-name/dr/dr14_tmeter/package.nix
+++ b/pkgs/by-name/dr/dr14_tmeter/package.nix
@@ -2,22 +2,29 @@
   lib,
   fetchFromGitHub,
   python3Packages,
-  pkgs,
+  flac,
+  vorbis-tools,
+  ffmpeg,
+  faad2,
+  lame,
 }:
 
 python3Packages.buildPythonApplication {
   pname = "dr14_tmeter";
   version = "1.0.16-unstable-2025-09-27";
-  format = "setuptools";
+  pyproject = true;
+  __structuredAttrs = true;
 
   src = fetchFromGitHub {
     owner = "hboetes";
     repo = "dr14_t.meter";
     rev = "f9d62f60c30d9404d4c4b644931e76049332310c";
-    sha256 = "sha256-3z9Gi32aG6Tk9UHpfT1VqmBZpFJrlKB+NZFu3CH+18U=";
+    hash = "sha256-3z9Gi32aG6Tk9UHpfT1VqmBZpFJrlKB+NZFu3CH+18U=";
   };
 
-  propagatedBuildInputs = with pkgs; [
+  build-system = with python3Packages; [ setuptools ];
+
+  dependencies = [
     python3Packages.numpy
     python3Packages.mutagen
     flac
diff --git a/pkgs/by-name/ei/eiquadprog/package.nix b/pkgs/by-name/ei/eiquadprog/package.nix
index d454b9c1ba42..145c9051b8d4 100644
--- a/pkgs/by-name/ei/eiquadprog/package.nix
+++ b/pkgs/by-name/ei/eiquadprog/package.nix
@@ -1,12 +1,9 @@
 {
   boost,
-  cmake,
-  doxygen,
   eigen,
   fetchFromGitHub,
   jrl-cmakemodules,
   lib,
-  pkg-config,
   stdenv,
 }:
 
@@ -26,12 +23,10 @@ stdenv.mkDerivation (finalAttrs: {
     "doc"
   ];
 
-  nativeBuildInputs = [
-    cmake
-    doxygen
-    pkg-config
-    jrl-cmakemodules
-  ];
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags;
+
+  nativeBuildInputs = jrl-cmakemodules.docsNativeBuildInputs;
+  buildInputs = [ jrl-cmakemodules ];
   propagatedBuildInputs = [ eigen ];
   checkInputs = [ boost ];
 
diff --git a/pkgs/by-name/ex/example-robot-data/package.nix b/pkgs/by-name/ex/example-robot-data/package.nix
index d9a84112c608..c88c990dd961 100644
--- a/pkgs/by-name/ex/example-robot-data/package.nix
+++ b/pkgs/by-name/ex/example-robot-data/package.nix
@@ -1,10 +1,7 @@
 {
-  cmake,
-  doxygen,
   fetchFromGitHub,
   lib,
   jrl-cmakemodules,
-  pkg-config,
   stdenv,
 }:
 
@@ -26,17 +23,13 @@ stdenv.mkDerivation (finalAttrs: {
 
   strictDeps = true;
 
-  nativeBuildInputs = [
-    cmake
-    doxygen
-    pkg-config
-  ];
+  nativeBuildInputs = jrl-cmakemodules.docsNativeBuildInputs;
 
-  propagatedBuildInputs = [
+  buildInputs = [
     jrl-cmakemodules
   ];
 
-  cmakeFlags = [ (lib.cmakeBool "BUILD_PYTHON_INTERFACE" false) ];
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags ++ [ (lib.cmakeBool "BUILD_PYTHON_INTERFACE" false) ];
 
   doCheck = true;
 
diff --git a/pkgs/by-name/fa/faiss/package.nix b/pkgs/by-name/fa/faiss/package.nix
index 6d219a8eae52..934f801fba54 100644
--- a/pkgs/by-name/fa/faiss/package.nix
+++ b/pkgs/by-name/fa/faiss/package.nix
@@ -42,7 +42,7 @@ let
 in
 stdenv.mkDerivation (finalAttrs: {
   pname = "faiss";
-  version = "1.14.3";
+  version = "1.15.0";
 
   __structuredAttrs = true;
   strictDeps = true;
@@ -53,7 +53,7 @@ stdenv.mkDerivation (finalAttrs: {
     owner = "facebookresearch";
     repo = "faiss";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-lIyb+T3tvCqfIqUJ6KtubnLWYTlOt5Cz51mZmDW+AYo=";
+    hash = "sha256-cP13HRNa17KL5ZE6if8QmoyKQBLf8ckAa0bOaioEOgE=";
   };
 
   nativeBuildInputs = [
@@ -83,6 +83,11 @@ stdenv.mkDerivation (finalAttrs: {
     (lib.cmakeBool "FAISS_ENABLE_GPU" cudaSupport)
     (lib.cmakeBool "FAISS_ENABLE_PYTHON" pythonSupport)
     (lib.cmakeFeature "FAISS_OPT_LEVEL" optLevel)
+
+    # NOTE The `metal` command-line utility used to build the Metal kernels is not open-source.
+    # To build mlx with Metal support in Nix, you'd need to use one of the sandbox escape
+    # hatches which let you interact with a native install of Xcode, such as `composeXcodeWrapper`
+    (lib.cmakeBool "FAISS_ENABLE_METAL" false)
   ]
   ++ lib.optionals cudaSupport [
     (lib.cmakeFeature "CMAKE_CUDA_ARCHITECTURES" flags.cmakeCudaArchitecturesString)
diff --git a/pkgs/by-name/fa/famistudio/package.nix b/pkgs/by-name/fa/famistudio/package.nix
index 6493f8d92fbd..cef2e4d43aa0 100644
--- a/pkgs/by-name/fa/famistudio/package.nix
+++ b/pkgs/by-name/fa/famistudio/package.nix
@@ -30,13 +30,13 @@ let
 in
 buildDotnetModule (finalAttrs: {
   pname = "famistudio";
-  version = "4.5.1";
+  version = "4.5.2";
 
   src = fetchFromGitHub {
     owner = "BleuBleu";
     repo = "FamiStudio";
     tag = finalAttrs.version;
-    hash = "sha256-VbE9wdO//rAEtxHtol/4hHd9tw4berdncMjIXZvOIYE=";
+    hash = "sha256-KWICbVN2930hn3gHF2Wo/s941+yhNFy5zqV74MVoDcM=";
   };
 
   postPatch =
diff --git a/pkgs/by-name/fa/fatou/package.nix b/pkgs/by-name/fa/fatou/package.nix
new file mode 100644
index 000000000000..9e6fd85c7b18
--- /dev/null
+++ b/pkgs/by-name/fa/fatou/package.nix
@@ -0,0 +1,53 @@
+{
+  lib,
+  rustPlatform,
+  fetchFromGitHub,
+  installShellFiles,
+  versionCheckHook,
+  nix-update-script,
+}:
+
+rustPlatform.buildRustPackage (finalAttrs: {
+  pname = "fatou";
+  version = "0.6.0";
+
+  __structuredAttrs = true;
+
+  src = fetchFromGitHub {
+    owner = "jolars";
+    repo = "fatou";
+    tag = "v${finalAttrs.version}";
+    hash = "sha256-lbMT9CQV/nEfjxfnnpRDPhWmSbyD1nESp797hkWE1iA=";
+  };
+
+  cargoHash = "sha256-FOID5+PfNFFCCl5zG7NwZRwAg4KjuByjhtXRC5QUBW4=";
+
+  nativeBuildInputs = [
+    installShellFiles
+  ];
+
+  nativeInstallCheckInputs = [
+    versionCheckHook
+  ];
+  doInstallCheck = true;
+
+  postInstall = ''
+    installShellCompletion --cmd fatou \
+      --bash target/completions/fatou.bash \
+      --fish target/completions/fatou.fish \
+      --zsh target/completions/_fatou
+
+    installManPage target/man/*
+  '';
+
+  passthru.updateScript = nix-update-script { };
+
+  meta = {
+    description = "Language server, formatter, and linter for Julia";
+    homepage = "https://fatou.dev/";
+    changelog = "https://github.com/jolars/fatou/blob/${finalAttrs.src.tag}/CHANGELOG.md";
+    license = lib.licenses.mit;
+    maintainers = [ lib.maintainers.jolars ];
+    mainProgram = "fatou";
+  };
+})
diff --git a/pkgs/by-name/fe/feishu-cli/package.nix b/pkgs/by-name/fe/feishu-cli/package.nix
index 2b6b44c8209a..8bbdd285cf31 100644
--- a/pkgs/by-name/fe/feishu-cli/package.nix
+++ b/pkgs/by-name/fe/feishu-cli/package.nix
@@ -7,16 +7,16 @@
 
 buildGoModule (finalAttrs: {
   pname = "feishu-cli";
-  version = "1.37.1";
+  version = "1.38.3";
 
   src = fetchFromGitHub {
     owner = "riba2534";
     repo = "feishu-cli";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-d6hOSDjkfdIBv9T/UzRuksjKnOh0Dl4/HyBdzGSzork=";
+    hash = "sha256-wLPR7uet73JUOgXqneNAPy3Rk3/WMSnIa6zIQUXEcic=";
   };
 
-  vendorHash = "sha256-vRefU38o9Q4Q96aXoUXUggcRsfQePjlUrSsNERJH3YU=";
+  vendorHash = "sha256-JhrcuZ/FyvtUfsSq6YoYHNMjqFU/+FhxgCJ5bPtyYD8=";
 
   subPackages = [ "." ];
 
diff --git a/pkgs/by-name/fl/flux9s/package.nix b/pkgs/by-name/fl/flux9s/package.nix
index 394d996e5249..790c73a0a3d9 100644
--- a/pkgs/by-name/fl/flux9s/package.nix
+++ b/pkgs/by-name/fl/flux9s/package.nix
@@ -9,16 +9,16 @@
 }:
 rustPlatform.buildRustPackage (finalAttrs: {
   pname = "flux9s";
-  version = "0.12.0";
+  version = "1.0.0";
 
   src = fetchFromGitHub {
     owner = "dgunzy";
     repo = "flux9s";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-kwUoA5NTjJjCI3aUgpFOcDpRZbDEPCTzzsk7TxVn6K4=";
+    hash = "sha256-DpXTWnFjQ023cWEe46Qu+m200vVNnraSq7RNVcr9GxM=";
   };
 
-  cargoHash = "sha256-5UOaIbaAlBufB4BJ+ZX82xaKTQ4qDDRZWaweM8d2AOY=";
+  cargoHash = "sha256-R3dEHn6XY+6q6kZcp43T/ASGiEIqvtlORRJ9VOgW9f0=";
 
   nativeBuildInputs = [ pkg-config ];
 
diff --git a/pkgs/by-name/gh/ghqr/package.nix b/pkgs/by-name/gh/ghqr/package.nix
index 898a07dd9cf7..74d92433e817 100644
--- a/pkgs/by-name/gh/ghqr/package.nix
+++ b/pkgs/by-name/gh/ghqr/package.nix
@@ -10,17 +10,17 @@
 
 buildGoModule (finalAttrs: {
   pname = "ghqr";
-  version = "0.5.1";
+  version = "0.6.0";
   __structuredAttrs = true;
 
   src = fetchFromGitHub {
     owner = "microsoft";
     repo = "ghqr";
     tag = "v.${finalAttrs.version}";
-    hash = "sha256-cyXuBP/Uj9UdvwoV/rKWUNts44DoKnHAeOD5dzBqZBM=";
+    hash = "sha256-rfYocQRAC+0VEn9Zlh5idhHSgvb+FyK1ZRe9ICBlXuk=";
   };
 
-  vendorHash = "sha256-R/jo2Stwt9gZkJg9WfWSBTn/+3oravtE6+yh287MjDQ=";
+  vendorHash = "sha256-y0xTK9RYBXAY3P8ddQD9ktwxkNRkFqYirL7voMBk1UI=";
 
   ldflags = [
     "-s"
diff --git a/pkgs/by-name/ha/harlequin/package.nix b/pkgs/by-name/ha/harlequin/package.nix
index 26246b46aa86..4ccfc4385d78 100644
--- a/pkgs/by-name/ha/harlequin/package.nix
+++ b/pkgs/by-name/ha/harlequin/package.nix
@@ -29,14 +29,14 @@ let
 in
 python3Packages.buildPythonApplication (finalAttrs: {
   pname = "harlequin";
-  version = "2.5.2";
+  version = "2.6.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "tconbeer";
     repo = "harlequin";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-ea8fR+tsur/tIQwfUS88HvjCADv8VgEjHD7JnR44Twk=";
+    hash = "sha256-jZGQ6t6djiKK9B+R8TYMPwXKkLPk7Z+dXuUcVQuZMfU=";
   };
 
   pythonRelaxDeps = [
@@ -90,6 +90,7 @@ python3Packages.buildPythonApplication (finalAttrs: {
 
   nativeCheckInputs = with python3Packages; [
     pytest-asyncio
+    pytest-xdist
     pytestCheckHook
     versionCheckHook
     writableTmpDirAsHomeHook
@@ -117,7 +118,7 @@ python3Packages.buildPythonApplication (finalAttrs: {
   meta = {
     description = "SQL IDE for Your Terminal";
     homepage = "https://harlequin.sh";
-    changelog = "https://github.com/tconbeer/harlequin/releases/tag/v${finalAttrs.version}";
+    changelog = "https://github.com/tconbeer/harlequin/releases/tag/${finalAttrs.src.tag}";
     license = lib.licenses.mit;
     mainProgram = "harlequin";
     maintainers = with lib.maintainers; [ pcboy ];
diff --git a/pkgs/by-name/he/heimdall-proxy/package.nix b/pkgs/by-name/he/heimdall-proxy/package.nix
index c4fa3bfaed21..98f58b379f3a 100644
--- a/pkgs/by-name/he/heimdall-proxy/package.nix
+++ b/pkgs/by-name/he/heimdall-proxy/package.nix
@@ -4,7 +4,7 @@
   lib,
 }:
 let
-  version = "0.17.18";
+  version = "0.17.19";
 in
 buildGoModule {
   pname = "heimdall-proxy";
@@ -15,10 +15,10 @@ buildGoModule {
     owner = "dadrus";
     repo = "heimdall";
     tag = "v${version}";
-    hash = "sha256-XNcUn/Xr1zYEfURX1POwGdSZqdmPTA8SqRzP+4qNECE=";
+    hash = "sha256-O1qqME2k2SggvYPlqX61wQn9yeh8skqe9Fjsc/GhUPc=";
   };
 
-  vendorHash = "sha256-r2IpMllA8EDCGwz91qXhsRR2LoTqRbxPXfN6PIJWvqk=";
+  vendorHash = "sha256-85Aty7bCV7sq4CDAk7CCGQuD18P1Uj1AMO191k+YAHY=";
 
   tags = [ "sqlite" ];
 
diff --git a/pkgs/by-name/jr/jrl-cmakemodules-scripts/package.nix b/pkgs/by-name/jr/jrl-cmakemodules-scripts/package.nix
new file mode 100644
index 000000000000..2bce816b5831
--- /dev/null
+++ b/pkgs/by-name/jr/jrl-cmakemodules-scripts/package.nix
@@ -0,0 +1,35 @@
+{
+  jrl-cmakemodules,
+  python3Packages,
+}:
+python3Packages.buildPythonApplication (finalAttrs: {
+  inherit (jrl-cmakemodules) version src;
+
+  pname = "jrl-cmakemodules-scripts";
+  pyproject = true;
+
+  sourceRoot = "${finalAttrs.src.name}/v2/scripts";
+
+  build-system = [ python3Packages.setuptools ];
+
+  dependencies = [
+    python3Packages.cmake-parser
+    python3Packages.packaging
+    python3Packages.rich
+    python3Packages.ruamel-yaml
+    python3Packages.tomlkit
+  ];
+
+  nativeCheckInputs = [
+    python3Packages.pytest-mock
+    python3Packages.pytestCheckHook
+  ];
+
+  __structuredAttrs = true;
+  strictDeps = true;
+
+  meta = jrl-cmakemodules.meta // {
+    description = "Release scripting tools for JRL CMake modules";
+    mainProgram = "jrl-release";
+  };
+})
diff --git a/pkgs/by-name/jr/jrl-cmakemodules/package.nix b/pkgs/by-name/jr/jrl-cmakemodules/package.nix
index 43bbda66f170..47a037752c74 100644
--- a/pkgs/by-name/jr/jrl-cmakemodules/package.nix
+++ b/pkgs/by-name/jr/jrl-cmakemodules/package.nix
@@ -4,8 +4,32 @@
   fetchFromGitHub,
   nix-update-script,
   cmake,
+
+  # docs
+  doxygen,
+  graphviz,
+  ghostscript,
+  pdf2svg,
+  pkg-config,
+  texliveBasic,
+  writableTmpDirAsHomeHook,
+
+  # tests
+  catch2_3,
+  matio,
+  python3Packages,
+  simde,
+  suitesparse,
 }:
 
+let
+  doxygenTexlive = texliveBasic.withPackages (ps: [
+    ps.newunicodechar
+    ps.stmaryrd
+    ps.xcolor
+  ]);
+in
+
 stdenv.mkDerivation (finalAttrs: {
   pname = "jrl-cmakemodules";
   version = "2.1.0";
@@ -19,7 +43,43 @@ stdenv.mkDerivation (finalAttrs: {
 
   nativeBuildInputs = [ cmake ];
 
-  passthru.updateScript = nix-update-script { };
+  cmakeFlags = [
+    (lib.cmakeBool "JRL_CMAKEMODULES_GENERATE_API_DOC" true)
+    (lib.cmakeBool "JRL_CMAKEMODULES_BUILD_TESTS" finalAttrs.doCheck)
+  ];
+
+  doCheck = true;
+
+  checkInputs = [
+    catch2_3
+    matio
+    python3Packages.boost
+    python3Packages.nanobind
+    python3Packages.numpy
+    python3Packages.pytest
+    simde
+    suitesparse
+  ];
+
+  passthru = {
+    updateScript = nix-update-script { };
+    docsNativeBuildInputs = [
+      cmake
+      doxygen
+      doxygenTexlive
+      graphviz
+      ghostscript
+      pdf2svg
+      pkg-config
+      writableTmpDirAsHomeHook
+    ];
+    docsCmakeFlags = [
+      (lib.cmakeFeature "DOXYGEN_FORMULA_FONTSIZE" "13")
+      (lib.cmakeFeature "DOXYGEN_HTML_FORMULA_FORMAT" "svg")
+      (lib.cmakeFeature "DOXYGEN_HTML_OUTPUT" "doxygen-html")
+      (lib.cmakeBool "DOXYGEN_USE_MATHJAX" false)
+    ];
+  };
 
   meta = {
     description = "CMake utility toolbox";
diff --git a/pkgs/by-name/ka/karakeep/package.nix b/pkgs/by-name/ka/karakeep/package.nix
index 55d4e20cbc2a..3cb1de13e404 100644
--- a/pkgs/by-name/ka/karakeep/package.nix
+++ b/pkgs/by-name/ka/karakeep/package.nix
@@ -11,20 +11,20 @@
   python3,
   srcOnly,
   removeReferencesTo,
-  pnpm_9,
+  pnpm_11,
   fetchPnpmDeps,
   pnpmConfigHook,
   versionCheckHook,
 }:
 stdenv.mkDerivation (finalAttrs: {
   pname = "karakeep";
-  version = "0.32.0";
+  version = "0.33.0";
 
   src = fetchFromGitHub {
     owner = "karakeep-app";
     repo = "karakeep";
     tag = "cli/v${finalAttrs.version}";
-    hash = "sha256-P88DQi0T7tmBH7cjs8/Hz77bU0oG7u67XPoLsdePNhI=";
+    hash = "sha256-WL4M2rpbIDUTUUCuw2T5tG4VCMGZaLsWq+BCAQBa2Sc=";
   };
 
   patches = [
@@ -44,7 +44,7 @@ stdenv.mkDerivation (finalAttrs: {
     nodejs
     node-gyp
     pnpmConfigHook
-    pnpm_9
+    pnpm_11
   ];
 
   buildInputs = [
@@ -58,9 +58,9 @@ stdenv.mkDerivation (finalAttrs: {
       src
       patches
       ;
-    pnpm = pnpm_9;
-    fetcherVersion = 3;
-    hash = "sha256-aT4JPx3iYw4kw8GHXKWMnelSVT0q2S3PK8DgSCQCyKQ=";
+    pnpm = pnpm_11;
+    fetcherVersion = 4;
+    hash = "sha256-JhD1soZj8l6ZVtTOSZc1lMfWfi3R0PU/SsVHEvr50PI=";
   };
   buildPhase = ''
     runHook preBuild
diff --git a/pkgs/by-name/ka/karakeep/patches/cache-from-env-not-nix-store.patch b/pkgs/by-name/ka/karakeep/patches/cache-from-env-not-nix-store.patch
index cdae13c94a2e..6366280c44e0 100644
--- a/pkgs/by-name/ka/karakeep/patches/cache-from-env-not-nix-store.patch
+++ b/pkgs/by-name/ka/karakeep/patches/cache-from-env-not-nix-store.patch
@@ -5,10 +5,10 @@ index cba8876..c3d7c43 100644
 @@ -495,7 +495,8 @@ class ImageOptimizerCache {
          ]);
      }
-     constructor({ distDir, nextConfig }){
--        this.cacheDir = (0, _path.join)(distDir, 'cache', 'images');
+     constructor({ distDir, nextConfig, cacheHandler }){
+-        this.cacheDir = (0, _path.join)(/* turbopackIgnore: true */ distDir, 'cache', 'images');
 +        const cacheDir = process.env['NEXT_CACHE_DIR'] || (0, _path.join)(distDir, 'cache');
 +        this.cacheDir = (0, _path.join)(cacheDir, 'images');
          this.nextConfig = nextConfig;
-     }
-     async get(cacheKey) {
+         this.cacheHandler = cacheHandler;
+         // Eagerly start LRU initialization for filesystem cache
diff --git a/pkgs/by-name/ka/karakeep/patches/dont-lock-pnpm-version.patch b/pkgs/by-name/ka/karakeep/patches/dont-lock-pnpm-version.patch
index b9e5609b33f0..10e0e7d3d3cf 100644
--- a/pkgs/by-name/ka/karakeep/patches/dont-lock-pnpm-version.patch
+++ b/pkgs/by-name/ka/karakeep/patches/dont-lock-pnpm-version.patch
@@ -5,6 +5,6 @@ requirement.
 ---
 --- a/package.json
 +++ b/package.json
-@@ -40 +40 @@
--  "packageManager": "pnpm@9.15.9",
-+  "packageManager": "pnpm",
+@@ -41 +41 @@
+-  "packageManager": "pnpm@11.2.1"
++  "packageManager": "pnpm"
diff --git a/pkgs/by-name/ls/lstk/package.nix b/pkgs/by-name/ls/lstk/package.nix
index 7a3609d407b2..0be3aa2ea982 100644
--- a/pkgs/by-name/ls/lstk/package.nix
+++ b/pkgs/by-name/ls/lstk/package.nix
@@ -7,7 +7,7 @@
 }:
 buildGoModule (finalAttrs: {
   pname = "lstk";
-  version = "0.18.0";
+  version = "0.20.1";
 
   __structuredAttrs = true;
 
@@ -15,10 +15,10 @@ buildGoModule (finalAttrs: {
     owner = "localstack";
     repo = "lstk";
     tag = "v${finalAttrs.version}";
-    sha256 = "sha256-ukmz27Bq4yrJ0oNIwwG4dyy1nLrFLL8KNEJjnihvTEU=";
+    sha256 = "sha256-PL6Xqq1S4RDm0Uj5Am9UiJJJ8Q/nWszuyRXkW+Y9cCE=";
   };
 
-  vendorHash = "sha256-hia/DjlnvnjuJvTE52Twr61bDFR9Oz/gFpp94FY3pYc=";
+  vendorHash = "sha256-WiWMOudPoS3qOMs+m/pz9VYZ9OPRn3IWHxAMC6eBjtg=";
 
   excludedPackages = "test/integration";
 
diff --git a/pkgs/by-name/ma/marelle/package.nix b/pkgs/by-name/ma/marelle/package.nix
new file mode 100644
index 000000000000..86677a1b0302
--- /dev/null
+++ b/pkgs/by-name/ma/marelle/package.nix
@@ -0,0 +1,44 @@
+{
+  lib,
+  stdenvNoCC,
+  fetchFromGitLab,
+  installFonts,
+}:
+
+stdenvNoCC.mkDerivation (finalAttrs: {
+  pname = "marelle";
+  version = "1.004";
+
+  outputs = [
+    "out"
+    "webfont"
+  ];
+
+  src = fetchFromGitLab {
+    domain = "forge.apps.education.fr";
+    owner = "marelle";
+    repo = "marelle.forge.apps.education.fr";
+    tag = "v${finalAttrs.version}";
+    hash = "sha256-BNUNHQ7Vjh34CPMd+YG2aVc1ttg65LUKH0ToJ1VAw2U=";
+  };
+
+  # public/fonts/ duplicates fonts/webfonts/
+  postPatch = ''
+    rm -rf public/fonts
+  '';
+
+  nativeBuildInputs = [
+    installFonts
+  ];
+
+  strictDeps = true;
+  __structuredAttrs = true;
+
+  meta = {
+    description = "Cursive font for teaching handwritting in primary school";
+    homepage = "https://marelle.forge.apps.education.fr";
+    license = lib.licenses.ofl;
+    maintainers = with lib.maintainers; [ nim65s ];
+    platforms = lib.platforms.all;
+  };
+})
diff --git a/pkgs/by-name/mi/mim-solvers/package.nix b/pkgs/by-name/mi/mim-solvers/package.nix
index bd3ac880fd01..66c702dd4a70 100644
--- a/pkgs/by-name/mi/mim-solvers/package.nix
+++ b/pkgs/by-name/mi/mim-solvers/package.nix
@@ -1,12 +1,10 @@
 {
-  cmake,
   crocoddyl,
   ctestCheckHook,
   fetchFromGitHub,
-  fetchpatch,
+  jrl-cmakemodules,
   lib,
   llvmPackages,
-  pkg-config,
   proxsuite,
   stdenv,
   nix-update-script,
@@ -23,21 +21,19 @@ stdenv.mkDerivation (finalAttrs: {
     hash = "sha256-t21zzUo+Oiqvr3lYN9v1lCeoki3I1FWPqo3gWzM6Kdw=";
   };
 
-  nativeBuildInputs = [
-    cmake
-    pkg-config
-  ];
+  nativeBuildInputs = jrl-cmakemodules.docsNativeBuildInputs;
 
-  buildInputs = lib.optional (
-    stdenv.hostPlatform.isDarwin && crocoddyl.withMultithread
-  ) llvmPackages.openmp;
+  buildInputs = [
+    jrl-cmakemodules
+  ]
+  ++ lib.optional (stdenv.hostPlatform.isDarwin && crocoddyl.withMultithread) llvmPackages.openmp;
 
   propagatedBuildInputs = [
     crocoddyl
     proxsuite
   ];
 
-  cmakeFlags = [
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags ++ [
     (lib.cmakeBool "BUILD_PYTHON_INTERFACE" false)
     (lib.cmakeBool "BUILD_WITH_PROXSUITE" true)
     (lib.cmakeBool "BUILD_WITH_MULTITHREADS" crocoddyl.withMultithread)
diff --git a/pkgs/by-name/mo/mongodb-compass/package.nix b/pkgs/by-name/mo/mongodb-compass/package.nix
index a1789c333cfc..cb0ef2d742cb 100644
--- a/pkgs/by-name/mo/mongodb-compass/package.nix
+++ b/pkgs/by-name/mo/mongodb-compass/package.nix
@@ -52,7 +52,7 @@
 
 let
   pname = "mongodb-compass";
-  version = "1.49.10";
+  version = "1.49.12";
 
   selectSystem =
     attrs:
@@ -66,8 +66,8 @@ let
       }
     }";
     hash = selectSystem {
-      x86_64-linux = "sha256-faD8sIbnho5urBWE0btcmD7tXT8eQCNyJYzpIyI+bA4=";
-      aarch64-darwin = "sha256-HGOJPYC4+CgLQQ3BNUTNZUln5oqPkC8ewHft99LCZQ8=";
+      x86_64-linux = "sha256-syuoNZ2MmPHgTi55HioqkYQzS1LsbzcgdWoFeM+z2Rg=";
+      aarch64-darwin = "sha256-BY5EUWJdPg4OJ7+ehCb/H8dIAoJVYlJnNcSPp0r/XfA=";
     };
   };
 
@@ -119,13 +119,16 @@ in
 stdenv.mkDerivation (finalAttrs: {
   inherit pname version src;
 
-  buildInputs = lib.optionals stdenv.hostPlatform.isLinux [
-    dpkg
-    wrapGAppsHook3
-    patchelf
-  ];
+  __structuredAttrs = true;
+  strictDeps = true;
 
-  nativeBuildInputs = lib.optionals stdenv.hostPlatform.isDarwin [ unzip ];
+  nativeBuildInputs =
+    lib.optionals stdenv.hostPlatform.isLinux [
+      dpkg
+      wrapGAppsHook3
+      patchelf
+    ]
+    ++ lib.optionals stdenv.hostPlatform.isDarwin [ unzip ];
 
   dontUnpack = stdenv.hostPlatform.isLinux;
   dontFixup = stdenv.hostPlatform.isDarwin;
@@ -156,7 +159,8 @@ stdenv.mkDerivation (finalAttrs: {
       patchelf --set-rpath ${rpath}:$out/lib/mongodb-compass "$file" || true
     done
 
-    wrapGAppsHook $out/bin/mongodb-compass
+    gappsWrapperArgsHook
+    wrapGApp "$out/bin/mongodb-compass"
   '';
 
   installPhase = ''
@@ -185,6 +189,7 @@ stdenv.mkDerivation (finalAttrs: {
   meta = {
     description = "GUI for MongoDB";
     homepage = "https://github.com/mongodb-js/compass";
+    changelog = "https://github.com/mongodb-js/compass/releases/tag/v${finalAttrs.version}";
     license = lib.licenses.sspl;
     sourceProvenance = with lib.sourceTypes; [ binaryNativeCode ];
     mainProgram = "mongodb-compass";
diff --git a/pkgs/by-name/mp/mpv/scripts/videoclip.nix b/pkgs/by-name/mp/mpv/scripts/videoclip.nix
index ee75757f57e8..88f245f97540 100644
--- a/pkgs/by-name/mp/mpv/scripts/videoclip.nix
+++ b/pkgs/by-name/mp/mpv/scripts/videoclip.nix
@@ -1,38 +1,37 @@
 {
   lib,
-  fetchFromGitHub,
-  curl,
-  xclip,
-  wl-clipboard,
-  stdenv,
   buildLua,
-  unstableGitUpdater,
+  fetchFromGitHub,
+  gitUpdater,
+  stdenv,
+  curl,
+  wl-clipboard,
+  xclip,
 }:
-buildLua {
+buildLua (finalAttrs: {
   pname = "videoclip";
-  version = "0.2-unstable-2026-07-07";
+  version = "26.7.30.0";
 
   src = fetchFromGitHub {
     owner = "Ajatt-Tools";
     repo = "videoclip";
-    rev = "979bae398da7ccd70cb2fb305c371b7af9259b10";
-    hash = "sha256-k3fxSeAjRZg4J5x5IQhKGYtUqfBE4heR1KNurGTElGs=";
+    tag = "v${finalAttrs.version}";
+    hash = "sha256-4ptnF3/L3U0CDucYcd8/O5EN1mUtnor+iXLRXbiC7os=";
   };
 
-  patchPhase = ''
-    substituteInPlace platform.lua \
-    --replace \'curl\' \'${lib.getExe curl}\' \
+  postPatch = ''
+    substituteInPlace videoclip/platform.lua \
+      --replace-fail "'curl'" "'${lib.getExe curl}'"
   ''
   + lib.optionalString stdenv.hostPlatform.isLinux ''
-    --replace xclip ${lib.getExe xclip} \
-    --replace wl-copy ${lib.getExe' wl-clipboard "wl-copy"}
+    substituteInPlace videoclip/platform.lua \
+      --replace-fail '"wl-copy' '"${lib.getExe' wl-clipboard "wl-copy"}' \
+      --replace-fail '"xclip' '"${lib.getExe xclip}'
   '';
 
-  scriptPath = ".";
-  passthru.scriptName = "videoclip";
-  passthru.updateScript = unstableGitUpdater {
-    tagPrefix = "v";
-  };
+  scriptPath = "videoclip";
+
+  passthru.updateScript = gitUpdater { rev-prefix = "v"; };
 
   meta = {
     description = "Easily create videoclips with mpv";
@@ -41,4 +40,4 @@ buildLua {
     platforms = lib.platforms.all;
     maintainers = with lib.maintainers; [ BatteredBunny ];
   };
-}
+})
diff --git a/pkgs/by-name/mt/mtail/package.nix b/pkgs/by-name/mt/mtail/package.nix
index aa47f549cb5c..708f39c7333d 100644
--- a/pkgs/by-name/mt/mtail/package.nix
+++ b/pkgs/by-name/mt/mtail/package.nix
@@ -9,6 +9,7 @@
 buildGoModule (finalAttrs: {
   pname = "mtail";
   version = "3.4.6";
+  __structuredAttrs = true;
 
   src = fetchFromGitHub {
     owner = "jaqx0r";
diff --git a/pkgs/by-name/na/namespace-cli/package.nix b/pkgs/by-name/na/namespace-cli/package.nix
index fbc2880c0a4b..0829e6516e15 100644
--- a/pkgs/by-name/na/namespace-cli/package.nix
+++ b/pkgs/by-name/na/namespace-cli/package.nix
@@ -6,16 +6,16 @@
 
 buildGoModule (finalAttrs: {
   pname = "namespace-cli";
-  version = "0.0.550";
+  version = "0.0.551";
 
   src = fetchFromGitHub {
     owner = "namespacelabs";
     repo = "foundation";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-Ek6+s10KvZhPoHGBpw2k3ARBpwi1hbyChieyAxF1ac4=";
+    hash = "sha256-utBatGjHNLTT+hdYde5NIZmD7c+oS9zFl9dCyrtMx2s=";
   };
 
-  vendorHash = "sha256-hOt0ItxXUcinp8+/XiHq18kRz2heVmHKpWhNP0i4a+Y=";
+  vendorHash = "sha256-1MjkgJvn2u2zcO6lMAHdEbiGVp24D3Gv98GQZxGk27Y=";
 
   subPackages = [
     "cmd/nsc"
diff --git a/pkgs/by-name/nd/ndcurves/package.nix b/pkgs/by-name/nd/ndcurves/package.nix
index ddd3895bc4ad..42407d74e08d 100644
--- a/pkgs/by-name/nd/ndcurves/package.nix
+++ b/pkgs/by-name/nd/ndcurves/package.nix
@@ -29,34 +29,32 @@ stdenv.mkDerivation (finalAttrs: {
 
   strictDeps = true;
 
-  nativeBuildInputs = [
-    cmake
-    doxygen
-    pkg-config
-  ]
-  ++ lib.optionals pythonSupport [
-    python3Packages.python
-    python3Packages.pythonImportsCheckHook
-  ];
-  propagatedBuildInputs = [
-    jrl-cmakemodules
-  ]
-  ++ lib.optionals pythonSupport [
-    python3Packages.eigenpy
-    python3Packages.pinocchio
-  ]
-  ++ lib.optional (!pythonSupport) pinocchio;
+  buildInputs = [ jrl-cmakemodules ];
+  nativeBuildInputs =
+    jrl-cmakemodules.docsNativeBuildInputs
+    ++ lib.optionals pythonSupport [
+      python3Packages.python
+      python3Packages.pythonImportsCheckHook
+    ];
+  propagatedBuildInputs =
+    lib.optionals pythonSupport [
+      python3Packages.eigenpy
+      python3Packages.pinocchio
+    ]
+    ++ lib.optional (!pythonSupport) pinocchio;
 
-  cmakeFlags = [
-    (lib.cmakeBool "BUILD_PYTHON_INTERFACE" pythonSupport)
-    (lib.cmakeBool "CURVES_WITH_PINOCCHIO_SUPPORT" true)
-  ]
-  ++ lib.optional stdenv.hostPlatform.isAarch64 (
-    lib.cmakeFeature "CMAKE_CTEST_ARGUMENTS" "--exclude-regex;'curves_tests|python-curves'"
-  )
-  ++ lib.optional (stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isx86_64) (
-    lib.cmakeFeature "CMAKE_CTEST_ARGUMENTS" "--exclude-regex;'test-so3-smooth'"
-  );
+  cmakeFlags =
+    jrl-cmakemodules.docsCmakeFlags
+    ++ [
+      (lib.cmakeBool "BUILD_PYTHON_INTERFACE" pythonSupport)
+      (lib.cmakeBool "CURVES_WITH_PINOCCHIO_SUPPORT" true)
+    ]
+    ++ lib.optional stdenv.hostPlatform.isAarch64 (
+      lib.cmakeFeature "CMAKE_CTEST_ARGUMENTS" "--exclude-regex;'curves_tests|python-curves'"
+    )
+    ++ lib.optional (stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isx86_64) (
+      lib.cmakeFeature "CMAKE_CTEST_ARGUMENTS" "--exclude-regex;'test-so3-smooth'"
+    );
 
   doCheck = true;
 
diff --git a/pkgs/by-name/ne/newsflash/package.nix b/pkgs/by-name/ne/newsflash/package.nix
index 839f3307e9ea..6b8f0460e2db 100644
--- a/pkgs/by-name/ne/newsflash/package.nix
+++ b/pkgs/by-name/ne/newsflash/package.nix
@@ -29,18 +29,18 @@
 
 stdenv.mkDerivation (finalAttrs: {
   pname = "newsflash";
-  version = "5.2.4";
+  version = "5.2.5";
 
   src = fetchFromGitLab {
     owner = "news-flash";
     repo = "news_flash_gtk";
     tag = "v.${finalAttrs.version}";
-    hash = "sha256-8Gs87eqcs/7SWNlv4pI4Y78bZb/gGhx0DtPzyZhe1Ew=";
+    hash = "sha256-oii3/VIV0zivHz/ZscVtJVvPm4SSlzpR+o6t0cS8JO8=";
   };
 
   cargoDeps = rustPlatform.fetchCargoVendor {
     inherit (finalAttrs) pname version src;
-    hash = "sha256-rklPsg9rYXkC29kSyST4JrrsPlL7FEx+wOuFypqWc7I=";
+    hash = "sha256-hR0rfOOLTVt8FuTG0RT80iO8Tt4UwMZwk/VYsBAoLBw=";
   };
 
   postPatch = ''
diff --git a/pkgs/by-name/no/nocturne/package.nix b/pkgs/by-name/no/nocturne/package.nix
index d7cc8945c3a5..ff6726c8f738 100644
--- a/pkgs/by-name/no/nocturne/package.nix
+++ b/pkgs/by-name/no/nocturne/package.nix
@@ -16,6 +16,8 @@
   python3,
   python3Packages,
   libadwaita,
+  libportal,
+  libportal-gtk4,
   gobject-introspection,
   libsecret,
   gst_all_1,
@@ -31,13 +33,13 @@
 
 stdenv.mkDerivation (finalAttrs: {
   pname = "nocturne";
-  version = "1.4.2";
+  version = "1.5.1";
 
   src = fetchFromGitHub {
     owner = "Jeffser";
     repo = "Nocturne";
     tag = finalAttrs.version;
-    hash = "sha256-q2jN1X/2Iayzqf+2d1roQ9dbZKGqWy3sXC78lKXLzPM=";
+    hash = "sha256-83RvrMFUmBUmeObz2u+ScNrT8hb9y02xxWiFqYGnAEU=";
   };
 
   __structuredAttrs = true;
@@ -63,6 +65,8 @@ stdenv.mkDerivation (finalAttrs: {
   buildInputs = [
     gtk4
     libadwaita
+    libportal
+    libportal-gtk4
     libsecret
     python3
     glib-networking
diff --git a/pkgs/by-name/nx/nxv/package.nix b/pkgs/by-name/nx/nxv/package.nix
index af4ed4d0ad6e..a9daa1fac9a1 100644
--- a/pkgs/by-name/nx/nxv/package.nix
+++ b/pkgs/by-name/nx/nxv/package.nix
@@ -8,16 +8,16 @@
 
 rustPlatform.buildRustPackage (finalAttrs: {
   pname = "nxv";
-  version = "0.6.0";
+  version = "0.7.0";
 
   src = fetchFromGitHub {
     owner = "utensils";
     repo = "nxv";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-Ym30QiImry+3Io933SFQw5q6Lyl5p8nuidQhrXHSv54=";
+    hash = "sha256-tjVhLHn2FH4QQ5ynLEiB2nJTmpu4viho2Sf+mc7YWX8=";
   };
 
-  cargoHash = "sha256-syAlYsXPxMUIyPNankujiVD3lXaAgGmr5v585ysxIWI=";
+  cargoHash = "sha256-Gx45+hiRByQc/OcHlJ7L4G+xh/IZHWipslQ3Xv5+fHE=";
 
   # Tests use mockito which needs to bind to localhost
   __darwinAllowLocalNetworking = true;
diff --git a/pkgs/by-name/ox/oxlint/package.nix b/pkgs/by-name/ox/oxlint/package.nix
index ed35ab136096..2647a436ec1b 100644
--- a/pkgs/by-name/ox/oxlint/package.nix
+++ b/pkgs/by-name/ox/oxlint/package.nix
@@ -23,25 +23,25 @@
 # runs without an external linter, which leaves `jsPlugins` configs inert.
 stdenv.mkDerivation (finalAttrs: {
   pname = "oxlint";
-  version = "1.75.0";
+  version = "1.76.0";
 
   src = fetchFromGitHub {
     owner = "oxc-project";
     repo = "oxc";
     tag = "oxlint_v${finalAttrs.version}";
-    hash = "sha256-pKnIgGlIajq/VCAafvOY6KCkNOd/D2ozU9FM3EARVH8=";
+    hash = "sha256-uXkAD4+B8ghUbti1ts1RO+Jc0wQlpovl6+JzZA1JaRk=";
   };
 
   cargoDeps = rustPlatform.fetchCargoVendor {
     inherit (finalAttrs) pname version src;
-    hash = "sha256-zY8Rgw75mRK7i0mFjsWF3sbqsR9T8Ce4JlptHldd5oM=";
+    hash = "sha256-eZAJdMDC09nE9n2Arh72ZZUQjmMFdA68rPCmH2tSx2w=";
   };
 
   pnpmDeps = fetchPnpmDeps {
     inherit (finalAttrs) pname version src;
     pnpm = pnpm_10;
     fetcherVersion = 3;
-    hash = "sha256-dBFsEaurRYGxet6kRF6M1LjSlBu3zU33Ul5vjcH2MWQ=";
+    hash = "sha256-WZ4eYwQNeDF55ax3mW5swKafCDeYG5rWPPzJk5f+H1k=";
   };
 
   dontUseCmakeConfigure = true;
diff --git a/pkgs/by-name/ph/phira-unwrapped/package.nix b/pkgs/by-name/ph/phira-unwrapped/package.nix
index 1daece210526..d8abd2388a71 100644
--- a/pkgs/by-name/ph/phira-unwrapped/package.nix
+++ b/pkgs/by-name/ph/phira-unwrapped/package.nix
@@ -14,7 +14,7 @@
 
 rustPlatform.buildRustPackage (finalAttrs: {
   pname = "phira-unwrapped";
-  version = "0.7.1";
+  version = "0.8.0";
 
   __structuredAttrs = true;
   strictDeps = true;
@@ -23,7 +23,7 @@ rustPlatform.buildRustPackage (finalAttrs: {
     owner = "TeamFlos";
     repo = "phira";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-bn1vRxL4O32Txna3RqafOzXISziDiL//S8NwiIK5c4M=";
+    hash = "sha256-/ziX3rkHs38BKNQU8Q9NJC51ArJbs/HBSKN7BIozCBY=";
   };
 
   nativeBuildInputs = [
@@ -54,7 +54,7 @@ rustPlatform.buildRustPackage (finalAttrs: {
     ./assets.patch
   ];
 
-  cargoHash = "sha256-a+bQ5d9n18jrsgnqygBlMKWlu7KPU5tbQQSXRXE5zWY=";
+  cargoHash = "sha256-R4JljAElhxT88Ar1cvBlv0qSquyrvia7Rbygr9NSxwY=";
 
   # The developer put assets necessary for this test in gitignore, so it cannot run.
   checkFlags = [ "--skip=test_parse_chart" ];
@@ -74,6 +74,8 @@ rustPlatform.buildRustPackage (finalAttrs: {
     install -Dm644 assets/icon.png $out/share/icons/hicolor/128x128/apps/phira.png
   '';
 
+  passthru.updateScript = ./update.sh;
+
   meta = {
     description = "Rhythm game with custom charts and multiplayer";
     homepage = "https://github.com/TeamFlos/phira";
diff --git a/pkgs/by-name/ph/phira-unwrapped/update.sh b/pkgs/by-name/ph/phira-unwrapped/update.sh
new file mode 100755
index 000000000000..a02de512be38
--- /dev/null
+++ b/pkgs/by-name/ph/phira-unwrapped/update.sh
@@ -0,0 +1,16 @@
+#!/usr/bin/env nix-shell
+#!nix-shell -p nix-update nix gnused -i bash
+
+set -euo pipefail
+
+old_version="$(nix-instantiate --eval --raw -A phira-unwrapped.version)"
+nix-update phira-unwrapped
+version="$(nix-instantiate --eval --raw -A phira-unwrapped.version)"
+if [[ "$old_version" == "$version" ]]; then
+  exit 0
+fi
+
+file="$(nix-instantiate --eval --raw -A phira.meta.position | cut -d : -f 1)"
+hash="$(nix-prefetch-url --unpack "https://github.com/TeamFlos/phira/releases/download/v$version/Phira-windows-x86_64-v$version.zip")"
+hash="$(nix-hash --to-sri --type sha256 "$hash")"
+sed -i "s|hash = \".*\";|hash = \"$hash\";|" "$file"
diff --git a/pkgs/by-name/ph/phira/package.nix b/pkgs/by-name/ph/phira/package.nix
index 590eac607de1..ccbe8e8244fd 100644
--- a/pkgs/by-name/ph/phira/package.nix
+++ b/pkgs/by-name/ph/phira/package.nix
@@ -12,7 +12,7 @@
   # A derivation or a path that contains a dir `assets`.
   overrideAssets ? fetchzip {
     url = "https://github.com/TeamFlos/phira/releases/download/v${phira-unwrapped.version}/Phira-windows-x86_64-v${phira-unwrapped.version}.zip";
-    hash = "sha256-p0+o7q42caHqVWnHtgknYaCIJemG/9fNKF7pqTnRGE4=";
+    hash = "sha256-1/FBg1i8O83yusEAFlXiYWyabv04n1qkXwLgWaw8sTc=";
     stripRoot = false;
     meta.license = lib.licenses.unfree;
   },
@@ -54,6 +54,9 @@ symlinkJoin {
 
   passthru.assets = overrideAssets;
 
-  meta = phira-unwrapped.meta;
+  meta = phira-unwrapped.meta // {
+    # trick meta.position
+    description = phira-unwrapped.meta.description;
+  };
 
 }
diff --git a/pkgs/by-name/pi/pinnacle/package.nix b/pkgs/by-name/pi/pinnacle/package.nix
index 3e42a9c08ed8..8c944589fd22 100644
--- a/pkgs/by-name/pi/pinnacle/package.nix
+++ b/pkgs/by-name/pi/pinnacle/package.nix
@@ -13,7 +13,7 @@
   mesa,
   xwayland,
   libinput,
-  libdisplay-info,
+  libdisplay-info_0_3,
   git,
   libgbm,
   rustc,
@@ -44,6 +44,10 @@ let
     license = lib.licenses.gpl3;
     mainProgram = "pinnacle";
     platforms = lib.platforms.linux;
+    badPlatforms = [
+      # tests fail https://hydra.nixos.org/build/337493260
+      "aarch64-linux"
+    ];
     maintainers = with lib.maintainers; [ cassandracomar ];
   };
 
@@ -96,7 +100,7 @@ rustPlatform.buildRustPackage (finalAttrs: {
     libinput
     mesa
     xwayland
-    libdisplay-info
+    libdisplay-info_0_3
     libgbm
     lua5_4
 
diff --git a/pkgs/by-name/pi/pinocchio/package.nix b/pkgs/by-name/pi/pinocchio/package.nix
index 66de2a0d5466..842951d1f6a5 100644
--- a/pkgs/by-name/pi/pinocchio/package.nix
+++ b/pkgs/by-name/pi/pinocchio/package.nix
@@ -5,10 +5,8 @@
   nix-update-script,
   stdenv,
 
-  # nativeBuildInputs
-  cmake,
-  doxygen,
-  pkg-config,
+  # buildInputs
+  jrl-cmakemodules,
 
   # propagatedBuildInputs
   boost,
@@ -16,7 +14,6 @@
   coal,
   console-bridge,
   eigen,
-  jrl-cmakemodules,
   urdfdom,
 
   # nativeCheckInputs
@@ -52,10 +49,10 @@ stdenv.mkDerivation (finalAttrs: {
 
   strictDeps = true;
 
-  nativeBuildInputs = [
-    cmake
-    doxygen
-    pkg-config
+  nativeBuildInputs = jrl-cmakemodules.docsNativeBuildInputs;
+
+  buildInputs = [
+    jrl-cmakemodules
   ];
 
   propagatedBuildInputs = [
@@ -63,7 +60,6 @@ stdenv.mkDerivation (finalAttrs: {
     coal
     console-bridge
     eigen
-    jrl-cmakemodules
     urdfdom
   ]
   ++ lib.optionals collisionSupport [ coal ]
@@ -88,7 +84,7 @@ stdenv.mkDerivation (finalAttrs: {
       "test-cpp-algorithm-utils-force"
     ];
 
-  cmakeFlags = [
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags ++ [
     (lib.cmakeBool "BUILD_PYTHON_INTERFACE" false)
     (lib.cmakeBool "BUILD_WITH_CASADI_SUPPORT" casadiSupport)
     (lib.cmakeBool "BUILD_WITH_COLLISION_SUPPORT" collisionSupport)
diff --git a/pkgs/by-name/pr/proxsuite/package.nix b/pkgs/by-name/pr/proxsuite/package.nix
index 4c0516b67752..666c8e5eb248 100644
--- a/pkgs/by-name/pr/proxsuite/package.nix
+++ b/pkgs/by-name/pr/proxsuite/package.nix
@@ -7,15 +7,12 @@
   pythonSupport ? false,
   python3Packages,
 
-  # nativeBuildInputs
-  cmake,
-  doxygen,
-  graphviz,
+  # buildInputs
+  jrl-cmakemodules,
 
   # propagatedBuildInputs
   cereal,
   eigen,
-  jrl-cmakemodules,
   simde,
 
   # nativeCheckInputs
@@ -46,7 +43,7 @@ stdenv.mkDerivation (finalAttrs: {
     "out"
   ];
 
-  cmakeFlags = [
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags ++ [
     (lib.cmakeBool "BUILD_DOCUMENTATION" true)
     (lib.cmakeBool "INSTALL_DOCUMENTATION" true)
     (lib.cmakeBool "BUILD_PYTHON_INTERFACE" pythonSupport)
@@ -54,20 +51,18 @@ stdenv.mkDerivation (finalAttrs: {
 
   strictDeps = true;
 
-  nativeBuildInputs = [
-    cmake
-    doxygen
-    graphviz
-  ]
-  ++ lib.optionals pythonSupport [
-    python3Packages.python
-    python3Packages.pythonImportsCheckHook
-  ];
+  nativeBuildInputs =
+    jrl-cmakemodules.docsNativeBuildInputs
+    ++ lib.optionals pythonSupport [
+      python3Packages.python
+      python3Packages.pythonImportsCheckHook
+    ];
+
+  buildInputs = [ jrl-cmakemodules ];
 
   propagatedBuildInputs = [
     cereal
     eigen
-    jrl-cmakemodules
     simde
   ]
   ++ lib.optionals pythonSupport [ python3Packages.nanobind ];
diff --git a/pkgs/by-name/pr/proxysql/btree-cstdint.patch b/pkgs/by-name/pr/proxysql/btree-cstdint.patch
new file mode 100644
index 000000000000..c5eae1c371d2
--- /dev/null
+++ b/pkgs/by-name/pr/proxysql/btree-cstdint.patch
@@ -0,0 +1,16 @@
+The vendored copy of Google's cpp-btree relies on <cstdint> being pulled in
+transitively.  libstdc++ 15 no longer does so, which makes uint8_t/uint16_t
+undeclared, and the resulting fallback to int trips the kNodeValues
+COMPILE_ASSERT with a "1 << 32" shift.
+
+diff --git a/include/btree.h b/include/btree.h
+--- a/include/btree.h
++++ b/include/btree.h
+@@ -104,6 +104,7 @@
+ #include <stddef.h>
+ #include <string.h>
+ #include <sys/types.h>
++#include <cstdint>
+ #include <algorithm>
+ #include <functional>
+ #include <iostream>
diff --git a/pkgs/by-name/pr/proxysql/makefiles.patch b/pkgs/by-name/pr/proxysql/makefiles.patch
index 17facc6744c1..bc47db822b4a 100644
--- a/pkgs/by-name/pr/proxysql/makefiles.patch
+++ b/pkgs/by-name/pr/proxysql/makefiles.patch
@@ -151,7 +151,7 @@ index 87d2a20e..505e069a 100644
  	cd mariadb-client-library && tar -zxf mariadb-connector-c-3.3.8-src.tar.gz
  	cd mariadb-client-library/mariadb_client && patch -p0 < ../plugin_auth_CMakeLists.txt.patch
 -	cd mariadb-client-library/mariadb_client && cmake . -Wno-dev -DCMAKE_BUILD_TYPE=RelWithDebInfo -DOPENSSL_ROOT_DIR=$(SSL_IDIR) -DOPENSSL_LIBRARIES=$(SSL_LDIR) -DICONV_LIBRARIES=$(brew --prefix libiconv)/lib -DICONV_INCLUDE=$(brew --prefix libiconv)/include .
-+	cd mariadb-client-library/mariadb_client && cmake . -Wno-dev -DCMAKE_POLICY_VERSION_MINIMUM=3.5 -DCMAKE_BUILD_TYPE=RelWithDebInfo -DOPENSSL_ROOT_DIR=$(SSL_IDIR) -DOPENSSL_LIBRARIES=$(SSL_LDIR) -DICONV_LIBRARIES=$(brew --prefix libiconv)/lib -DICONV_INCLUDE=$(brew --prefix libiconv)/include .
++	cd mariadb-client-library/mariadb_client && cmake . -Wno-dev -DCMAKE_POLICY_VERSION_MINIMUM=3.5 -DCMAKE_C_FLAGS=-std=gnu17 -DCMAKE_BUILD_TYPE=RelWithDebInfo -DOPENSSL_ROOT_DIR=$(SSL_IDIR) -DOPENSSL_LIBRARIES=$(SSL_LDIR) -DICONV_LIBRARIES=$(brew --prefix libiconv)/lib -DICONV_INCLUDE=$(brew --prefix libiconv)/include .
  ifeq ($(PROXYDEBUG),1)
  	cd mariadb-client-library/mariadb_client && patch -p0 < ../ma_context.h.patch
  else ifeq ($(USEVALGRIND),1)
diff --git a/pkgs/by-name/pr/proxysql/package.nix b/pkgs/by-name/pr/proxysql/package.nix
index 852c812b6d66..e31b2d20537d 100644
--- a/pkgs/by-name/pr/proxysql/package.nix
+++ b/pkgs/by-name/pr/proxysql/package.nix
@@ -49,6 +49,7 @@ stdenv.mkDerivation (finalAttrs: {
   patches = [
     ./makefiles.patch
     ./dont-phone-home.patch
+    ./btree-cstdint.patch
   ];
 
   nativeBuildInputs = [
diff --git a/pkgs/by-name/re/reindeer/package.nix b/pkgs/by-name/re/reindeer/package.nix
index a0de1bc728d9..7f6b49aca436 100644
--- a/pkgs/by-name/re/reindeer/package.nix
+++ b/pkgs/by-name/re/reindeer/package.nix
@@ -9,16 +9,16 @@
 
 rustPlatform.buildRustPackage (finalAttrs: {
   pname = "reindeer";
-  version = "2026.05.04.00";
+  version = "2026.07.27.00";
 
   src = fetchFromGitHub {
     owner = "facebookincubator";
     repo = "reindeer";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-m27zMZbDv/2bXhb16rFxUUokEn0bxyrhpxlOSZvVcfk=";
+    hash = "sha256-8/AtBZzjC5NSashMtEjCasZU53GqZTkoAhWytoIweGU=";
   };
 
-  cargoHash = "sha256-nJU9ClYxRkAfFkOq1V7k34pjdqJntDr3gJekUibq304=";
+  cargoHash = "sha256-MB/TQnOB96x86uAQJNt6IiTUmy74Dom4xtqWGga6GkA=";
 
   nativeBuildInputs = [ pkg-config ];
 
diff --git a/pkgs/by-name/re/remarshal_0_17/package.nix b/pkgs/by-name/re/remarshal_0_17/package.nix
deleted file mode 100644
index a4109bad5238..000000000000
--- a/pkgs/by-name/re/remarshal_0_17/package.nix
+++ /dev/null
@@ -1,76 +0,0 @@
-{
-  lib,
-  python3Packages,
-  fetchFromGitHub,
-  fetchPypi,
-  fetchpatch,
-}:
-
-let
-  packageOverrides = self: super: {
-    tomlkit = super.tomlkit.overridePythonAttrs (oldAttrs: rec {
-      version = "0.12.5";
-      src = fetchPypi {
-        pname = "tomlkit";
-        inherit version;
-        hash = "sha256-7vNPujmDTU1rc8m6fz5NHEF6Tlb4mn6W4JDdDSS4+zw=";
-      };
-      patches = [
-        (fetchpatch {
-          url = "https://github.com/python-poetry/tomlkit/commit/05d9be1c2b2a95a4eb3a53d999f1483dd7abae5a.patch";
-          hash = "sha256-9pLGxcGHs+XoKrqlh7Q0dyc07XrK7J6u2T7Kvfd0ICc=";
-          excludes = [ ".github/workflows/tests.yml" ];
-        })
-      ];
-    });
-  };
-  python = python3Packages.python.override (old: {
-    self = python3Packages.python;
-    packageOverrides = lib.composeExtensions (old.packageOverrides or (_: _: { })) packageOverrides;
-  });
-  pythonPackages = python.pkgs;
-in
-pythonPackages.buildPythonApplication (finalAttrs: {
-  pname = "remarshal";
-  version = "0.17.1"; # last version with YAML 1.1 support, do not update
-  pyproject = true;
-
-  __structuredAttrs = true;
-
-  src = fetchFromGitHub {
-    owner = "remarshal-project";
-    repo = "remarshal";
-    tag = "v${finalAttrs.version}";
-    hash = "sha256-2WxMh5P/8NvElymnMU3JzQU0P4DMXFF6j15OxLaS+VA=";
-  };
-
-  pythonRemoveDeps = [ "pytest" ];
-
-  build-system = [ pythonPackages.poetry-core ];
-
-  dependencies = with pythonPackages; [
-    cbor2
-    colorama
-    python-dateutil
-    pyyaml
-    rich-argparse
-    ruamel-yaml
-    tomlkit
-    u-msgpack-python
-  ];
-
-  pythonRelaxDeps = [ "cbor2" ];
-
-  nativeCheckInputs = [ pythonPackages.pytestCheckHook ];
-
-  # nixpkgs-update: no auto update
-
-  meta = {
-    changelog = "https://github.com/remarshal-project/remarshal/releases/tag/${finalAttrs.src.tag}";
-    description = "Convert between TOML, YAML and JSON";
-    license = lib.licenses.mit;
-    homepage = "https://github.com/remarshal-project/remarshal";
-    maintainers = with lib.maintainers; [ hexa ];
-    mainProgram = "remarshal";
-  };
-})
diff --git a/pkgs/by-name/re/remote-touchpad/package.nix b/pkgs/by-name/re/remote-touchpad/package.nix
index 1547b7284454..3e91a903bf33 100644
--- a/pkgs/by-name/re/remote-touchpad/package.nix
+++ b/pkgs/by-name/re/remote-touchpad/package.nix
@@ -10,13 +10,13 @@
 
 buildGoModule (finalAttrs: {
   pname = "remote-touchpad";
-  version = "1.5.3";
+  version = "1.5.4";
 
   src = fetchFromGitHub {
     owner = "unrud";
     repo = "remote-touchpad";
     rev = "v${finalAttrs.version}";
-    sha256 = "sha256-9K/AdkfpQbXPDIwai3h98G4lo4p8c/yTLxirhbo03U4=";
+    sha256 = "sha256-Erflr02yv6RT6vF9/WKMO7h0lEr2NMPinK7bj/SPMvI=";
   };
 
   buildInputs = [
@@ -27,7 +27,7 @@ buildGoModule (finalAttrs: {
   ];
   tags = [ "portal,x11" ];
 
-  vendorHash = "sha256-nkzvE59H7adyzveXYFI1NVwIh8chBRrVZZKfLY0fEaw=";
+  vendorHash = "sha256-9e8mfGpR7HtpB+Fca69pKQH52FZciOnpsD/bi1JW4q0=";
 
   meta = {
     description = "Control mouse and keyboard from the web browser of a smartphone";
diff --git a/pkgs/by-name/ru/rusty-psn/package.nix b/pkgs/by-name/ru/rusty-psn/package.nix
index 6bb7a8add975..3e2d35c0886e 100644
--- a/pkgs/by-name/ru/rusty-psn/package.nix
+++ b/pkgs/by-name/ru/rusty-psn/package.nix
@@ -24,16 +24,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "rusty-psn";
-  version = "0.5.10";
+  version = "0.6.0";
 
   src = fetchFromGitHub {
     owner = "RainbowCookie32";
     repo = "rusty-psn";
     tag = "v${version}";
-    hash = "sha256-3sy3PBiV7ioRnYwI2vF6lGVj3Q/Ls6GmENyGePCgQ3k=";
+    hash = "sha256-xdhNwKWJ2DjwKAPCeW26Ccl7oCmWdlNoAdZQKcDU8Ew=";
   };
 
-  cargoHash = "sha256-orsCExYx9ZGtda13mmFk7665WFwZ7E7rr5wEcDxc+vY=";
+  cargoHash = "sha256-Kf/+5u1zPLNCFhT+IDvFWnrG4TfcjzJjaTw8w0vyfi0=";
 
   # Tests require network access
   doCheck = false;
diff --git a/pkgs/by-name/sa/satty/package.nix b/pkgs/by-name/sa/satty/package.nix
index 10a039fe384d..3d9b5bf7e359 100644
--- a/pkgs/by-name/sa/satty/package.nix
+++ b/pkgs/by-name/sa/satty/package.nix
@@ -17,16 +17,16 @@
 rustPlatform.buildRustPackage (finalAttrs: {
 
   pname = "satty";
-  version = "0.21.1";
+  version = "0.22.0";
 
   src = fetchFromGitHub {
     owner = "Satty-org";
     repo = "Satty";
     rev = "v${finalAttrs.version}";
-    hash = "sha256-pD91+MbieZ5/YoUR0lcKnJ9bA1fn7I97NbnIwm/kL7E=";
+    hash = "sha256-76J4ZlBKeow2sWs1SeSkE8R2fKRTFD+B+7Vx3nbbQxY=";
   };
 
-  cargoHash = "sha256-Oavfb2Jp9WO0eaT5TqRwSxU3+rm9lBxwuWTWnc2CnZ0=";
+  cargoHash = "sha256-R8I8eZ8vy6w1DGNrkP9Os2tAOIetqXCyn0cxWpk9F+w=";
 
   # Generate shell completions and man file
   buildFeatures = [ "ci-release" ];
diff --git a/pkgs/by-name/si/sing-box/package.nix b/pkgs/by-name/si/sing-box/package.nix
index 7a33b4b6e8f5..638b85e58b4d 100644
--- a/pkgs/by-name/si/sing-box/package.nix
+++ b/pkgs/by-name/si/sing-box/package.nix
@@ -18,7 +18,7 @@ assert lib.assertMsg (
 ) "Dynamic linking to cronet-go is only available on Linux.";
 buildGoModule (finalAttrs: {
   pname = "sing-box";
-  version = "1.13.15";
+  version = "1.13.16";
 
   __structuredAttrs = true;
 
@@ -27,10 +27,10 @@ buildGoModule (finalAttrs: {
     owner = "SagerNet";
     repo = "sing-box";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-YkbF5+smzP+AQ161xvTBO01ZIB3PonHVM0l5DVRSnFs=";
+    hash = "sha256-GAIU0SRvxU92E40zCkMsiSPuIEIUZM5vORN2u2XIhqs=";
   };
 
-  vendorHash = "sha256-HIMKtolVXbmyV1vmXXAt3O/2NTp4HwzhUWChs8I4+cs=";
+  vendorHash = "sha256-ZUEpYfgb/iflImVCdLIgUzfp4QY9ho1gYkIAJV1tXrg=";
 
   tags = [
     "with_gvisor"
diff --git a/pkgs/by-name/si/siyuan/package.nix b/pkgs/by-name/si/siyuan/package.nix
index 88adb201f72a..cdf2d7e714ec 100644
--- a/pkgs/by-name/si/siyuan/package.nix
+++ b/pkgs/by-name/si/siyuan/package.nix
@@ -34,20 +34,20 @@ let
 in
 stdenv.mkDerivation (finalAttrs: {
   pname = "siyuan";
-  version = "3.7.1";
+  version = "3.7.3";
 
   src = fetchFromGitHub {
     owner = "siyuan-note";
     repo = "siyuan";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-K31h2noDpTn7vCXj16K2dxRPww5z+HC/nA4Gn5MAVms=";
+    hash = "sha256-7Uoo8vYaci8ROk5pqs14dNrU3q7UsadDXyw1mW8Mx5I=";
   };
 
   kernel = buildGoModule {
     name = "${finalAttrs.pname}-${finalAttrs.version}-kernel";
     inherit (finalAttrs) src;
     sourceRoot = "${finalAttrs.src.name}/kernel";
-    vendorHash = "sha256-fZLVqrWTWUHo6BhixB6+krXaM7WCiZpusHA8T2SicgQ=";
+    vendorHash = "sha256-weg5MRidW8JId13Ug1VaVgaIcJqydGBR/EquFOS3QO4=";
 
     patches = [
       (replaceVars ./set-pandoc-path.patch {
@@ -70,6 +70,9 @@ stdenv.mkDerivation (finalAttrs: {
       "-X 'github.com/siyuan-note/siyuan/kernel/util.Mode=prod'"
     ];
     tags = [ "fts5" ];
+
+    # filepath.ToSlash does not convert Windows path separators on Unix.
+    checkFlags = [ "-skip=^TestSyObjectBase/windows_backslash$" ];
   };
 
   nativeBuildInputs = [
@@ -95,7 +98,7 @@ stdenv.mkDerivation (finalAttrs: {
       ;
     inherit pnpm;
     fetcherVersion = 4;
-    hash = "sha256-1QIGx0Zm6v4FIR1EYgXQzmBMZBa9Bi24vouT1K6v9EQ=";
+    hash = "sha256-i7llORlVU1CCmyVCvJr7xCQffTmbmIA9rT68Raqg5y8=";
   };
 
   sourceRoot = "${finalAttrs.src.name}/app";
diff --git a/pkgs/by-name/sv/svelte-check/package.nix b/pkgs/by-name/sv/svelte-check/package.nix
index c2db29dcf953..e7f8db77482c 100644
--- a/pkgs/by-name/sv/svelte-check/package.nix
+++ b/pkgs/by-name/sv/svelte-check/package.nix
@@ -14,13 +14,13 @@ let
 in
 stdenv.mkDerivation (finalAttrs: {
   pname = "svelte-check";
-  version = "4.3.1";
+  version = "4.7.4";
 
   src = fetchFromGitHub {
     owner = "sveltejs";
     repo = "language-tools";
-    tag = "svelte-check-${finalAttrs.version}";
-    hash = "sha256-+KDl7tTyXo6QMQpMGA4hSChDaPrfqfVKJXGunTlo9Rg=";
+    tag = "svelte-check@${finalAttrs.version}";
+    hash = "sha256-fjJp+4XAwUPZV8kVvgHnb1LVJbamzrboS3Taax1Vwvs=";
   };
 
   pnpmWorkspaces = [ "svelte-check..." ];
@@ -34,7 +34,7 @@ stdenv.mkDerivation (finalAttrs: {
       ;
     inherit pnpm;
     fetcherVersion = 3;
-    hash = "sha256-43AIkVzpcq/Y+QO2k7pkr6CN340idXJEpie0gVdxra8=";
+    hash = "sha256-lzphyVC1fpT5EFIuVz7ZMAiSLeyXhjSuOpAqSklh6QU=";
   };
 
   nativeBuildInputs = [
@@ -72,7 +72,7 @@ stdenv.mkDerivation (finalAttrs: {
     extraArgs = [
       "--use-github-releases"
       "--version-regex"
-      "svelte-check-(.*)"
+      "svelte-check@(.*)"
     ];
   };
 
diff --git a/pkgs/by-name/ta/tabbyapi/package.nix b/pkgs/by-name/ta/tabbyapi/package.nix
index 2ecf9cb6b700..e6eed91c61ff 100644
--- a/pkgs/by-name/ta/tabbyapi/package.nix
+++ b/pkgs/by-name/ta/tabbyapi/package.nix
@@ -7,14 +7,14 @@
 }:
 python3Packages.buildPythonApplication {
   pname = "tabbyapi";
-  version = "0-unstable-2026-07-18";
+  version = "0-unstable-2026-07-31";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "theroyallab";
     repo = "tabbyAPI";
-    rev = "0158fb48d76546a6475d1d63f6cd5b90932d1d11";
-    hash = "sha256-Bkpx3MyZg7Np5zXAsq8mgxdAFsHUZhy2NZ93XSLbJgk=";
+    rev = "29680f496b57e3ed1a496c580677d2d67ac729b8";
+    hash = "sha256-eB8Q4iVlNCrgHHWutuhxzD+bQfC5Yx3z2rSCCSFsrL4=";
   };
 
   build-system = with python3Packages; [
diff --git a/pkgs/by-name/tc/tclint/package.nix b/pkgs/by-name/tc/tclint/package.nix
index b602814a48fe..e8a00d71aa9a 100644
--- a/pkgs/by-name/tc/tclint/package.nix
+++ b/pkgs/by-name/tc/tclint/package.nix
@@ -16,14 +16,15 @@ let
 in
 pythonPackages.buildPythonApplication (finalAttrs: {
   pname = "tclint";
-  version = "0.8.0";
+  version = "0.9.0";
   pyproject = true;
+  __structuredAttrs = true;
 
   src = fetchFromGitHub {
     owner = "nmoroze";
     repo = "tclint";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-HEmNdDq8xeGHCLJRvGGa13KaX7iLyyNkv3nYcJsZjrw=";
+    hash = "sha256-+ev/zqZwgW80XmVs8T+Ji37aJMOpr/1QyLAeHJES13Y=";
   };
 
   build-system = with pythonPackages; [
@@ -53,7 +54,6 @@ pythonPackages.buildPythonApplication (finalAttrs: {
     pythonPackages.pytestCheckHook
     versionCheckHook
   ];
-  versionCheckProgramArg = "--version";
 
   disabledTestPaths = [
     # Fails to find lsprotocol in the sandbox, even when added to nativeCheckInputs
diff --git a/pkgs/by-name/ts/tsid/package.nix b/pkgs/by-name/ts/tsid/package.nix
index ec43fc9c74f2..a9167ce1a6d5 100644
--- a/pkgs/by-name/ts/tsid/package.nix
+++ b/pkgs/by-name/ts/tsid/package.nix
@@ -1,11 +1,9 @@
 {
-  cmake,
-  doxygen,
   eiquadprog,
   fetchFromGitHub,
+  jrl-cmakemodules,
   lib,
   osqp-eigen,
-  pkg-config,
   pinocchio,
   proxsuite,
   stdenv,
@@ -22,7 +20,7 @@ stdenv.mkDerivation (finalAttrs: {
     hash = "sha256-f/SecQfEmrlelVR5584KIHFwwrp5Cy2aBMKI/rxuPmc=";
   };
 
-  cmakeFlags = [
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags ++ [
     (lib.cmakeBool "BUILD_PYTHON_INTERFACE" false)
     (lib.cmakeBool "BUILD_WITH_OSQP" true)
     (lib.cmakeBool "BUILD_WITH_PROXQP" true)
@@ -34,10 +32,10 @@ stdenv.mkDerivation (finalAttrs: {
     "doc"
   ];
 
-  nativeBuildInputs = [
-    doxygen
-    cmake
-    pkg-config
+  nativeBuildInputs = jrl-cmakemodules.docsNativeBuildInputs;
+
+  buildInputs = [
+    jrl-cmakemodules
   ];
 
   propagatedBuildInputs = [
diff --git a/pkgs/by-name/vi/vips/package.nix b/pkgs/by-name/vi/vips/package.nix
index b8416afee457..b8ebc992f44a 100644
--- a/pkgs/by-name/vi/vips/package.nix
+++ b/pkgs/by-name/vi/vips/package.nix
@@ -58,7 +58,7 @@
 
 stdenv.mkDerivation (finalAttrs: {
   pname = "vips";
-  version = "8.18.3";
+  version = "8.18.4";
 
   outputs = [
     "bin"
@@ -72,7 +72,7 @@ stdenv.mkDerivation (finalAttrs: {
     owner = "libvips";
     repo = "libvips";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-P8qjbCcpWNgKthZrXd+GykfPoU2x6avMNoYX1I+YE+k=";
+    hash = "sha256-qSXNXqNXZZFLFOIn24FLB8LNS7JiBdxFI2mRu0oICHM=";
     # Remove unicode file names which leads to different checksums on HFS+
     # vs. other filesystems because of unicode normalisation.
     postFetch = ''
diff --git a/pkgs/by-name/wo/wofi-power-menu/package.nix b/pkgs/by-name/wo/wofi-power-menu/package.nix
index 774b715dc419..a85db571265d 100644
--- a/pkgs/by-name/wo/wofi-power-menu/package.nix
+++ b/pkgs/by-name/wo/wofi-power-menu/package.nix
@@ -10,16 +10,16 @@
 
 rustPlatform.buildRustPackage (finalAttrs: {
   pname = "wofi-power-menu";
-  version = "0.3.4";
+  version = "0.3.5";
 
   src = fetchFromGitHub {
     owner = "szaffarano";
     repo = "wofi-power-menu";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-5dhwDfWL0pP28rgbS5eoOARrXDZVTF6EDNimcfcjH3Y=";
+    hash = "sha256-5aWlTtFlflj1Ts0NU/afP9dp3+G6Vqgp220YD3q9sps=";
   };
 
-  cargoHash = "sha256-Avful4JlhYrdHpzWfseCmmx5jxuOJxEA2Yl6dfkJpXs=";
+  cargoHash = "sha256-wTDam0bBFss1DqdJNQ+lFwJUmVCQaIYtgC2wIMFO6sk=";
 
   nativeBuildInputs = [ makeBinaryWrapper ];
 
diff --git a/pkgs/by-name/zu/zuban/package.nix b/pkgs/by-name/zu/zuban/package.nix
index 6c8266fdd4b2..63b562acb99f 100644
--- a/pkgs/by-name/zu/zuban/package.nix
+++ b/pkgs/by-name/zu/zuban/package.nix
@@ -9,13 +9,13 @@
 rustPlatform.buildRustPackage (finalAttrs: {
   pname = "zuban";
 
-  version = "0.9.0";
+  version = "0.9.1";
 
   src = fetchFromGitHub {
     owner = "zubanls";
     repo = "zuban";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-g06iHdbKb/uZkGkbX7fHB0MMDbuYYnGodQAEPvA18KA=";
+    hash = "sha256-06NECIV6f1kFspWMMOQ4C+t83ESwv8CVuoShH4G0VyU=";
     fetchSubmodules = true;
   };
 
@@ -26,7 +26,7 @@ rustPlatform.buildRustPackage (finalAttrs: {
 
   buildAndTestSubdir = "crates/zuban";
 
-  cargoHash = "sha256-bfiWuig9ySkbJ/2CL4jGlNYn/YvVClB3Eg0cq8dKi3E=";
+  cargoHash = "sha256-m5d5Q/fv3yAlUT8ILaA54uQe6FVrKFk5YGXX97ln1p0=";
 
   nativeInstallCheckInputs = [
     versionCheckHook
diff --git a/pkgs/development/ocaml-modules/aeneas/default.nix b/pkgs/development/ocaml-modules/aeneas/default.nix
index 13e23a8839e4..7fe508b5a6d1 100644
--- a/pkgs/development/ocaml-modules/aeneas/default.nix
+++ b/pkgs/development/ocaml-modules/aeneas/default.nix
@@ -18,7 +18,7 @@
 buildDunePackage (finalAttrs: {
   pname = "aeneas";
   # Keep aeneas and charon in sync
-  version = "${charon.version}-bc2eb6f";
+  version = "${charon.version}-daa85d7";
   __structuredAttrs = true;
 
   minimalOCamlVersion = "5.1";
@@ -27,7 +27,7 @@ buildDunePackage (finalAttrs: {
     owner = "AeneasVerif";
     repo = "aeneas";
     tag = "nightly-${finalAttrs.version}";
-    hash = "sha256-V5+3pPpDhcrRGA9kmYmod3/pScwfYZEj6MJKsuhbROk=";
+    hash = "sha256-NuJi6a99GzS/SLvM4wGUTBN4Td2XqD4Ei61eCR8zHWs=";
   };
 
   sourceRoot = "${finalAttrs.src.name}/src";
diff --git a/pkgs/development/ocaml-modules/charon/default.nix b/pkgs/development/ocaml-modules/charon/default.nix
index b3dbaf0c2ade..7cda2d16bbd4 100644
--- a/pkgs/development/ocaml-modules/charon/default.nix
+++ b/pkgs/development/ocaml-modules/charon/default.nix
@@ -16,14 +16,14 @@
 
 buildDunePackage (finalAttrs: {
   pname = "charon";
-  version = "2026.07.16";
+  version = "2026.08.03";
   __structuredAttrs = true;
 
   src = fetchFromGitHub {
     owner = "AeneasVerif";
     repo = "charon";
     tag = "nightly-${finalAttrs.version}";
-    hash = "sha256-n0dY7T8HMbNPTibD53Vpd4ZS/0KNqEfazPJJxy4Uk3g=";
+    hash = "sha256-ecRxops1EdgTulggQDA2yCFxjMp1LNnF5EEWTIsyIZw=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/apache-beam/default.nix b/pkgs/development/python-modules/apache-beam/default.nix
index a3c834e0e751..7675694f7d25 100644
--- a/pkgs/development/python-modules/apache-beam/default.nix
+++ b/pkgs/development/python-modules/apache-beam/default.nix
@@ -79,13 +79,23 @@ buildPythonPackage (finalAttrs: {
 
   sourceRoot = "${finalAttrs.src.name}/sdks/python";
 
+  patches = [
+    # Beam's dataframe module references DataFrame.first/last/bool/applymap, all removed in
+    # pandas 3. Their `with_docs_from` decorators do getattr at import, crashing frames.py (which
+    # then never registers the deferred types). Guard them behind hasattr like the neighboring
+    # ffill/bfill aliases. Upstream caps pandas < 2.4, so this is nixpkgs-local.
+    ./pandas-3-compat.patch
+  ];
+
   postPatch = ''
     substituteInPlace pyproject.toml \
       --replace-fail "distlib==0.4.2" "distlib" \
       --replace-fail "cython>=3.2.5,<4" "cython" \
+      --replace-fail "numpy>=1.14.3,<2.5.0" "numpy" \
       --replace-fail "==" ">="
 
     substituteInPlace setup.py \
+      --replace-fail "numpy>=1.14.3,<2.5.0" "numpy" \
       --replace-fail "  copy_tests_from_docs()" ""
   '';
 
@@ -94,6 +104,7 @@ buildPythonPackage (finalAttrs: {
     "envoy-data-plane"
     "httplib2"
     "jsonpickle"
+    "numpy"
     "objsize"
     "protobuf"
     "pyarrow"
@@ -238,6 +249,12 @@ buildPythonPackage (finalAttrs: {
     # grpc_status:14, grpc_message:"Cancelling all calls"}"
     # Upstream issue https://github.com/apache/beam/issues/33851
     "apache_beam/runners/portability/portable_runner_test.py"
+
+    # Pandas 3 behavioral changes in Beam's dataframe module (upstream caps pandas < 2.4):
+    # the doctests compare against pandas-version-specific output and the taxiride example
+    # relies on DataFrame APIs removed in pandas 3.
+    "apache_beam/dataframe/doctests_test.py"
+    "apache_beam/examples/dataframe/taxiride_test.py"
   ]
   ++ lib.optionals (pythonAtLeast "3.13") [
     # > instruction = ofs_table[pc]
@@ -307,6 +324,28 @@ buildPythonPackage (finalAttrs: {
 
     # AssertionError: False is not true
     "test_samples_all_with_both_experiments"
+
+    # ValueError: buffer source array is read-only (Cython coder over a read-only numpy buffer)
+    "test_coders_microbenchmark"
+
+    # Pandas 3 behavioral changes in Beam's dataframe module (upstream caps pandas < 2.4).
+    # groupby() no longer accepts the removed `axis` argument:
+    "test_groupby_apply"
+    "test_groupby_sum_mean"
+    "test_scalar"
+    # (only surface on Python 3.13, but same groupby() `axis` root cause)
+    "test_dataframes_with_grouped_index"
+    "test_dataframes_with_multi_index"
+    "test_dataframes_with_multi_index_get_result"
+    # read_csv attribute/dtype differences:
+    "test_csv_splitter_00_defaults"
+    "test_csv_splitter_01_header"
+    "test_csv_splitter_05_names_and_header"
+    "test_csv_splitter_06_skip_blank_lines"
+    "test_csv_splitter_07_skip_blank_lines"
+    "test_csv_splitter_08_comment"
+    # nan instead of None for missing values:
+    "test_convert_with_none"
   ]
   ++ lib.optionals stdenv.hostPlatform.isDarwin [
     #  PermissionError: [Errno 13] Permission denied: '/tmp/...'
diff --git a/pkgs/development/python-modules/apache-beam/pandas-3-compat.patch b/pkgs/development/python-modules/apache-beam/pandas-3-compat.patch
new file mode 100644
index 000000000000..b15907528659
--- /dev/null
+++ b/pkgs/development/python-modules/apache-beam/pandas-3-compat.patch
@@ -0,0 +1,169 @@
+--- a/apache_beam/dataframe/frames.py
++++ b/apache_beam/dataframe/frames.py
+@@ -335,35 +335,37 @@
+   if hasattr(pd.DataFrame, 'pad'):
+     pad = _fillna_alias('pad')
+ 
+-  @frame_base.with_docs_from(pd.DataFrame)
+-  def first(self, offset):
+-    per_partition = expressions.ComputedExpression(
+-        'first-per-partition', lambda df: df.sort_index().first(offset=offset),
+-        [self._expr],
+-        preserves_partition_by=partitionings.Arbitrary(),
+-        requires_partition_by=partitionings.Arbitrary())
+-    with expressions.allow_non_parallel_operations(True):
+-      return frame_base.DeferredFrame.wrap(
+-          expressions.ComputedExpression(
+-              'first', lambda df: df.sort_index().first(offset=offset),
+-              [per_partition],
+-              preserves_partition_by=partitionings.Arbitrary(),
+-              requires_partition_by=partitionings.Singleton()))
++  if hasattr(pd.DataFrame, 'first'):
++    @frame_base.with_docs_from(pd.DataFrame)
++    def first(self, offset):
++      per_partition = expressions.ComputedExpression(
++          'first-per-partition', lambda df: df.sort_index().first(offset=offset),
++          [self._expr],
++          preserves_partition_by=partitionings.Arbitrary(),
++          requires_partition_by=partitionings.Arbitrary())
++      with expressions.allow_non_parallel_operations(True):
++        return frame_base.DeferredFrame.wrap(
++            expressions.ComputedExpression(
++                'first', lambda df: df.sort_index().first(offset=offset),
++                [per_partition],
++                preserves_partition_by=partitionings.Arbitrary(),
++                requires_partition_by=partitionings.Singleton()))
+ 
+-  @frame_base.with_docs_from(pd.DataFrame)
+-  def last(self, offset):
+-    per_partition = expressions.ComputedExpression(
+-        'last-per-partition', lambda df: df.sort_index().last(offset=offset),
+-        [self._expr],
+-        preserves_partition_by=partitionings.Arbitrary(),
+-        requires_partition_by=partitionings.Arbitrary())
+-    with expressions.allow_non_parallel_operations(True):
+-      return frame_base.DeferredFrame.wrap(
+-          expressions.ComputedExpression(
+-              'last', lambda df: df.sort_index().last(offset=offset),
+-              [per_partition],
+-              preserves_partition_by=partitionings.Arbitrary(),
+-              requires_partition_by=partitionings.Singleton()))
++  if hasattr(pd.DataFrame, 'last'):
++    @frame_base.with_docs_from(pd.DataFrame)
++    def last(self, offset):
++      per_partition = expressions.ComputedExpression(
++          'last-per-partition', lambda df: df.sort_index().last(offset=offset),
++          [self._expr],
++          preserves_partition_by=partitionings.Arbitrary(),
++          requires_partition_by=partitionings.Arbitrary())
++      with expressions.allow_non_parallel_operations(True):
++        return frame_base.DeferredFrame.wrap(
++            expressions.ComputedExpression(
++                'last', lambda df: df.sort_index().last(offset=offset),
++                [per_partition],
++                preserves_partition_by=partitionings.Arbitrary(),
++                requires_partition_by=partitionings.Singleton()))
+ 
+   @frame_base.with_docs_from(pd.DataFrame)
+   @frame_base.args_to_kwargs(pd.DataFrame)
+@@ -798,27 +800,28 @@
+               requires_partition_by=partitionings.Singleton(),
+               preserves_partition_by=partitionings.Singleton()))
+ 
+-  @frame_base.with_docs_from(pd.DataFrame)
+-  def bool(self):
+-    # TODO: Documentation about DeferredScalar
+-    # Will throw if any partition has >1 element
+-    bools = expressions.ComputedExpression(
+-        'get_bools',
+-        # Wrap scalar results in a Series for easier concatenation later
+-        lambda df: pd.Series([], dtype=bool)
+-        if df.empty else pd.Series([df.bool()]),
+-        [self._expr],
+-        requires_partition_by=partitionings.Arbitrary(),
+-        preserves_partition_by=partitionings.Singleton())
++  if hasattr(pd.DataFrame, 'bool'):
++    @frame_base.with_docs_from(pd.DataFrame)
++    def bool(self):
++      # TODO: Documentation about DeferredScalar
++      # Will throw if any partition has >1 element
++      bools = expressions.ComputedExpression(
++          'get_bools',
++          # Wrap scalar results in a Series for easier concatenation later
++          lambda df: pd.Series([], dtype=bool)
++          if df.empty else pd.Series([df.bool()]),
++          [self._expr],
++          requires_partition_by=partitionings.Arbitrary(),
++          preserves_partition_by=partitionings.Singleton())
+ 
+-    with expressions.allow_non_parallel_operations(True):
+-      # Will throw if overall dataset has != 1 element
+-      return frame_base.DeferredFrame.wrap(
+-          expressions.ComputedExpression(
+-              'combine_all_bools', lambda bools: bools.bool(), [bools],
+-              proxy=bool(),
+-              requires_partition_by=partitionings.Singleton(),
+-              preserves_partition_by=partitionings.Singleton()))
++      with expressions.allow_non_parallel_operations(True):
++        # Will throw if overall dataset has != 1 element
++        return frame_base.DeferredFrame.wrap(
++            expressions.ComputedExpression(
++                'combine_all_bools', lambda bools: bools.bool(), [bools],
++                proxy=bool(),
++                requires_partition_by=partitionings.Singleton(),
++                preserves_partition_by=partitionings.Singleton()))
+ 
+   @frame_base.with_docs_from(pd.DataFrame)
+   def equals(self, other):
+@@ -2932,7 +2935,8 @@
+ 
+   agg = aggregate
+ 
+-  applymap = frame_base._elementwise_method('applymap', base=pd.DataFrame)
++  if hasattr(pd.DataFrame, 'applymap'):
++    applymap = frame_base._elementwise_method('applymap', base=pd.DataFrame)
+   if PD_VERSION >= (2, 1):
+     map = frame_base._elementwise_method('map', base=pd.DataFrame)
+   add_prefix = frame_base._elementwise_method('add_prefix', base=pd.DataFrame)
+@@ -4414,18 +4418,19 @@
+ 
+     return self.apply(apply_fn).droplevel(self._grouping_columns)
+ 
+-  @property  # type: ignore
+-  @frame_base.with_docs_from(DataFrameGroupBy)
+-  def dtypes(self):
+-    return frame_base.DeferredFrame.wrap(
+-        expressions.ComputedExpression(
+-            'dtypes',
+-            lambda gb: gb.dtypes,
+-            [self._expr],
+-            requires_partition_by=partitionings.Arbitrary(),
+-            preserves_partition_by=partitionings.Arbitrary()
+-        )
+-    )
++  if hasattr(DataFrameGroupBy, 'dtypes'):
++    @property  # type: ignore
++    @frame_base.with_docs_from(DataFrameGroupBy)
++    def dtypes(self):
++      return frame_base.DeferredFrame.wrap(
++          expressions.ComputedExpression(
++              'dtypes',
++              lambda gb: gb.dtypes,
++              [self._expr],
++              requires_partition_by=partitionings.Arbitrary(),
++              preserves_partition_by=partitionings.Arbitrary()
++          )
++      )
+ 
+   if hasattr(DataFrameGroupBy, 'value_counts'):
+     @frame_base.with_docs_from(DataFrameGroupBy)
+@@ -4745,7 +4750,8 @@
+   describe = frame_base.not_implemented_method('describe',
+                                                base_type=DataFrameGroupBy)
+   diff = frame_base._elementwise_method('diff', base=DataFrameGroupBy)
+-  fillna = frame_base._elementwise_method('fillna', base=DataFrameGroupBy)
++  if hasattr(DataFrameGroupBy, 'fillna'):
++    fillna = frame_base._elementwise_method('fillna', base=DataFrameGroupBy)
+   filter = frame_base._elementwise_method('filter', base=DataFrameGroupBy)
+   first = frame_base._elementwise_method('first', base=DataFrameGroupBy)
+   get_group = frame_base._elementwise_method('get_group', base=DataFrameGroupBy)
diff --git a/pkgs/development/python-modules/autofaiss/default.nix b/pkgs/development/python-modules/autofaiss/default.nix
index ffe764851671..654fdb48380b 100644
--- a/pkgs/development/python-modules/autofaiss/default.nix
+++ b/pkgs/development/python-modules/autofaiss/default.nix
@@ -14,18 +14,20 @@
   numpy,
   pyarrow,
 
+  # tests
   pytestCheckHook,
 }:
 
-buildPythonPackage rec {
+buildPythonPackage (finalAttrs: {
   pname = "autofaiss";
   version = "2.18.0";
   pyproject = true;
+  __structuredAttrs = true;
 
   src = fetchFromGitHub {
     owner = "criteo";
     repo = "autofaiss";
-    tag = version;
+    tag = finalAttrs.version;
     hash = "sha256-XuubpTxmyKdV9nWqLTljp5cNyIwLt2BKJYcBzwPNzD8=";
   };
 
@@ -40,12 +42,10 @@ buildPythonPackage rec {
   ];
 
   pythonRelaxDeps = [
+    "pandas"
     # As of v2.15.4, autofaiss asks for fire<0.5 but we have fire v0.5.0 in
     # nixpkgs at the time of writing (2022-12-25).
     "fire"
-    # As of v2.15.3, autofaiss asks for pyarrow<8 but we have pyarrow v9.0.0 in
-    # nixpkgs at the time of writing (2022-12-15).
-    "pyarrow"
 
     # No official numpy2 support yet
     "numpy"
@@ -60,7 +60,9 @@ buildPythonPackage rec {
     pyarrow
   ];
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  nativeCheckInputs = [
+    pytestCheckHook
+  ];
 
   disabledTests = [
     # Attempts to spin up a Spark cluster and talk to it which doesn't work in
@@ -81,8 +83,8 @@ buildPythonPackage rec {
     description = "Automatically create Faiss knn indices with the most optimal similarity search parameters";
     mainProgram = "autofaiss";
     homepage = "https://github.com/criteo/autofaiss";
-    changelog = "https://github.com/criteo/autofaiss/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/criteo/autofaiss/blob/${finalAttrs.src.tag}/CHANGELOG.md";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ samuela ];
   };
-}
+})
diff --git a/pkgs/development/python-modules/botorch/default.nix b/pkgs/development/python-modules/botorch/default.nix
index 1cc078b4224a..0bcaf74767cd 100644
--- a/pkgs/development/python-modules/botorch/default.nix
+++ b/pkgs/development/python-modules/botorch/default.nix
@@ -3,6 +3,7 @@
   stdenv,
   buildPythonPackage,
   fetchFromGitHub,
+  fetchpatch,
 
   # build-system
   setuptools,
@@ -42,6 +43,16 @@ buildPythonPackage (finalAttrs: {
     hash = "sha256-tUTtImqPlbS8g1oLoTTCCWQbeLwLop13qPjFrQeMtb8=";
   };
 
+  patches = [
+    # Allow scipy 1.18 in batched L-BFGS-B fast path
+    # https://github.com/meta-pytorch/botorch/pull/3328
+    (fetchpatch {
+      name = "scipy-1.18.patch";
+      url = "https://github.com/meta-pytorch/botorch/commit/611f14acc8c1b2f30ce2ae058568d90f96bbb2ec.patch";
+      hash = "sha256-PiXq9GmPaWQXh+emY7aNI53Y+ufl8K5uOFa8GD0clP8=";
+    })
+  ];
+
   build-system = [
     setuptools
     setuptools-scm
diff --git a/pkgs/development/python-modules/cel-python/default.nix b/pkgs/development/python-modules/cel-python/default.nix
new file mode 100644
index 000000000000..46ce25d69767
--- /dev/null
+++ b/pkgs/development/python-modules/cel-python/default.nix
@@ -0,0 +1,66 @@
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+
+  # build-system
+  hatchling,
+
+  # dependencies
+  google-re2,
+  jmespath,
+  lark,
+  pendulum,
+  pyyaml,
+
+  # tests
+  pytestCheckHook,
+}:
+
+buildPythonPackage (finalAttrs: {
+  pname = "cel-python";
+  version = "0.5.0";
+  pyproject = true;
+  __structuredAttrs = true;
+
+  src = fetchFromGitHub {
+    owner = "cloud-custodian";
+    repo = "cel-python";
+    tag = "v${lib.versions.majorMinor finalAttrs.version}";
+    hash = "sha256-DPHgHRvzQnBzjl2y9yNWt330xF535dO0iBObuqlr+PI=";
+  };
+
+  build-system = [ hatchling ];
+
+  dependencies = [
+    google-re2
+    jmespath
+    lark
+    pendulum
+    pyyaml
+  ];
+
+  pythonImportsCheck = [ "celpy" ];
+
+  nativeCheckInputs = [
+    pytestCheckHook
+  ];
+
+  enabledTestPaths = [
+    "tests"
+  ];
+
+  disabledTestPaths = [
+    # Require cloud-custodian (c7n)
+    "tests/test_c7n_to_cel.py"
+    "tests/test_c7nlib.py"
+  ];
+
+  meta = {
+    description = "Pure Python implementation of the Common Expression Language";
+    homepage = "https://github.com/cloud-custodian/cel-python";
+    changelog = "https://github.com/cloud-custodian/cel-python/releases/tag/${finalAttrs.src.tag}";
+    license = lib.licenses.asl20;
+    maintainers = with lib.maintainers; [ GaetanLepage ];
+  };
+})
diff --git a/pkgs/development/python-modules/chromadb/default.nix b/pkgs/development/python-modules/chromadb/default.nix
index db63f9cfbe18..1c68f44e324d 100644
--- a/pkgs/development/python-modules/chromadb/default.nix
+++ b/pkgs/development/python-modules/chromadb/default.nix
@@ -112,6 +112,10 @@ buildPythonPackage (finalAttrs: {
       sed -i '1i #![recursion_limit = "256"]' rust/segment/src/lib.rs
     '';
 
+  pythonRemoveDeps = [
+    "build"
+  ];
+
   pythonRelaxDeps = [
     "fastapi"
     "posthog"
@@ -134,7 +138,6 @@ buildPythonPackage (finalAttrs: {
 
   dependencies = [
     bcrypt
-    build
     fastapi
     grpcio
     httpx
diff --git a/pkgs/development/python-modules/cmake-parser/default.nix b/pkgs/development/python-modules/cmake-parser/default.nix
new file mode 100644
index 000000000000..2ad7294720c1
--- /dev/null
+++ b/pkgs/development/python-modules/cmake-parser/default.nix
@@ -0,0 +1,46 @@
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+  setuptools,
+  setuptools-scm,
+  attrs,
+  nix-update-script,
+}:
+
+buildPythonPackage (finalAttrs: {
+  pname = "cmake-parser";
+  version = "0.9.2";
+  pyproject = true;
+  __structuredAttrs = true;
+
+  src = fetchFromGitHub {
+    owner = "roehling";
+    repo = "cmake_parser";
+    tag = finalAttrs.version;
+    hash = "sha256-4hJYlnDOuO+Rs1r9/scWK+BZAU9zSH5BTEvkiS3LUh8=";
+  };
+
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
+
+  dependencies = [
+    attrs
+  ];
+
+  pythonImportsCheck = [
+    "cmake_parser"
+  ];
+
+  passthru.updateScript = nix-update-script { };
+
+  meta = {
+    description = "Parse CMake files with Python";
+    homepage = "https://github.com/roehling/cmake_parser";
+    changelog = "https://github.com/roehling/cmake_parser/blob/${finalAttrs.src.rev}/CHANGELOG.rst";
+    license = lib.licenses.asl20;
+    maintainers = with lib.maintainers; [ nim65s ];
+  };
+})
diff --git a/pkgs/development/python-modules/crewai-cli/default.nix b/pkgs/development/python-modules/crewai-cli/default.nix
new file mode 100644
index 000000000000..64beda797437
--- /dev/null
+++ b/pkgs/development/python-modules/crewai-cli/default.nix
@@ -0,0 +1,139 @@
+{
+  lib,
+  buildPythonPackage,
+
+  # build-system
+  hatchling,
+
+  # dependencies
+  appdirs,
+  certifi,
+  click,
+  crewai-core,
+  cryptography,
+  httpx,
+  packaging,
+  pydantic,
+  pydantic-settings,
+  pyjwt,
+  python-dotenv,
+  rich,
+  textual,
+  tomli,
+  tomli-w,
+  uv,
+
+  # tests
+  versionCheckHook,
+
+  # passthru
+  aiohttp,
+  crewai,
+  pytest-asyncio,
+  pytest-recording,
+  pytest-subprocess,
+  pytest-timeout,
+  pytest-xdist,
+  pytestCheckHook,
+  vcrpy,
+  writableTmpDirAsHomeHook,
+}:
+
+buildPythonPackage (finalAttrs: {
+  pname = "crewai-cli";
+  version = "1.15.10";
+  pyproject = true;
+  __structuredAttrs = true;
+
+  inherit (crewai-core) src;
+
+  sourceRoot = "${finalAttrs.src.name}/lib/cli";
+
+  build-system = [
+    hatchling
+  ];
+
+  pythonRelaxDeps = [
+    "click"
+    "crewai-core"
+    "pydantic"
+    "pydantic-settings"
+    "pyjwt"
+    "python-dotenv"
+    "textual"
+    "tomli"
+    "tomli-w"
+    "uv"
+  ];
+  dependencies = [
+    appdirs
+    certifi
+    click
+    crewai-core
+    cryptography
+    httpx
+    packaging
+    pydantic
+    pydantic-settings
+    pyjwt
+    python-dotenv
+    rich
+    textual
+    tomli
+    tomli-w
+    uv
+  ];
+
+  pythonImportsCheck = [ "crewai_cli" ];
+
+  nativeCheckInputs = [
+    versionCheckHook
+  ];
+
+  disabledTests = [
+    # error: Failed to discover managed Python installations
+    # Caused by: Could not read ELF interpreter from any of the following paths: /bin/sh, /usr/bin/env, /bin/dash, /bin/ls
+    "test_create_crew"
+    "test_deploy_with_project_name"
+    "test_deploy_with_remote_keeps_remote_path_when_fetch_fails"
+    "test_deploy_with_remote_keeps_remote_path_when_initial_commit_fails"
+    "test_deploy_with_uuid"
+    "test_json_runner_code_loads_current_cli_package_over_project_env"
+    "test_json_runner_imports_with_older_project_env_crewai_core"
+    "test_missing_crewai_package_shows_full_install_hint"
+    "test_publish_calls_api"
+    "test_publish_metadata_extraction_failure_continues_with_warning"
+
+    # ValueError: Git fetch failed with exit code
+    "test_publish_api_error"
+    "test_publish_failure"
+
+    # AssertionError: assert '"crewai[tools]>=1.15.0,<2.0.0"' in content
+    "test_create_success"
+  ];
+
+  # Circular dependency with crewai
+  passthru.tests = finalAttrs.finalPackage.overrideAttrs (old: {
+    nativeInstallCheckInputs = [
+      aiohttp
+      crewai
+      pytest-asyncio
+      pytest-recording
+      pytest-subprocess
+      pytest-timeout
+      pytest-xdist
+      pytestCheckHook
+      vcrpy
+      writableTmpDirAsHomeHook
+    ];
+  });
+
+  meta = {
+    description = "CLI for CrewAI: scaffold, run, deploy and manage AI agent crews";
+    homepage = "https://github.com/crewAIInc/crewAI/tree/main/lib/cli";
+    changelog = "https://github.com/crewAIInc/crewAI/releases/tag/${finalAttrs.src.tag}";
+    license = lib.licenses.mit;
+    maintainers = with lib.maintainers; [ GaetanLepage ];
+    mainProgram = "crewai";
+  };
+})
diff --git a/pkgs/development/python-modules/crewai-core/default.nix b/pkgs/development/python-modules/crewai-core/default.nix
new file mode 100644
index 000000000000..de9591bca56a
--- /dev/null
+++ b/pkgs/development/python-modules/crewai-core/default.nix
@@ -0,0 +1,92 @@
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+
+  # build-system
+  hatchling,
+
+  # dependencies
+  appdirs,
+  cryptography,
+  httpx,
+  opentelemetry-api,
+  opentelemetry-exporter-otlp-proto-http,
+  opentelemetry-sdk,
+  packaging,
+  portalocker,
+  pydantic,
+  pyjwt,
+  rich,
+  tomli,
+
+  # tests
+  pytestCheckHook,
+}:
+
+buildPythonPackage (finalAttrs: {
+  pname = "crewai-core";
+  version = "1.15.10";
+  pyproject = true;
+  __structuredAttrs = true;
+
+  src = fetchFromGitHub {
+    owner = "crewAIInc";
+    repo = "crewAI";
+    tag = finalAttrs.version;
+    hash = "sha256-O59F1TqQsTW2TBkuUTiNu4f35UeajRVSVc2HomxHK3Q=";
+  };
+
+  sourceRoot = "${finalAttrs.src.name}/lib/crewai-core";
+
+  build-system = [ hatchling ];
+
+  pythonRelaxDeps = [
+    "opentelemetry-api"
+    "opentelemetry-exporter-otlp-proto-http"
+    "opentelemetry-sdk"
+    "portalocker"
+    "pydantic"
+    "tomli"
+  ];
+
+  dependencies = [
+    appdirs
+    cryptography
+    httpx
+    opentelemetry-api
+    opentelemetry-exporter-otlp-proto-http
+    opentelemetry-sdk
+    packaging
+    portalocker
+    pydantic
+    pyjwt
+    rich
+    tomli
+  ];
+
+  pythonImportsCheck = [ "crewai_core" ];
+
+  nativeCheckInputs = [
+    pytestCheckHook
+  ];
+
+  enabledTestPaths = [
+    "tests"
+  ];
+
+  pytestFlags = [
+    # Avoid loading the repository-wide conftest.py (needs many optional test deps)
+    "--confcutdir=tests"
+    # Drop addopts from the repository-wide pyproject.toml (xdist, socket, timeout)
+    "--override-ini=addopts="
+  ];
+
+  meta = {
+    description = "Shared utilities for CrewAI (version, paths, user-data, telemetry, printer)";
+    homepage = "https://github.com/crewAIInc/crewAI/tree/main/lib/crewai-core";
+    changelog = "https://github.com/crewAIInc/crewAI/releases/tag/${finalAttrs.src.tag}";
+    license = lib.licenses.mit;
+    maintainers = with lib.maintainers; [ GaetanLepage ];
+  };
+})
diff --git a/pkgs/development/python-modules/crewai/default.nix b/pkgs/development/python-modules/crewai/default.nix
index 204551a50f69..7e500de2cb1c 100644
--- a/pkgs/development/python-modules/crewai/default.nix
+++ b/pkgs/development/python-modules/crewai/default.nix
@@ -1,7 +1,6 @@
 {
   lib,
   buildPythonPackage,
-  fetchFromGitHub,
   nix-update-script,
 
   # build-system
@@ -11,14 +10,17 @@
   aiofiles,
   aiosqlite,
   appdirs,
+  cel-python,
   chromadb,
   click,
+  crewai-cli,
+  crewai-core,
+  httpx,
   instructor,
   json-repair,
   json5,
   jsonref,
   lancedb,
-  litellm,
   mcp,
   openai,
   opentelemetry-api,
@@ -31,12 +33,14 @@
   pydantic-settings,
   pyjwt,
   python-dotenv,
+  pyyaml,
   regex,
-  textual,
   tokenizers,
   tomli,
   tomli-w,
-  uv,
+
+  # optional-dependencies
+  litellm,
 
   # tests
   a2a-sdk,
@@ -50,34 +54,24 @@
   pytestCheckHook,
   qdrant-client,
   vcrpy,
-  versionCheckHook,
   writableTmpDirAsHomeHook,
 }:
 
 buildPythonPackage (finalAttrs: {
   pname = "crewai";
-  version = "1.14.4";
+  version = "1.15.10";
   pyproject = true;
+  __structuredAttrs = true;
 
-  src = fetchFromGitHub {
-    owner = "crewAIInc";
-    repo = "crewAI";
-    tag = finalAttrs.version;
-    hash = "sha256-QrJM2oVoqos8GMhrn9E6i1m1O1guP/q+51b8NYtJA5Q=";
-  };
+  inherit (crewai-core) src;
 
-  postPatch = ''
-    substituteInPlace ../../conftest.py \
-      --replace-fail \
-        "import vcr.stubs.httpx_stubs as httpx_stubs" \
-        "import vcr.stubs.httpcore_stubs as httpx_stubs" \
-      --replace-fail \
-        "def _patched_make_vcr_request(httpx_request: Any, **kwargs: Any) -> Any:" \
-        "def _patched_make_vcr_request(httpx_request: Any, request_body: Any = None, **kwargs: Any) -> Any:" \
-      --replace-fail \
-        "raw_body = httpx_request.read()" \
-        "raw_body = request_body if request_body is not None else httpx_request.read()"
-  '';
+  postPatch =
+    # The crewai executable is provided by the crewai-cli package (a dependency);
+    # drop the duplicate entry point to avoid a file collision in shared environments.
+    ''
+      substituteInPlace pyproject.toml \
+        --replace-fail 'crewai = "crewai_cli.cli:crewai"' ""
+    '';
 
   sourceRoot = "${finalAttrs.src.name}/lib/crewai";
 
@@ -90,7 +84,6 @@ buildPythonPackage (finalAttrs: {
     "json-repair"
     "json5"
     "lancedb"
-    "litellm"
     "mcp"
     "openai"
     "opentelemetry-api"
@@ -106,21 +99,23 @@ buildPythonPackage (finalAttrs: {
     "tokenizers"
     "tomli"
     "tomli-w"
-    "uv"
   ];
 
   dependencies = [
     aiofiles
     aiosqlite
     appdirs
+    cel-python
     chromadb
     click
+    crewai-cli
+    crewai-core
+    httpx
     instructor
     json-repair
     json5
     jsonref
     lancedb
-    litellm
     mcp
     openai
     opentelemetry-api
@@ -133,19 +128,21 @@ buildPythonPackage (finalAttrs: {
     pydantic-settings
     pyjwt
     python-dotenv
+    pyyaml
     regex
-    textual
     tokenizers
     tomli
     tomli-w
-    uv
   ];
 
+  optional-dependencies = {
+    litellm = [ litellm ];
+  };
+
   pythonImportsCheck = [ "crewai" ];
 
   disabledTestPaths = [
     # Ignore tests that require {chromadb, telemetry, security, test_agent}
-    "tests/cli/test_git.py" # require git
     "tests/test_crew.py" # require require API keys
     "tests/rag/chromadb/test_client.py" # issue with chromadb
     "tests/telemetry/test_telemetry.py" # telemetry need network access
@@ -180,6 +177,7 @@ buildPythonPackage (finalAttrs: {
     "tests/agents/test_lite_agent.py"
 
     # Tests requiring crewai-files
+    "tests/agents/test_agent_executor.py"
     "tests/llms/test_multimodal.py"
     "tests/llms/test_multimodal_integration.py"
     "tests/test_agent_multimodal.py"
@@ -476,16 +474,9 @@ buildPythonPackage (finalAttrs: {
     "test_areset_wrong_client_type"
     "test_adelete_collection"
 
-    # Tests requiring litellm
-    "test_litellm_anthropic_error_handling"
-    "test_litellm_auth_error_handling"
-    "test_crew_agent_executor_litellm_auth_error"
-    "test_agent_with_callbacks"
-    "test_crew_memoization"
-    "test_task_guardrail"
-    "test_crew_name"
-    "test_get_conversion_instructions_non_gpt"
-    "test_supports_function_calling_false"
+    # Tests requiring crewai-tools
+    "test_non_ok_response_becomes_a_tool_failure"
+    "test_ok_response_still_returns_json"
 
     # Tests requiring network
     "test_agent_events_have_event_ids"
@@ -546,13 +537,14 @@ buildPythonPackage (finalAttrs: {
     anthropic
     boto3
     google-genai
-    pytestCheckHook
+    # litellm is an optional dependency upstream, but the test suite requires it
+    litellm
     pytest-asyncio
     pytest-recording
     pytest-xdist
+    pytestCheckHook
     qdrant-client
     vcrpy
-    versionCheckHook
     writableTmpDirAsHomeHook
   ];
 
@@ -574,6 +566,5 @@ buildPythonPackage (finalAttrs: {
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ liberodark ];
     platforms = lib.platforms.linux;
-    mainProgram = "crewai";
   };
 })
diff --git a/pkgs/development/python-modules/databricks-sdk/default.nix b/pkgs/development/python-modules/databricks-sdk/default.nix
index 1ba07027e78e..2addea4ec542 100644
--- a/pkgs/development/python-modules/databricks-sdk/default.nix
+++ b/pkgs/development/python-modules/databricks-sdk/default.nix
@@ -22,7 +22,7 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "databricks-sdk";
-  version = "0.122.0";
+  version = "0.123.0";
   pyproject = true;
   __structuredAttrs = true;
 
@@ -30,7 +30,7 @@ buildPythonPackage (finalAttrs: {
     owner = "databricks";
     repo = "databricks-sdk-py";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-guq9OWQpMd9fFe3/ZNJ4CNgc3ljov17F2WbE564tHBE=";
+    hash = "sha256-mSxTk8wq9Hq9xL20Jt8kWpry5F5SljMIcFsv8UohY1c=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/django-localflavor/default.nix b/pkgs/development/python-modules/django-localflavor/default.nix
index 16561e2d5871..c00292c2676c 100644
--- a/pkgs/development/python-modules/django-localflavor/default.nix
+++ b/pkgs/development/python-modules/django-localflavor/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "django-localflavor";
-  version = "5.0";
+  version = "5.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "django";
     repo = "django-localflavor";
     tag = version;
-    hash = "sha256-eYhkWfxoZlnxhCIaqBhoEt0+SbkZKkUNUAy4p3tYf4A=";
+    hash = "sha256-pvfXZVHL1/uXibfhimF3T76w2KwlwEVhJFe2VXWM55k=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/django-simple-captcha/default.nix b/pkgs/development/python-modules/django-simple-captcha/default.nix
index 56323e781f2b..a6951cb80730 100644
--- a/pkgs/development/python-modules/django-simple-captcha/default.nix
+++ b/pkgs/development/python-modules/django-simple-captcha/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "django-simple-captcha";
-  version = "0.6.3";
+  version = "0.7.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "mbi";
     repo = "django-simple-captcha";
     tag = "v${version}";
-    hash = "sha256-Fee7YfIWGyKMsN7XQz10bjIhbjUYRuY7Oe4Q8n8ILz0=";
+    hash = "sha256-httRO6OYKgo3/E2Z9EFdhuuLqcrcfB3EgxptZ7XDYlc=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/django-tenants/default.nix b/pkgs/development/python-modules/django-tenants/default.nix
index 818ee54866ae..345e01ead7cd 100644
--- a/pkgs/development/python-modules/django-tenants/default.nix
+++ b/pkgs/development/python-modules/django-tenants/default.nix
@@ -2,7 +2,6 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  pyprojectVersionPatchHook,
   setuptools,
   django,
   psycopg,
@@ -10,20 +9,16 @@
 
 buildPythonPackage rec {
   pname = "django-tenants";
-  version = "3.11.2";
+  version = "3.12.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "django-tenants";
     repo = "django-tenants";
     tag = "v${version}";
-    hash = "sha256-J7poXEHbRxhULYwFbV4tktet5wdsvd7RNHgivETy9+8=";
+    hash = "sha256-0HFkLG2GDECiaG9OKYR4V1q5oy0vzmthlKoiSM5IIFc=";
   };
 
-  nativeBuildInputs = [
-    pyprojectVersionPatchHook
-  ];
-
   build-system = [ setuptools ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/django-vcache/default.nix b/pkgs/development/python-modules/django-vcache/default.nix
index 962bee51346c..8a37756f3cdc 100644
--- a/pkgs/development/python-modules/django-vcache/default.nix
+++ b/pkgs/development/python-modules/django-vcache/default.nix
@@ -12,19 +12,19 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "django-vcache";
-  version = "2.3.0";
+  version = "3.1.1";
   pyproject = true;
 
   src = fetchFromGitLab {
     owner = "glitchtip";
     repo = "django-vcache";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-/LyNJlz3Tx6tgQAwY4vIIsDlL2nCvKM6bna2bXyP5So=";
+    hash = "sha256-9KsIijeWC97IAD+xlE78UvSSIUp5DbpOdaDRcw8ZxWQ=";
   };
 
   cargoDeps = rustPlatform.fetchCargoVendor {
     inherit (finalAttrs) src;
-    hash = "sha256-a9+3k6YTotmj+LBO6OyVd2NUh3hpLwpKXJsX7pBxXNE=";
+    hash = "sha256-tpf0r32wNJ/XCmNutoirTobqKgsEX96s4MsI6+p7KlQ=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/dsmr-parser/default.nix b/pkgs/development/python-modules/dsmr-parser/default.nix
index 0abdc91b1741..1dd9f92d7f3a 100644
--- a/pkgs/development/python-modules/dsmr-parser/default.nix
+++ b/pkgs/development/python-modules/dsmr-parser/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "dsmr-parser";
-  version = "1.11.1";
+  version = "1.11.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "ndokter";
     repo = "dsmr_parser";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-2q2e1/xt8a24QmACZUc9zWOnAiFhEYMg+44kOlx1JAk=";
+    hash = "sha256-MIiJwCRIUSrmp+wfJrfCPW0JY22ATfA66uENgPySgCc=";
   };
 
   pythonRelaxDeps = [ "dlms_cosem" ];
diff --git a/pkgs/development/python-modules/eigenpy/default.nix b/pkgs/development/python-modules/eigenpy/default.nix
index 6d518ff7e734..b3eb184358af 100644
--- a/pkgs/development/python-modules/eigenpy/default.nix
+++ b/pkgs/development/python-modules/eigenpy/default.nix
@@ -3,22 +3,17 @@
 
   buildPythonPackage,
   fetchFromGitHub,
-  writableTmpDirAsHomeHook,
   fontconfig,
 
   # nativeBuildInputs
-  cmake,
-  doxygen,
-  graphviz,
-  pkg-config,
   scipy,
 
   # buildInputs
   boost,
+  jrl-cmakemodules,
 
   # propagatedBuildInputs
   eigen,
-  jrl-cmakemodules,
   numpy,
 }:
 
@@ -40,7 +35,7 @@ buildPythonPackage rec {
     "out"
   ];
 
-  cmakeFlags = [
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags ++ [
     "-DINSTALL_DOCUMENTATION=ON"
     "-DBUILD_TESTING=ON"
     "-DBUILD_TESTING_SCIPY=ON"
@@ -51,20 +46,17 @@ buildPythonPackage rec {
   # Fontconfig error: Cannot load default config file: No such file: (null)
   env.FONTCONFIG_FILE = "${fontconfig.out}/etc/fonts/fonts.conf";
 
-  nativeBuildInputs = [
-    cmake
-    doxygen
-    graphviz
-    pkg-config
+  nativeBuildInputs = jrl-cmakemodules.docsNativeBuildInputs ++ [
     scipy
-    writableTmpDirAsHomeHook
   ];
 
-  buildInputs = [ boost ];
+  buildInputs = [
+    boost
+    jrl-cmakemodules
+  ];
 
   propagatedBuildInputs = [
     eigen
-    jrl-cmakemodules
     numpy
   ];
 
diff --git a/pkgs/development/python-modules/energieleser/default.nix b/pkgs/development/python-modules/energieleser/default.nix
index f01d2c2a223a..ec82ab412e1e 100644
--- a/pkgs/development/python-modules/energieleser/default.nix
+++ b/pkgs/development/python-modules/energieleser/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "energieleser";
-  version = "0.1.5";
+  version = "0.1.6";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "nineti-GmbH";
     repo = "energieleser.py";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-vJ4eJaf0ue4N9aXwsPR79sTVt3NM1GKNw5XomhQUUdU=";
+    hash = "sha256-bg+XdASeegWLWU7kjywmMSih3SarVB3Mc2YHVCnU93w=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/etils/default.nix b/pkgs/development/python-modules/etils/default.nix
index 469e2365dc30..cca686975039 100644
--- a/pkgs/development/python-modules/etils/default.nix
+++ b/pkgs/development/python-modules/etils/default.nix
@@ -1,5 +1,6 @@
 {
   lib,
+  stdenv,
   buildPythonPackage,
   fetchFromGitHub,
 
@@ -139,6 +140,10 @@ buildPythonPackage (finalAttrs: {
     "test_array_spec_valid"
     "test_obj"
     "test_spec_like"
+  ]
+  ++ lib.optionals stdenv.hostPlatform.isDarwin [
+    # AssertionError: assert '/tmp/to/something' == '/private/tmp/to/something'
+    "test_repr"
   ];
 
   disabledTestPaths = [
diff --git a/pkgs/development/python-modules/example-robot-data/default.nix b/pkgs/development/python-modules/example-robot-data/default.nix
index fe452c73b439..f8ba30e176e9 100644
--- a/pkgs/development/python-modules/example-robot-data/default.nix
+++ b/pkgs/development/python-modules/example-robot-data/default.nix
@@ -27,7 +27,6 @@ toPythonModule (
     propagatedBuildInputs = [
       pinocchio
     ]
-    ++ super.propagatedBuildInputs
     ++ lib.optional buildStandalone example-robot-data;
 
     nativeCheckInputs = [
diff --git a/pkgs/development/python-modules/exllamav3/default.nix b/pkgs/development/python-modules/exllamav3/default.nix
index c339bd7165e1..86cd146e35ee 100644
--- a/pkgs/development/python-modules/exllamav3/default.nix
+++ b/pkgs/development/python-modules/exllamav3/default.nix
@@ -27,14 +27,14 @@ let
 in
 buildPythonPackage.override { inherit (torch) stdenv; } (finalAttrs: {
   pname = "exllamav3";
-  version = "1.2.1";
+  version = "1.3.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "turboderp-org";
     repo = "exllamav3";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-ErsCtCM/T1YuCQAwrKhc860ETLgiS5Qu4nrQSuEzsPk=";
+    hash = "sha256-pWdh5fiGZEkdSLXvI5DAEdj6XmBFquzew57L1YIsEg8=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/fastbencode/default.nix b/pkgs/development/python-modules/fastbencode/default.nix
index 79d8045bdb0b..0428ff424fe1 100644
--- a/pkgs/development/python-modules/fastbencode/default.nix
+++ b/pkgs/development/python-modules/fastbencode/default.nix
@@ -12,19 +12,19 @@
 
 buildPythonPackage rec {
   pname = "fastbencode";
-  version = "0.3.10";
+  version = "0.3.11";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "breezy-team";
     repo = "fastbencode";
     tag = "v${version}";
-    hash = "sha256-e+Ei+UIJ5sve6k3ApPJ2nswTgZLkzxZmpthK/f/rfCs=";
+    hash = "sha256-hQwu0VKJ6tp155meE5JXbk5xEmcfktBHgUqVJYs2exM=";
   };
 
   cargoDeps = rustPlatform.fetchCargoVendor {
     inherit pname version src;
-    hash = "sha256-dqD/QF6/XCB9H/QkEobfIOo9S663fh9AHUuHqCoEcLM=";
+    hash = "sha256-QHu3ryg7beYVBSWFxkX7CaJLcsrmGpGAm9Ee9ZHKTgk=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/fressnapftracker/default.nix b/pkgs/development/python-modules/fressnapftracker/default.nix
index 53b1b86b88dc..d1fc2d7395b8 100644
--- a/pkgs/development/python-modules/fressnapftracker/default.nix
+++ b/pkgs/development/python-modules/fressnapftracker/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "fressnapftracker";
-  version = "0.2.2";
+  version = "0.3.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "eifinger";
     repo = "fressnapftracker";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-gJsE/1HnUXEDa5Y7eLtHexx+G00MGQDZJu3pui9OeMM=";
+    hash = "sha256-4ZsK/yW+E4nwP5S300FPXnfPe11fIL2ULII2SkhLAys=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/funsor/default.nix b/pkgs/development/python-modules/funsor/default.nix
index 04ece9b20542..4c57b7fbb58c 100644
--- a/pkgs/development/python-modules/funsor/default.nix
+++ b/pkgs/development/python-modules/funsor/default.nix
@@ -2,7 +2,6 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  fetchpatch,
 
   # build-system
   setuptools,
@@ -29,7 +28,7 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "funsor";
-  version = "0.4.7";
+  version = "0.4.8";
   pyproject = true;
   __structuredAttrs = true;
 
@@ -37,15 +36,15 @@ buildPythonPackage (finalAttrs: {
     owner = "pyro-ppl";
     repo = "funsor";
     tag = finalAttrs.version;
-    hash = "sha256-0STJv1OOliJaHdmYUXdnOnocH3hVXceH/Uw5nILvT+U=";
+    hash = "sha256-iTkDd6vz4wesY3jABSMxLtTKioP98DhGB0plLL+vhNY=";
   };
 
   patches = [
-    # Compatibility with torch >= 2.5 (arg_constraints is now a property)
-    (fetchpatch {
-      url = "https://github.com/pyro-ppl/funsor/commit/c5e2a48d73cad4e98058147af4090171272a44e5.patch";
-      hash = "sha256-sTR+hbJtS0Th5sIqlvB2bReEC0wnEbnB7gAiZKiqjAQ=";
-    })
+    # Compatibility with torch >= 2.5, where `Uniform.arg_constraints` is a property.
+    # Remaining part of the pending upstream PR https://github.com/pyro-ppl/funsor/pull/610
+    # (the `Uniform` parameter registration was already merged as part of
+    # https://github.com/pyro-ppl/funsor/pull/614).
+    ./torch-arg-constraints-property.patch
   ];
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/funsor/torch-arg-constraints-property.patch b/pkgs/development/python-modules/funsor/torch-arg-constraints-property.patch
new file mode 100644
index 000000000000..e6dd756af6d1
--- /dev/null
+++ b/pkgs/development/python-modules/funsor/torch-arg-constraints-property.patch
@@ -0,0 +1,52 @@
+diff --git a/funsor/distribution.py b/funsor/distribution.py
+index 5a48ecb..cfb2d2e 100644
+--- a/funsor/distribution.py
++++ b/funsor/distribution.py
+@@ -309,7 +309,10 @@ class Distribution(Funsor, metaclass=DistributionMeta):
+     @classmethod
+     @functools.lru_cache(maxsize=5000)
+     def _infer_param_domain(cls, name, raw_shape):
+-        support = cls.dist_class.arg_constraints.get(name, None)
++        constraints = getattr(cls.dist_class, "arg_constraints", {})
++        if isinstance(constraints, property):
++            constraints = {}
++        support = constraints.get(name, None)
+         # XXX: if the backend does not have the same definition of constraints, we should
+         # define backend-specific distributions and overide these `infer_value_domain`,
+         # `infer_param_domain` methods.
+@@ -330,9 +333,8 @@ class Distribution(Funsor, metaclass=DistributionMeta):
+         # for discrete multivariate distributions in Pyro
+         elif support_name == "Real":
+             if name == "logits" and (
+-                "probs" in cls.dist_class.arg_constraints
+-                and type(cls.dist_class.arg_constraints["probs"]).__name__.lstrip("_")
+-                == "Simplex"
++                "probs" in constraints
++                and type(constraints.get("probs")).__name__.lstrip("_") == "Simplex"
+             ):
+                 output = Reals[raw_shape[-1 - event_dim :]]
+             else:
+@@ -377,10 +379,13 @@ def make_dist(
+     backend_dist_class, param_names=(), generate_eager=True, generate_to_funsor=True
+ ):
+     if not param_names:
++        constraints = getattr(backend_dist_class, "arg_constraints", {})
++        if isinstance(constraints, property):
++            constraints = {}
+         param_names = tuple(
+             name
+             for name in inspect.getfullargspec(backend_dist_class.__init__)[0][1:]
+-            if name in backend_dist_class.arg_constraints
++            if name in constraints
+         )
+ 
+     @makefun.with_signature(
+@@ -608,7 +613,7 @@ class CoerceDistributionToFunsor:
+     def __call__(self, cls, args, kwargs):
+         # Check whether distribution class takes any tensor inputs.
+         arg_constraints = getattr(cls, "arg_constraints", None)
+-        if not arg_constraints:
++        if not arg_constraints or isinstance(arg_constraints, property):
+             return
+ 
+         # Check whether any tensor inputs are actually funsors.
diff --git a/pkgs/development/python-modules/hass-client/default.nix b/pkgs/development/python-modules/hass-client/default.nix
index ba0fdc3aec80..5b8ebf454ffa 100644
--- a/pkgs/development/python-modules/hass-client/default.nix
+++ b/pkgs/development/python-modules/hass-client/default.nix
@@ -7,25 +7,28 @@
   fetchFromGitHub,
   lib,
   orjson,
+  pyprojectVersionPatchHook,
+  pytest-asyncio,
+  pytest-cov-stub,
+  pytestCheckHook,
   setuptools,
 }:
 
-buildPythonPackage rec {
+buildPythonPackage (finalAttrs: {
   pname = "hass-client";
-  version = "1.2.3";
+  version = "1.3.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "music-assistant";
     repo = "python-hass-client";
-    tag = version;
-    hash = "sha256-uCVwxa/KTiOmaexmdeynL2LSqBhDu8Zfre+Nh9Oauiw=";
+    tag = finalAttrs.version;
+    hash = "sha256-mrS3kuG/6ZE02B0Ua10AAAsgVBrEDRJxNfmIHT+EHWw=";
   };
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace-fail "1.0.0" "${version}"
-  '';
+  nativeBuildInputs = [
+    pyprojectVersionPatchHook
+  ];
 
   build-system = [
     setuptools
@@ -48,14 +51,17 @@ buildPythonPackage rec {
     "hass_client"
   ];
 
-  # upstream has no tests
-  doCheck = false;
+  nativeCheckInputs = [
+    pytest-asyncio
+    pytest-cov-stub
+    pytestCheckHook
+  ];
 
   meta = {
-    changelog = "https://github.com/music-assistant/python-hass-client/releases/tag/${version}";
+    changelog = "https://github.com/music-assistant/python-hass-client/releases/tag/${finalAttrs.version}";
     description = "Basic client for connecting to Home Assistant over websockets and REST";
     homepage = "https://github.com/music-assistant/python-hass-client";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ dotlambda ];
   };
-}
+})
diff --git a/pkgs/development/python-modules/iamdata/default.nix b/pkgs/development/python-modules/iamdata/default.nix
index 00e924d73860..fb58f9f99440 100644
--- a/pkgs/development/python-modules/iamdata/default.nix
+++ b/pkgs/development/python-modules/iamdata/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "iamdata";
-  version = "0.1.202607301";
+  version = "0.1.202608031";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "cloud-copilot";
     repo = "iam-data-python";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-lEDf8Su+wWwS1PG3zrU26aL4rtXtFE7itxTd7aLqP+0=";
+    hash = "sha256-pOaSqBOTIwEDqXMHVeCXcSckbbpKaaa7UkwibnOhLhQ=";
   };
 
   __darwinAllowLocalNetworking = true;
diff --git a/pkgs/development/python-modules/ibm-cloud-sdk-core/default.nix b/pkgs/development/python-modules/ibm-cloud-sdk-core/default.nix
index 5d10f3739173..d19cf94ba4f0 100644
--- a/pkgs/development/python-modules/ibm-cloud-sdk-core/default.nix
+++ b/pkgs/development/python-modules/ibm-cloud-sdk-core/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "ibm-cloud-sdk-core";
-  version = "3.25.0";
+  version = "3.26.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "IBM";
     repo = "python-sdk-core";
     tag = "v${version}";
-    hash = "sha256-UA4xZ9doaz/4yYdbXJoevXrdzsrfuv/nhSd2+rkHAQ4=";
+    hash = "sha256-indY3DCATi3Czs8Btlyhx3H1ZsMZSbgddIa9XC06FEI=";
   };
 
   pythonRelaxDeps = [ "requests" ];
diff --git a/pkgs/development/python-modules/lance-namespace-urllib3-client/default.nix b/pkgs/development/python-modules/lance-namespace-urllib3-client/default.nix
index d059a9441e63..856391e06be0 100644
--- a/pkgs/development/python-modules/lance-namespace-urllib3-client/default.nix
+++ b/pkgs/development/python-modules/lance-namespace-urllib3-client/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "lance-namespace-urllib3-client";
-  version = "0.8.6";
+  version = "0.9.0";
   pyproject = true;
   __structuredAttrs = true;
 
@@ -26,7 +26,7 @@ buildPythonPackage (finalAttrs: {
     owner = "lancedb";
     repo = "lance-namespace";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-QYzVsarjTg2arNNuCFbVgtA7rfLTm6AJD3liNr3QuSU=";
+    hash = "sha256-8BfKK7k7NDptFYjaJ312QID/tIr24y3oGTmxHz/b2w0=";
   };
 
   sourceRoot = "${finalAttrs.src.name}/python/lance_namespace_urllib3_client";
diff --git a/pkgs/development/python-modules/lance-namespace/default.nix b/pkgs/development/python-modules/lance-namespace/default.nix
index 1f570a3a5be5..371949cc66fc 100644
--- a/pkgs/development/python-modules/lance-namespace/default.nix
+++ b/pkgs/development/python-modules/lance-namespace/default.nix
@@ -30,7 +30,7 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "lance-namespace";
-  version = "0.8.6";
+  version = "0.9.0";
   pyproject = true;
   __structuredAttrs = true;
 
@@ -38,7 +38,7 @@ buildPythonPackage (finalAttrs: {
     owner = "lancedb";
     repo = "lance-namespace";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-QYzVsarjTg2arNNuCFbVgtA7rfLTm6AJD3liNr3QuSU=";
+    hash = "sha256-8BfKK7k7NDptFYjaJ312QID/tIr24y3oGTmxHz/b2w0=";
   };
 
   sourceRoot = "${finalAttrs.src.name}/python/lance_namespace";
diff --git a/pkgs/development/python-modules/lancedb/default.nix b/pkgs/development/python-modules/lancedb/default.nix
index d06a03ae56ba..096766b79646 100644
--- a/pkgs/development/python-modules/lancedb/default.nix
+++ b/pkgs/development/python-modules/lancedb/default.nix
@@ -42,7 +42,7 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "lancedb";
-  version = "0.32.0";
+  version = "0.36.0";
   pyproject = true;
   __structuredAttrs = true;
 
@@ -50,16 +50,36 @@ buildPythonPackage (finalAttrs: {
     owner = "lancedb";
     repo = "lancedb";
     tag = "python-v${finalAttrs.version}";
-    hash = "sha256-OIoQCk0YlWpaaau4AiWxarvH4oy1rAjaS9yvs3mIzzo=";
+    hash = "sha256-JOUrLHoVBZs4B8UGYFZIs00kzBnxFFAkTXFIz2bOZ7w=";
   };
 
   buildAndTestSubdir = "python";
 
   cargoDeps = rustPlatform.fetchCargoVendor {
     inherit (finalAttrs) pname version src;
-    hash = "sha256-rfAhvC6byg134NF21CR5n0A0DL42CLGy7VvHi9aZUrw=";
+    hash = "sha256-KEczUf/e3+Eb53pouOzajp+yVjWctDUNbdVEgQVoCZE=";
   };
 
+  # `lance-linalg`'s AVX-512 VNNI u8-distance kernels call `_mm512_dpbusd_epi32` /
+  # `_mm512_dpwssd_epi32`. With the current toolchain, stdarch's signature for these intrinsics
+  # mismatches LLVM's `llvm.x86.avx512.vpdpbusd.512`, so the crate fails to compile.
+  # Drop the AVX-512 VNNI dispatch branch: the kernels then become dead code (their module is
+  # crate-private and otherwise only used from `#[cfg(test)]`, which is not built for
+  # dependencies), so they are never codegen'd and runtime dispatch falls back to the equivalent
+  # AVX2 / scalar kernels.
+  postPatch = ''
+    lanceDistance="$cargoDepsCopy/source-registry-0/lance-linalg-9.0.0/src/distance"
+
+    substituteInPlace "$lanceDistance/dot_u8.rs" \
+      --replace-fail "return |a, b| unsafe { x86::dot_u8_avx512_vnni(a, b) };" ""
+
+    substituteInPlace "$lanceDistance/l2_u8.rs" \
+      --replace-fail "return |a, b| unsafe { x86::l2_u8_avx512_vnni(a, b) };" ""
+
+    substituteInPlace "$lanceDistance/cosine_u8.rs" \
+      --replace-fail "return |a, b| unsafe { x86::cosine_u8_accum_avx512_vnni(a, b) };" ""
+  '';
+
   build-system = [ rustPlatform.maturinBuildHook ];
 
   nativeBuildInputs = [
@@ -110,7 +130,7 @@ buildPythonPackage (finalAttrs: {
   disabledTests = [
     # Requires internet access
     # RuntimeError: lance error: LanceError(IO): Generic S3 error
-    "test_bucket_without_dots_passes"
+    "test_bucket_without_dots_is_not_rejected"
 
     # lance_namespace.errors.UnsupportedOperationError: Not supported: create_empty_table
     "TestAsyncNamespaceConnection"
diff --git a/pkgs/development/python-modules/langgraph-runtime-inmem/default.nix b/pkgs/development/python-modules/langgraph-runtime-inmem/default.nix
index 2d4495724662..b71f232b093c 100644
--- a/pkgs/development/python-modules/langgraph-runtime-inmem/default.nix
+++ b/pkgs/development/python-modules/langgraph-runtime-inmem/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "langgraph-runtime-inmem";
-  version = "0.31.1";
+  version = "0.31.2";
   pyproject = true;
   __structuredAttrs = true;
 
@@ -22,7 +22,7 @@ buildPythonPackage (finalAttrs: {
   src = fetchPypi {
     pname = "langgraph_runtime_inmem";
     inherit (finalAttrs) version;
-    hash = "sha256-mNTJgdiFkQgOgy+681ALxQOMceo3jWn+cfBvH67weAU=";
+    hash = "sha256-VE7gXsjV+pXhz85rZnD9mhgwp5QRXvxEjdgF7tjNBAE=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/marisa/default.nix b/pkgs/development/python-modules/marisa/default.nix
index 10d7a790ad21..0f2e02d25294 100644
--- a/pkgs/development/python-modules/marisa/default.nix
+++ b/pkgs/development/python-modules/marisa/default.nix
@@ -13,6 +13,13 @@ buildPythonPackage {
 
   patches = marisa.patches or [ ];
 
+  # fix The 'marisa' derivation has version '0.3.1' but .dist-info/METADATA specifies version '0.0.0'.
+  postPatch = ''
+    substituteInPlace bindings/python/setup.py --replace-fail \
+      'setup(name = "marisa",' \
+      'setup(name = "marisa", version = "${marisa.version}"',
+  '';
+
   build-system = [ setuptools ];
 
   nativeBuildInputs = [ swig ];
diff --git a/pkgs/development/python-modules/modelscope/default.nix b/pkgs/development/python-modules/modelscope/default.nix
index 65328d8b3903..e4f153bce457 100644
--- a/pkgs/development/python-modules/modelscope/default.nix
+++ b/pkgs/development/python-modules/modelscope/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "modelscope";
-  version = "1.38.1";
+  version = "1.39.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "modelscope";
     repo = "modelscope";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-BTiK6rk9j5Wh6DZZ8eufzAyP8wWCEfIzQKeJ3fJzsjg=";
+    hash = "sha256-tkwgn3EeR6SVIcOIMJ2U+ktFAckhaFLubRgteO4BGxA=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/nanoeigenpy/default.nix b/pkgs/development/python-modules/nanoeigenpy/default.nix
index f5e4424dc825..cb0bc0f29bc3 100644
--- a/pkgs/development/python-modules/nanoeigenpy/default.nix
+++ b/pkgs/development/python-modules/nanoeigenpy/default.nix
@@ -6,8 +6,6 @@
   python,
 
   # nativeBuildInputs
-  cmake,
-  doxygen,
   nanobind,
 
   # propagatedBuildInputs
@@ -50,7 +48,7 @@ buildPythonPackage rec {
     "out"
   ];
 
-  cmakeFlags = [
+  cmakeFlags = jrl-cmakemodules.docsCmakeFlags ++ [
     (lib.cmakeBool "INSTALL_DOCUMENTATION" true)
     (lib.cmakeBool "BUILD_TESTING" true)
     (lib.cmakeBool "BUILD_WITH_CHOLMOD_SUPPORT" true)
@@ -62,16 +60,11 @@ buildPythonPackage rec {
 
   strictDeps = true;
 
-  nativeBuildInputs = [
-    cmake
-    doxygen
-    nanobind
-  ];
-
+  buildInputs = [ jrl-cmakemodules ];
+  nativeBuildInputs = jrl-cmakemodules.docsNativeBuildInputs ++ [ nanobind ];
   propagatedBuildInputs = [
     suitesparse
     eigen
-    jrl-cmakemodules
   ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/nicegui-highcharts/default.nix b/pkgs/development/python-modules/nicegui-highcharts/default.nix
index 107efc786a6a..c61759f69041 100644
--- a/pkgs/development/python-modules/nicegui-highcharts/default.nix
+++ b/pkgs/development/python-modules/nicegui-highcharts/default.nix
@@ -5,6 +5,7 @@
   fetchFromGitHub,
   nicegui,
   hatchling,
+  pyprojectVersionPatchHook,
 }:
 
 buildPythonPackage (finalAttrs: {
@@ -23,6 +24,8 @@ buildPythonPackage (finalAttrs: {
 
   build-system = [ hatchling ];
 
+  nativeBuildInputs = [ pyprojectVersionPatchHook ];
+
   dependencies = [
     docutils
     nicegui
diff --git a/pkgs/development/python-modules/pylance/default.nix b/pkgs/development/python-modules/pylance/default.nix
index 2016c83e9c24..5f1d4861de29 100644
--- a/pkgs/development/python-modules/pylance/default.nix
+++ b/pkgs/development/python-modules/pylance/default.nix
@@ -35,7 +35,7 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "pylance";
-  version = "8.0.0";
+  version = "9.0.0";
   pyproject = true;
   __structuredAttrs = true;
 
@@ -43,7 +43,7 @@ buildPythonPackage (finalAttrs: {
     owner = "lancedb";
     repo = "lance";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-pxggvF23u3Wfm6YdaHwbDUZDUwtJ4tOaTLViUfGZ0B8=";
+    hash = "sha256-G4BcK/con6a1MOlA9pB3+uI8YULLNg71G8bFLKhUedg=";
   };
 
   sourceRoot = "${finalAttrs.src.name}/python";
@@ -55,9 +55,29 @@ buildPythonPackage (finalAttrs: {
       src
       sourceRoot
       ;
-    hash = "sha256-VSy1cOshPLAic+1HkTGiavdNRffiEVAlWThNeebJSyg=";
+    hash = "sha256-IzB+kzjAEWQpA0gCyKAXI+5XAJK00AV3alFRgastbPM=";
   };
 
+  # `lance-linalg`'s AVX-512 VNNI u8-distance kernels call `_mm512_dpbusd_epi32` /
+  # `_mm512_dpwssd_epi32`. With the current toolchain, stdarch's signature for these intrinsics
+  # mismatches LLVM's `llvm.x86.avx512.vpdpbusd.512`, so the crate fails to compile.
+  # Drop the AVX-512 VNNI dispatch branch: the kernels then become dead code (their module is
+  # crate-private and otherwise only used from `#[cfg(test)]`, which is not built for
+  # dependencies), so they are never codegen'd and runtime dispatch falls back to the equivalent
+  # AVX2 / scalar kernels.
+  postPatch = ''
+    lanceDistance="../rust/lance-linalg/src/distance"
+
+    substituteInPlace "$lanceDistance/dot_u8.rs" \
+      --replace-fail "return |a, b| unsafe { x86::dot_u8_avx512_vnni(a, b) };" ""
+
+    substituteInPlace "$lanceDistance/l2_u8.rs" \
+      --replace-fail "return |a, b| unsafe { x86::l2_u8_avx512_vnni(a, b) };" ""
+
+    substituteInPlace "$lanceDistance/cosine_u8.rs" \
+      --replace-fail "return |a, b| unsafe { x86::cosine_u8_accum_avx512_vnni(a, b) };" ""
+  '';
+
   nativeBuildInputs = [
     pkg-config
     protobuf # for protoc
@@ -74,8 +94,10 @@ buildPythonPackage (finalAttrs: {
     protobuf
   ];
 
-  pythonRelaxDeps = [ "pyarrow" ];
-
+  pythonRelaxDeps = [
+    "lance-namespace"
+    "pyarrow"
+  ];
   dependencies = [
     lance-namespace
     numpy
diff --git a/pkgs/development/python-modules/pysbd/default.nix b/pkgs/development/python-modules/pysbd/default.nix
index 09e666419918..1f6509265b26 100644
--- a/pkgs/development/python-modules/pysbd/default.nix
+++ b/pkgs/development/python-modules/pysbd/default.nix
@@ -2,36 +2,44 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
+  setuptools,
+  pytestCheckHook,
   tqdm,
   spacy,
 }:
 
-buildPythonPackage rec {
+buildPythonPackage (finalAttrs: {
   pname = "pysbd";
   version = "0.3.4";
-  format = "setuptools";
+  pyproject = true;
+
+  __structuredAttrs = true;
 
   # provides no sdist on pypi
   src = fetchFromGitHub {
     owner = "nipunsadvilkar";
     repo = "pySBD";
-    rev = "v${version}";
-    sha256 = "12p7qm237z56hw4zr03n8rycgfymhki2m9c4w3ib0mvqq122a5dp";
+    tag = "v${finalAttrs.version}";
+    hash = "sha256-txUlRMB4V7Di4ISlKuKE1bvHfEZ2gPwJh6b8M0TF54o=";
   };
 
-  nativeCheckInputs = [
-    tqdm
-    spacy
+  build-system = [
+    setuptools
   ];
 
-  doCheck = false; # requires pyconll and blingfire
+  nativeCheckInputs = [
+    pytestCheckHook
+    spacy
+    tqdm
+  ];
 
   pythonImportsCheck = [ "pysbd" ];
 
   meta = {
     description = "Pysbd (Python Sentence Boundary Disambiguation) is a rule-based sentence boundary detection that works out-of-the-box across many languages";
     homepage = "https://github.com/nipunsadvilkar/pySBD";
+    changelog = "https://github.com/nipunsadvilkar/pySBD/blob/${finalAttrs.src.tag}/CHANGELOG.md";
     license = lib.licenses.mit;
     teams = [ lib.teams.tts ];
   };
-}
+})
diff --git a/pkgs/development/python-modules/pythonkuma/default.nix b/pkgs/development/python-modules/pythonkuma/default.nix
index 72d4bbc8b87c..9b86ae19f3d7 100644
--- a/pkgs/development/python-modules/pythonkuma/default.nix
+++ b/pkgs/development/python-modules/pythonkuma/default.nix
@@ -40,7 +40,7 @@ buildPythonPackage (finalAttrs: {
   meta = {
     description = "Simple Python wrapper for Uptime Kuma";
     homepage = "https://github.com/tr4nt0r/pythonkuma";
-    changelog = "https://github.com/tr4nt0r/pythonkuma/releases/tag/v${finalAttrs.src.tag}";
+    changelog = "https://github.com/tr4nt0r/pythonkuma/releases/tag/${finalAttrs.src.tag}";
     license = lib.licenses.mit;
     maintainers = [ lib.maintainers.jamiemagee ];
   };
diff --git a/pkgs/development/python-modules/resvg-py/default.nix b/pkgs/development/python-modules/resvg-py/default.nix
index 6d30ded2d52e..3670f085f13e 100644
--- a/pkgs/development/python-modules/resvg-py/default.nix
+++ b/pkgs/development/python-modules/resvg-py/default.nix
@@ -12,19 +12,19 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "resvg-py";
-  version = "0.3.3";
+  version = "0.3.4";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "baseplate-admin";
     repo = "resvg-py";
     tag = finalAttrs.version;
-    hash = "sha256-XYV3XVLZNlCGPvvYPtyr4UX+9yuXnV7ZWwqt2I/rxTc=";
+    hash = "sha256-SRY22I4wK3v8RrwkS3/5YjBe+IRLnUS/KYYThDUByXY=";
   };
 
   cargoDeps = rustPlatform.fetchCargoVendor {
     inherit (finalAttrs) pname version src;
-    hash = "sha256-v7Y+Kh8Z5S5gn8zoijjwKq8UZGT36azltC62m9xCHiY=";
+    hash = "sha256-5gyzo48SEct7kaN9ckectoHsuS1EJcJOdT+dxpKw+QQ=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/sqlfmt/default.nix b/pkgs/development/python-modules/sqlfmt/default.nix
index 05432ca9b957..68cda3e0e04d 100644
--- a/pkgs/development/python-modules/sqlfmt/default.nix
+++ b/pkgs/development/python-modules/sqlfmt/default.nix
@@ -26,20 +26,19 @@
 
 buildPythonPackage (finalAttrs: {
   pname = "sqlfmt";
-  version = "0.30.0";
+  version = "0.31.0";
   pyproject = true;
+  __structuredAttrs = true;
 
   src = fetchFromGitHub {
     owner = "tconbeer";
     repo = "sqlfmt";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-/8BTH2nuqO+du6PsTPB59L21HvvAIZKDcG1kV9XHxsg=";
+    hash = "sha256-nbgLzeMOXgiXtvV/XHu1I0LkwwaTrzj8ga6EtoZuvRk=";
   };
 
   build-system = [ hatchling ];
 
-  pythonRelaxDeps = [ "click" ];
-
   dependencies = [
     click
     jinja2
@@ -61,13 +60,10 @@ buildPythonPackage (finalAttrs: {
     versionCheckHook
     writableTmpDirAsHomeHook
   ]
-  ++ lib.flatten (builtins.attrValues finalAttrs.passthru.optional-dependencies);
+  ++ lib.concatAttrValues finalAttrs.passthru.optional-dependencies;
 
-  disabledTestPaths = [
-    # TypeError: CliRunner.__init__() got an unexpected keyword argument 'mix_stderr'
-    "tests/functional_tests/test_end_to_end.py"
-    "tests/unit_tests/test_cli.py"
-  ];
+  # importlib.metadata.PackageNotFoundError: No package metadata was found for sqlfmt
+  dontCheckPythonMetadata = true;
 
   meta = {
     description = "Formatter for dbt SQL files";
diff --git a/pkgs/development/python-modules/stripe/default.nix b/pkgs/development/python-modules/stripe/default.nix
index 050db17d7a55..b6a50ee469de 100644
--- a/pkgs/development/python-modules/stripe/default.nix
+++ b/pkgs/development/python-modules/stripe/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "stripe";
-  version = "15.3.1";
+  version = "15.4.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-L5qNlh5cLsGRSftOC0fZcJ0BSmhZLNsfTv0ESryNI1k=";
+    hash = "sha256-+UwngKdyjF+0l4ng+7GOmEJn+T+nJOhACzGuvzbQGx4=";
   };
 
   build-system = [ flit-core ];
diff --git a/pkgs/development/python-modules/syne-tune/default.nix b/pkgs/development/python-modules/syne-tune/default.nix
index 21645320fe63..c788e5d43a6e 100644
--- a/pkgs/development/python-modules/syne-tune/default.nix
+++ b/pkgs/development/python-modules/syne-tune/default.nix
@@ -1,6 +1,5 @@
 {
   lib,
-  stdenv,
   buildPythonPackage,
   fetchFromGitHub,
 
@@ -11,119 +10,65 @@
   dill,
   numpy,
   pandas,
+  psutil,
+  scikit-learn,
   sortedcontainers,
+  statsmodels,
+  tqdm,
   typing-extensions,
+  xgboost,
 
-  # optional-dependencies
-  autograd,
+  # tests
   botorch,
-  # configspace,
   fastparquet,
   h5py,
   huggingface-hub,
-  matplotlib,
   pymoo,
-  scikit-learn,
-  scipy,
-  # smac,
-  statsmodels,
-  xgboost,
-  # yahpo-gym,
-
-  # tests
-  pytestCheckHook,
   pytest-timeout,
-  ray,
+  pytestCheckHook,
   writableTmpDirAsHomeHook,
 }:
 buildPythonPackage (finalAttrs: {
   pname = "syne-tune";
-  version = "0.15.0";
+  version = "0.16.0";
   pyproject = true;
+  __structuredAttrs = true;
 
   src = fetchFromGitHub {
     owner = "syne-tune";
     repo = "syne-tune";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-UNBpfC+aLXhkbyvCG2K00yedJnpYpfldqisZ/wDPtuA=";
+    hash = "sha256-fejG/KWWT6HrGCGzGh4p/Q3kzIDgYbRgfwGQf5sgKic=";
   };
 
   build-system = [
     setuptools
   ];
 
-  pythonRelaxDeps = [
-    "numpy"
-  ];
-
   dependencies = [
     dill
     numpy
     pandas
+    psutil
+    scikit-learn
     sortedcontainers
+    statsmodels
+    tqdm
     typing-extensions
+    xgboost
   ];
 
-  optional-dependencies = lib.fix (self: {
-    blackbox-repository = [
-      fastparquet
-      h5py
-      huggingface-hub
-      numpy
-      pandas
-      scikit-learn
-      xgboost
-    ];
-    bore = [
-      scikit-learn
-      xgboost
-    ];
-    botorch = [ botorch ];
-    gpsearchers = [
-      autograd
-      scipy
-    ];
-    kde = [ statsmodels ];
-    moo = [
-      pymoo
-      scipy
-    ];
-    sklearn = [ scikit-learn ];
-    # smac = [ smac swig ]; # smac unavailable on nixpkgs
-    visual = [ matplotlib ];
-    # yahpo = [ configspace onnxruntime pandas pyyaml yahpo-gym ]; # yahpo-gym unavailable on nixpkgs
-  });
+  pythonImportsCheck = [ "syne_tune" ];
 
   nativeCheckInputs = [
-    pytestCheckHook
+    botorch
+    fastparquet
+    h5py
+    huggingface-hub
+    pymoo
     pytest-timeout
-    ray
+    pytestCheckHook
     writableTmpDirAsHomeHook
-  ]
-  ++ ray.optional-dependencies.tune
-  ++ finalAttrs.passthru.optional-dependencies.blackbox-repository
-  ++ finalAttrs.passthru.optional-dependencies.bore
-  ++ finalAttrs.passthru.optional-dependencies.botorch
-  ++ finalAttrs.passthru.optional-dependencies.gpsearchers
-  ++ finalAttrs.passthru.optional-dependencies.kde
-  ++ finalAttrs.passthru.optional-dependencies.sklearn;
-
-  disabledTests = [
-    # NameError: name 'HV' is not defined
-    # these require pkg `pymoo` and adding `pymoo` raises:
-    # setuptools.errors.PackageDiscoveryError: Multiple top-level packages discovered in a flat-layout: ['cma', 'notebooks'].
-    "test_append_hypervolume_indicator"
-    "test_hypervolume"
-    "test_hypervolume_progress"
-    "test_hypervolume_simple"
-  ]
-  ++ lib.optionals stdenv.hostPlatform.isDarwin [
-    # assert np.float64(1.0114686865847489e-12) < 1e-12
-    "test_cholesky_factorization"
-  ];
-
-  pythonImportsCheck = [
-    "syne_tune"
   ];
 
   meta = {
diff --git a/pkgs/development/python-modules/whenever/default.nix b/pkgs/development/python-modules/whenever/default.nix
index 2d6056d1f890..b76997879701 100644
--- a/pkgs/development/python-modules/whenever/default.nix
+++ b/pkgs/development/python-modules/whenever/default.nix
@@ -19,19 +19,19 @@
 
 buildPythonPackage rec {
   pname = "whenever";
-  version = "0.10.3";
+  version = "0.10.4";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "ariebovenberg";
     repo = "whenever";
     tag = version;
-    hash = "sha256-CBNk69vS4BqavwatOoA312/6M3EnARIzL7C62KrIvXY=";
+    hash = "sha256-yDI5TAnEyVPNYXqsCEitFrQnk+Ed0CyRKcCykxFqeWU=";
   };
 
   cargoDeps = rustPlatform.fetchCargoVendor {
     inherit src;
-    hash = "sha256-bmKUeVZwaqCN81v1YDnz66ZsUE8VTMBHlph6ZootKu8=";
+    hash = "sha256-ZJhHIY9oFGGfK0XdZtzH7uSqbg3y3aDEh5q4ba5W0tI=";
   };
 
   build-system = [
diff --git a/pkgs/os-specific/linux/kernel/xanmod-kernels.nix b/pkgs/os-specific/linux/kernel/xanmod-kernels.nix
index 5b5628d19405..c64a7ce1fd44 100644
--- a/pkgs/os-specific/linux/kernel/xanmod-kernels.nix
+++ b/pkgs/os-specific/linux/kernel/xanmod-kernels.nix
@@ -15,14 +15,14 @@ let
   variants = {
     # ./update-xanmod.sh lts
     lts = {
-      version = "6.18.41";
-      hash = "sha256-nGDN+qkTNaUVgV+aFOvEtwkDaK7uqpjvXgENpkviDFg=";
+      version = "6.18.42";
+      hash = "sha256-yDtXLGdFM4rg8mtxUJbUvCvjs2dvFiSGuCV7seKlWqM=";
       isLTS = true;
     };
     # ./update-xanmod.sh main
     main = {
-      version = "7.1.5";
-      hash = "sha256-zELqn/UieXjOBkTNTLi2OCkK4+rpD/IfJEDb7GTTJfk=";
+      version = "7.1.6";
+      hash = "sha256-H+dNmTMCWfJm792HR6lz1wVUD70pyZpn5HlTUXwsnLI=";
     };
   };
 
diff --git a/pkgs/os-specific/linux/lkrg/default.nix b/pkgs/os-specific/linux/lkrg/default.nix
index 734a8cef3f7f..d4f6ca01c4c8 100644
--- a/pkgs/os-specific/linux/lkrg/default.nix
+++ b/pkgs/os-specific/linux/lkrg/default.nix
@@ -13,13 +13,13 @@ in
 stdenv.mkDerivation (finalAttrs: {
   name = "${finalAttrs.pname}-${finalAttrs.version}-${kernel.version}";
   pname = "lkrg";
-  version = "1.0.0";
+  version = "1.0.1";
 
   src = fetchFromGitHub {
     owner = "lkrg-org";
     repo = "lkrg";
     rev = "v${finalAttrs.version}";
-    hash = "sha256-Eb0+rgbI+gbY1NjVyPLB6kZgDsYoSCxjy162GophiMI=";
+    hash = "sha256-j/0iK/I+pj69Z39lZJFaCQ3WxzZL6663Kxy4Sf46tOo=";
   };
 
   hardeningDisable = [ "pic" ];
diff --git a/pkgs/pkgs-lib/formats.nix b/pkgs/pkgs-lib/formats.nix
index e5f941af3770..a38b92f9444f 100644
--- a/pkgs/pkgs-lib/formats.nix
+++ b/pkgs/pkgs-lib/formats.nix
@@ -167,16 +167,16 @@ optionalAttrs allowAliases aliases
       generate =
         name: value:
         pkgs.callPackage (
-          { runCommand, remarshal_0_17 }:
+          { runCommand, remarshal }:
           runCommand name
             {
-              nativeBuildInputs = [ remarshal_0_17 ];
+              nativeBuildInputs = [ remarshal ];
               inherit value;
               preferLocalBuild = true;
               __structuredAttrs = true;
             }
             ''
-              json2yaml ${
+              remarshal --from json --to yaml-1.1 ${
                 # attributes with null values are omitted from the JSON with structured attrs
                 # yaml_1_1Null test keeps this in check
                 if value == null then ''<(echo "null")'' else ''--unwrap value "$NIX_ATTRS_JSON_FILE"''
diff --git a/pkgs/pkgs-lib/tests/formats.nix b/pkgs/pkgs-lib/tests/formats.nix
index b03b44c99150..56ce50ed6953 100644
--- a/pkgs/pkgs-lib/tests/formats.nix
+++ b/pkgs/pkgs-lib/tests/formats.nix
@@ -168,6 +168,8 @@ runBuildTests {
       time = "22:30:00";
     };
     expected = ''
+      %YAML 1.1
+      ---
       attrs:
         foo: null
       'false': false
@@ -188,8 +190,9 @@ runBuildTests {
     format = formats.yaml_1_1 { };
     input = null;
     expected = ''
-      null
-      ...
+      %YAML 1.1
+      ---
+        null
     '';
   };
 
diff --git a/pkgs/servers/http/nginx/modules/echo/package.nix b/pkgs/servers/http/nginx/modules/echo/package.nix
index ea4a748cc50f..03c215d76990 100644
--- a/pkgs/servers/http/nginx/modules/echo/package.nix
+++ b/pkgs/servers/http/nginx/modules/echo/package.nix
@@ -6,14 +6,14 @@
 
 mkNginxPlugin (finalAttrs: {
   pname = "echo";
-  version = "0.63";
+  version = "0.65";
 
   src = fetchFromGitHub {
     name = "echo";
     owner = "openresty";
     repo = "echo-nginx-module";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-K7oOE0yxPYLf+3YMVbBsncpHRpGHXjs/8B5QPO3MQC4=";
+    hash = "sha256-DiukXNS1ZoKVMnDD/65DZxxQSS/lAKZ5b0Pp0Hs6MTc=";
   };
 
   meta = {
diff --git a/pkgs/servers/http/nginx/modules/lua/package.nix b/pkgs/servers/http/nginx/modules/lua/package.nix
index 58c3094376ad..f8f45586e4ab 100644
--- a/pkgs/servers/http/nginx/modules/lua/package.nix
+++ b/pkgs/servers/http/nginx/modules/lua/package.nix
@@ -7,13 +7,13 @@
 
 mkNginxPlugin (finalAttrs: {
   pname = "lua";
-  version = "0.10.29";
+  version = "0.10.31";
 
   src = fetchFromGitHub {
     owner = "openresty";
     repo = "lua-nginx-module";
     rev = "v${finalAttrs.version}";
-    hash = "sha256-z62Vwrthl1FJiTdrdhifZZe6crdi8c6sTkUim6KmVlU=";
+    hash = "sha256-pS3Ce8duBtD1qb/E3NNnkuNU/39D4S9dJlGIfd9hkkc=";
   };
 
   buildInputs = [ luajit_openresty ];
diff --git a/pkgs/servers/http/nginx/modules/modsecurity/package.nix b/pkgs/servers/http/nginx/modules/modsecurity/package.nix
index 43b18cb900a4..ec3cd5fa0d3c 100644
--- a/pkgs/servers/http/nginx/modules/modsecurity/package.nix
+++ b/pkgs/servers/http/nginx/modules/modsecurity/package.nix
@@ -12,13 +12,13 @@
 
 mkNginxPlugin (finalAttrs: {
   pname = "modsecurity";
-  version = "1.0.3-unstable-2025-02-17";
+  version = "1.0.4";
 
   src = fetchFromGitHub {
     owner = "owasp-modsecurity";
     repo = "ModSecurity-nginx";
-    rev = "0b4f0cf38502f34a30c8543039f345cfc075670d";
-    hash = "sha256-P3IwKFR4NbaMXYY+O9OHfZWzka4M/wr8sJpX94LzQTU=";
+    tag = "v${finalAttrs.version}";
+    hash = "sha256-pOHn4lHISqRspbRxtB4XpbEydeKVlXpvEVHzSbuLp/s=";
   };
 
   buildInputs = [
@@ -32,7 +32,7 @@ mkNginxPlugin (finalAttrs: {
 
   meta = {
     description = "Open source, cross platform web application firewall (WAF)";
-    homepage = "https://github.com/owasp-modsecurity/ModSecurity";
+    homepage = "https://github.com/owasp-modsecurity/ModSecurity-nginx";
     license = lib.licenses.asl20;
     maintainers = [ ];
   };
diff --git a/pkgs/servers/http/nginx/modules/moreheaders/package.nix b/pkgs/servers/http/nginx/modules/moreheaders/package.nix
index 051206ac8db2..e47efb7decde 100644
--- a/pkgs/servers/http/nginx/modules/moreheaders/package.nix
+++ b/pkgs/servers/http/nginx/modules/moreheaders/package.nix
@@ -6,13 +6,13 @@
 
 mkNginxPlugin (finalAttrs: {
   pname = "moreheaders";
-  version = "0.36";
+  version = "0.40";
 
   src = fetchFromGitHub {
     owner = "openresty";
     repo = "headers-more-nginx-module";
     tag = "v${finalAttrs.version}";
-    sha256 = "sha256-X+ygIesQ9PGm5yM+u1BOLYVpm1172P8jWwXNr3ixFY4=";
+    sha256 = "sha256-4oddjLXtJyDmxCa2ocBtNAeKWXxI38I9eHeFVw9/ANc=";
   };
 
   meta = {
diff --git a/pkgs/servers/http/nginx/modules/pam/package.nix b/pkgs/servers/http/nginx/modules/pam/package.nix
index bb2bb00331b8..4c9166dd40a0 100644
--- a/pkgs/servers/http/nginx/modules/pam/package.nix
+++ b/pkgs/servers/http/nginx/modules/pam/package.nix
@@ -7,13 +7,13 @@
 
 mkNginxPlugin (finalAttrs: {
   pname = "pam";
-  version = "1.5.3";
+  version = "1.5.5";
 
   src = fetchFromGitHub {
     owner = "sto";
     repo = "ngx_http_auth_pam_module";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-Kojk0/zxAktpZ/8YvCglVlN0xi+jELYGMcU8CZukliY=";
+    hash = "sha256-ESlrWZwpLE0bVS1MwTc2Zcu7892HsaCQ7APGsmdbIuU=";
   };
 
   buildInputs = [ pam ];
diff --git a/pkgs/servers/http/nginx/modules/set-misc/package.nix b/pkgs/servers/http/nginx/modules/set-misc/package.nix
index 0f299ad65240..2fb1c10c2d41 100644
--- a/pkgs/servers/http/nginx/modules/set-misc/package.nix
+++ b/pkgs/servers/http/nginx/modules/set-misc/package.nix
@@ -8,13 +8,13 @@
 
 mkNginxPlugin (finalAttrs: {
   pname = "set-misc";
-  version = "0.33";
+  version = "0.34";
 
   src = fetchFromGitHub {
     owner = "openresty";
     repo = "set-misc-nginx-module";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-jMMj3Ki1uSfQzagoB/O4NarxPjiaF9YRwjSKo+cgMxo=";
+    hash = "sha256-2QHidYeKCELkWAdXwmMq9DsirK7I06gbsUVz6uJy+CI=";
   };
 
   passthru.tests.nginx = nginx.override {
diff --git a/pkgs/servers/http/nginx/modules/upstream-check/package.nix b/pkgs/servers/http/nginx/modules/upstream-check/package.nix
index b91fd1190405..780238a06496 100644
--- a/pkgs/servers/http/nginx/modules/upstream-check/package.nix
+++ b/pkgs/servers/http/nginx/modules/upstream-check/package.nix
@@ -6,13 +6,13 @@
 
 mkNginxPlugin (finalAttrs: {
   pname = "upstream-check";
-  version = "0.3.0-unstable-2019-11-03";
+  version = "0.4.0";
 
   src = fetchFromGitHub {
     owner = "yaoweibin";
     repo = "nginx_upstream_check_module";
-    rev = "e538034b6ad7992080d2403d6d3da56e4f7ac01e";
-    hash = "sha256-lJzVs+B/1VjGiQeDyl0md/6o1AYVgeWxx7+LAwiYxxs=";
+    tag = "v${finalAttrs.version}";
+    hash = "sha256-UttWL83yG/QbMstfQwv2cK7mJTzR4G5rv7cktPpC6sI=";
   };
 
   meta = {
diff --git a/pkgs/servers/sql/postgresql/ext/pg_rational.nix b/pkgs/servers/sql/postgresql/ext/pg_rational.nix
index db3fdd340ac9..6092b2ea98ee 100644
--- a/pkgs/servers/sql/postgresql/ext/pg_rational.nix
+++ b/pkgs/servers/sql/postgresql/ext/pg_rational.nix
@@ -7,13 +7,13 @@
 
 postgresqlBuildExtension (finalAttrs: {
   pname = "pg_rational";
-  version = "0.0.2";
+  version = "0.0.3";
 
   src = fetchFromGitHub {
     owner = "begriffs";
     repo = "pg_rational";
     tag = "v${finalAttrs.version}";
-    hash = "sha256-Sp5wuX2nP3KGyWw7MFa11rI1CPIKIWBt8nvBSsASIEw=";
+    hash = "sha256-8ctA1XkBOMyO0V9sy2ll6q89jLa7aG5xW9rtr3ugoeA=";
   };
 
   meta = {
diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix
index 73efb15c4bc4..8f4da2320b2d 100644
--- a/pkgs/top-level/aliases.nix
+++ b/pkgs/top-level/aliases.nix
@@ -2084,6 +2084,7 @@ mapAliases {
   redpanda = throw "'redpanda' has been renamed to/replaced by 'redpanda-client'"; # Converted to throw 2025-10-27
   redshift-plasma-applet = throw "'redshift-plasma-applet' has been removed as it is obsolete and lacks maintenance upstream."; # Added 2025-11-09
   reiserfsprogs = throw "'reiserfsprogs' has been removed as ReiserFS has not been actively maintained for many years."; # Added 2025-11-13
+  remarshal_0_17 = throw "'remarshal_0_17' has been removed because 'remarshal' supports YAML 1.1 with the `--to yaml-1.1` flag."; # added 2026-07-30
   remodel = throw "'remodel' has been removed because it was unmaintained upstream, deprecated in favor of 'lune'"; # Added 2026-05-08
   remotebox = throw "remotebox has been removed because it was unmaintained and broken for a long time"; # Added 2025-09-11
   resp-app = throw "'resp-app' has been replaced by 'redisinsight'"; # Added 2025-12-17
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index d70e57ff7a9e..1c7a15a11e6e 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -2932,6 +2932,8 @@ self: super: with self; {
 
   cdxj-indexer = callPackage ../development/python-modules/cdxj-indexer { };
 
+  cel-python = callPackage ../development/python-modules/cel-python { };
+
   celery = callPackage ../development/python-modules/celery { };
 
   celery-batches = callPackage ../development/python-modules/celery-batches { };
@@ -3281,6 +3283,8 @@ self: super: with self; {
 
   cmake-build-extension = callPackage ../development/python-modules/cmake-build-extension { };
 
+  cmake-parser = callPackage ../development/python-modules/cmake-parser { };
+
   cmarkgfm = callPackage ../development/python-modules/cmarkgfm { };
 
   cmd2 = callPackage ../development/python-modules/cmd2 { };
@@ -3677,6 +3681,10 @@ self: super: with self; {
 
   crewai = callPackage ../development/python-modules/crewai { };
 
+  crewai-cli = callPackage ../development/python-modules/crewai-cli { };
+
+  crewai-core = callPackage ../development/python-modules/crewai-core { };
+
   crispy-bootstrap3 = callPackage ../development/python-modules/crispy-bootstrap3 { };
 
   crispy-bootstrap4 = callPackage ../development/python-modules/crispy-bootstrap4 { };
@@ -5339,9 +5347,7 @@ self: super: with self; {
 
   eheimdigital = callPackage ../development/python-modules/eheimdigital { };
 
-  eigenpy = callPackage ../development/python-modules/eigenpy {
-    inherit (pkgs) graphviz; # need the `dot` program, not the python module
-  };
+  eigenpy = callPackage ../development/python-modules/eigenpy { };
 
   einops = callPackage ../development/python-modules/einops { };
 
diff --git a/pkgs/top-level/release-python.nix b/pkgs/top-level/release-python.nix
index 47b2133368b3..51407db2654f 100644
--- a/pkgs/top-level/release-python.nix
+++ b/pkgs/top-level/release-python.nix
@@ -54,7 +54,7 @@ let
       meta.description = "Release-critical packages from the python package sets";
       constituents = [
         jobs.nixos-render-docs.x86_64-linux # Used in nixos manual
-        jobs.remarshal_0_17.x86_64-linux # Used in pkgs.formats.yaml_1_1
+        jobs.remarshal.x86_64-linux # Used in pkgs.formats.yaml_1_1
         jobs.python313Packages.afdko.x86_64-linux # Used in noto-fonts-color-emoji
         jobs.python313Packages.buildcatrust.x86_64-linux # Used in pkgs.cacert
         jobs.python313Packages.colorama.x86_64-linux # Used in nixos test-driver