Commit Graph

1535 Commits

Author SHA1 Message Date
László Kupcsik
5b11e74a01 rPackages.multiMiR: fix loading test error 2024-04-07 22:51:42 +02:00
László Kupcsik
611a654544 rPackages.scPipe: fix build 2024-04-07 00:58:30 +02:00
László Kupcsik
de2b0339b3 rPackages.Rfastp: fix build 2024-04-07 00:43:12 +02:00
László Kupcsik
00161565e2 rPackages.deepSNV: fix build 2024-04-07 00:22:12 +02:00
László Kupcsik
49b8ddad05 rPackages.signatureSearch: disable package
ExperimentHub dependent
2024-04-06 23:49:53 +02:00
László Kupcsik
58b3ea45ae rPackages.hpar: mark as broken
Requires ExperimentHub
2024-04-06 23:48:38 +02:00
László Kupcsik
da66198664 rPackages.ChemmineOB: fix build 2024-04-06 23:26:15 +02:00
László Kupcsik
e659299d1c rPackages.eds: fix build 2024-04-06 22:57:32 +02:00
László Kupcsik
73142ffe16 rPackages.diffHic: add deps 2024-04-06 22:54:27 +02:00
László Kupcsik
ce6a887ed2 rPackages.SpatialDecon: fix build 2024-04-06 22:45:35 +02:00
Justin Bedő
375e28ef0a Merge pull request #298837 from NixOS/r-updates
rPackages: tree bump and package fixes
2024-04-05 13:22:50 +11:00
Andrew Marshall
07835aab84 rPackages.ragg: fix build on darwin
Without this, x86_64-darwin build fails with:

> ld: library not found for -lLerc

Seems not needed on x86_64-linux, as that succeeds.
2024-04-03 21:17:22 -04:00
Justin Bedő
32bb233874 Merge pull request #299931 from b-rodrigues/fix_rpackages.gdalcubes
rPackages.gdalcubes: fixed build
2024-04-02 09:35:19 +11:00
Justin Bedő
76d9c81e01 Merge pull request #299934 from b-rodrigues/fix_rpackages.unigd
rPackages.unigd: fixed build
2024-04-02 09:27:16 +11:00
Justin Bedő
26284122d9 Merge pull request #300763 from b-rodrigues/fix_ngchm
rPackages.NGCHM: fixed build
2024-04-02 09:20:52 +11:00
Justin Bedő
643aed5cf5 Merge pull request #300204 from b-rodrigues/fix_iemisc
rPackages.iemisc: fixed build
2024-04-02 09:19:20 +11:00
Justin Bedő
7d2b7b2155 Merge pull request #299981 from b-rodrigues/fix_rswipl
rPackages.rswipl: fixed build
2024-04-02 09:02:24 +11:00
Justin Bedő
ecab842d55 Merge pull request #300205 from b-rodrigues/fix_jackalope
rPackages.jackalope: fixed build
2024-04-02 08:37:28 +11:00
Bruno Rodrigues
ee6b13f48d rPackages.NGCHM: fixed build 2024-04-01 20:58:30 +02:00
Justin Bedő
3064781afd Merge pull request #300208 from b-rodrigues/fix_spectralgraphtopology
rPackages.spectralGraphTopology: fixed build
2024-04-01 22:37:08 +11:00
Justin Bedő
8371418808 Merge pull request #300557 from Kupac/fix_universalmotif
rPackages.universalmotif: fix build
2024-04-01 22:26:51 +11:00
Justin Bedő
d404edc2c6 Merge pull request #299975 from b-rodrigues/fix_rmsb
rPackages.rmsb: fixed build
2024-04-01 22:25:44 +11:00
Weijia Wang
2389f916ae Merge pull request #300549 from Kupac/fix_QuasR
rPackages.QuasR: add deps
2024-03-31 23:41:41 +02:00
László Kupcsik
03612d86ad rPackages.universalmotif: fix build
No need to try to strip debug symbols, Nix will do it anyway
2024-03-31 23:36:55 +02:00
Weijia Wang
be29ba421a Merge pull request #300544 from Kupac/fix_csaw
rPackages.csaw: fix deps
2024-03-31 23:36:35 +02:00
Justin Bedő
2f472ba030 Merge pull request #300541 from b-rodrigues/fix_diffbind
rPackages.DiffBind: fixed build
2024-04-01 08:34:42 +11:00
Justin Bedő
ffac91dfce Merge pull request #300543 from Kupac/fix_methylinheritance
rPackages.methylKit: fix deps
2024-04-01 08:30:14 +11:00
László Kupcsik
55b7361297 rPackages.QuasR: add deps 2024-03-31 22:55:36 +02:00
László Kupcsik
8b44bfc3d2 rPackages.csaw: fix deps 2024-03-31 22:29:32 +02:00
László Kupcsik
87238b00ed rPackages.methylKit: fix deps 2024-03-31 22:26:14 +02:00
Bruno Rodrigues
332a114609 rPackages.DiffBind: fixed build 2024-03-31 22:14:26 +02:00
László Kupcsik
9b794cf973 rPackages.exifr: set tool paths
Update pkgs/development/r-modules/default.nix

Co-authored-by: Justin Bedő <cu@cua0.org>
2024-03-30 23:58:56 +01:00
László Kupcsik
4896b1d57f rPackages.RQuantLib: fix build error
Upgrade library

Co-authored-by: Justin Bedő <cu@cua0.org>
2024-03-30 23:31:27 +01:00
Bruno Rodrigues
b8cbb8bc47 rPackages.spectralGraphTopology: fixed build 2024-03-30 12:08:00 +01:00
Bruno Rodrigues
330e781d09 rPackages.jackalope: fix build 2024-03-30 12:00:33 +01:00
Bruno Rodrigues
08cf03a45a rPackages.iemisc: fixed build 2024-03-30 11:42:11 +01:00
Bruno Rodrigues
f436ae5115 rPackages.gdalcubes: fixed build 2024-03-30 10:52:25 +01:00
Bruno Rodrigues
dd1bc4940b rPackages.unigd: fixed build 2024-03-30 10:48:22 +01:00
Bruno Rodrigues
2e5c506c69 rPackages.rswipl: fixed build 2024-03-30 10:40:47 +01:00
Justin Bedő
3f13bc4fef Merge pull request #300091 from Kupac/fix-KSgeneral
rPackages.KSgeneral: add missing deps
2024-03-30 09:09:36 +11:00
Justin Bedő
4f4b73649d Merge pull request #299953 from b-rodrigues/fix_rpackages.string2path
rPackages.string2path: fixed build
2024-03-30 08:49:46 +11:00
Justin Bedő
1bd5f9c9ee Merge pull request #299826 from b-rodrigues/fix_rpackages.pexm
rPackages.pexm: fixed build
2024-03-30 08:42:25 +11:00
Justin Bedő
b024278f3f Merge pull request #299825 from b-rodrigues/fix_rpackages.connections
rPackages.connections: fixed build
2024-03-30 08:40:31 +11:00
László Kupcsik
25e44c0d19 rPackages.KSgeneral: add missing deps 2024-03-29 22:29:05 +01:00
László Kupcsik
3e1c1ccfc8 rPackages.pkgdepends: fix compile error
Locate patchShebangs correctly

Co-authored-by: Justin Bedő <cu@cua0.org>
2024-03-29 21:44:09 +01:00
Bruno Rodrigues
f650c2c078 rPackages.rmsb: fixed build 2024-03-29 12:44:08 +01:00
Bruno Rodrigues
584544efc9 rPackages.string2path: fixed build 2024-03-29 10:38:28 +01:00
Justin Bedő
bda9e420d9 Merge pull request #299827 from b-rodrigues/fix_rpackages.cartogramR
rPackages.cartogramR: fixed build
2024-03-29 15:02:46 +11:00
Justin Bedő
468583ced4 Merge pull request #299831 from b-rodrigues/fix_rpackages.textlinedetector
rPackages.image_textlinedetector: fixed build
2024-03-29 14:49:37 +11:00
Justin Bedo
284dde6755 rPackages.hdf5r: fix build 2024-03-29 14:41:01 +11:00