Merge pull request #111646 from SuperSandro2000/fix-collection7

pkgs/development/python-modules/apache-airflow/default.nix

@@ -143,11 +143,9 @@ buildPythonPackage rec {
       --replace "flask-appbuilder>=1.12.5, <2.0.0" "flask-appbuilder" \
       --replace "flask-admin==1.5.3" "flask-admin" \
       --replace "flask-login>=0.3, <0.5" "flask-login" \
-      --replace "pendulum==1.4.4" "pendulum" \
       --replace "cached_property~=1.5" "cached_property" \
       --replace "dill>=0.2.2, <0.3" "dill" \
       --replace "configparser>=3.5.0, <3.6.0" "configparser" \
-      --replace "jinja2>=2.10.1, <2.11.0" "jinja2" \
       --replace "colorlog==4.0.2" "colorlog" \
       --replace "funcsigs==1.0.0" "funcsigs" \
       --replace "flask-swagger==0.2.13" "flask-swagger" \

pkgs/development/python-modules/deform/default.nix

@@ -11,11 +11,6 @@ buildPythonPackage rec {
     sha256 = "1e912937650c1dbb830079dd9c039950762a230223a567740fbf1b23f1090367";
   };
 
-  postPatch = ''
-    substituteInPlace setup.py \
-      --replace "iso8601<=0.1.11" iso8601
-  '';
-
   propagatedBuildInputs = [
     chameleon
     colander

pkgs/development/python-modules/doit/default.nix

@@ -25,6 +25,9 @@ buildPythonPackage rec {
     ++ lib.optional stdenv.isLinux pyinotify
     ++ lib.optional stdenv.isDarwin macfsevents;
 
+  # hangs on darwin
+  doCheck = !stdenv.isDarwin;
+
   checkInputs = [ mock pytestCheckHook ];
 
   disabledTests = [

pkgs/development/python-modules/dufte/default.nix

@@ -6,6 +6,7 @@
 , importlib-metadata
 , matplotlib
 , numpy
+, exdown
 , pytestCheckHook
 }:
 
@@ -32,12 +33,9 @@ buildPythonPackage rec {
     mkdir -p $HOME/.matplotlib
     echo "backend: ps" > $HOME/.matplotlib/matplotlibrc
   '';
-  checkInputs = [ pytestCheckHook ];
+
+  checkInputs = [ exdown pytestCheckHook ];
   pythonImportsCheck = [ "dufte" ];
-  pytestFlagsArray = [
-    # we don't have the "exdown" package (yet)
-    "--ignore=test/test_readme.py"
-  ];
 
   meta = with lib; {
     description = "Clean matplotlib plots";

pkgs/development/python-modules/exdown/default.nix

@@ -0,0 +1,24 @@
+{ lib, buildPythonPackage, fetchPypi, pythonOlder
+, importlib-metadata }:
+
+buildPythonPackage rec {
+  pname = "exdown";
+  version = "0.7.1";
+  format = "pyproject";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "sha256-vnSso3vmPIjX7JX+NwoxguwqwPHocJACeh5H0ClPcUI=";
+  };
+
+  propagatedBuildInputs = lib.optionals (pythonOlder "3.8") [ importlib-metadata ];
+
+  pythonImportsCheck = [ "exdown" ];
+
+  meta = with lib; {
+    description = "Extract code blocks from markdown";
+    homepage = "https://github.com/nschloe/exdown";
+    license = licenses.mit;
+    maintainers = with maintainers; [ SuperSandro2000 ];
+  };
+}

pkgs/development/python-modules/git-sweep/default.nix

@@ -15,6 +15,11 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [ GitPython ];
 
+  # no tests
+  doCheck = false;
+
+  pythonImportsCheck = [ "gitsweep" ];
+
   meta = with lib; {
     description = "A command-line tool that helps you clean up Git branches";
     homepage = "https://github.com/arc90/git-sweep";

pkgs/development/python-modules/nbdime/default.nix

@@ -12,7 +12,7 @@
 , tabulate
 , nbformat
 , jsonschema
-, pytest
+, pytestCheckHook
 , colorama
 , pygments
 , tornado
@@ -40,7 +40,16 @@ buildPythonPackage rec {
     jsonschema
     mock
     tabulate
-    pytest
+    pytestCheckHook
+  ];
+
+  disabledTests = [
+    "test_apply_filter_no_repo"
+    "test_diff_api_checkpoint"
+    "test_filter_cmd_invalid_filter"
+    "test_inline_merge"
+    "test_interrogate_filter_no_repo"
+    "test_merge_input_strategy_inline_source_conflict"
   ];
 
   nativeBuildInputs = [ setuptools_scm ];

pkgs/development/python-modules/pyslurm/default.nix

@@ -22,6 +22,7 @@ buildPythonPackage rec {
     description = "Python bindings to Slurm";
     license = licenses.gpl2;
     maintainers = with maintainers; [ bhipple ];
+    platforms = platforms.linux;
     broken = true;  # still needs slurm-19.05, but nixpkgs has slurm-20+ now
   };
 }

pkgs/development/python-modules/skein/skeinrepo.nix

@@ -7,8 +7,6 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [ maven ] ++ lib.optional stdenv.isLinux autoPatchelfHook;
 
-  doBuild = false;
-
   installPhase = ''
     mkdir -p $out
 

pkgs/development/python-modules/somajo/default.nix

@@ -1,4 +1,4 @@
-{ pkgs, lib, fetchFromGitHub, buildPythonPackage, isPy3k, regex }:
+{ lib, stdenv, fetchFromGitHub, buildPythonPackage, isPy3k, regex }:
 
 buildPythonPackage rec {
   pname = "SoMaJo";
@@ -14,6 +14,9 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [ regex ];
 
+  # loops forever
+  doCheck = !stdenv.isDarwin;
+
   meta = with lib; {
     description = "Tokenizer and sentence splitter for German and English web texts";
     homepage = "https://github.com/tsproisl/SoMaJo";