Replace the local `missing-new-line-test.patch` with two upstream commits:
- 4b9160b: fixes `--TEST--n` typos in 7 test files that caused the PHP
test runner to report them as BORKED
- 6eda368: fixes clearsign test expectations to accept both with and
without trailing newline, handling FreePG-patched GnuPG
https://github.com/php-gnupg/php-gnupg/issues/62
checkInputs used to be added to nativeBuildInputs. Now we have
nativeCheckInputs to do that instead. Doing this treewide change allows
to keep hashes identical to before the introduction of
nativeCheckInputs.
