mirror of
https://github.com/NixOS/nixpkgs.git
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88 lines
1.6 KiB
Nix
88 lines
1.6 KiB
Nix
{
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lib,
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buildPythonPackage,
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fetchFromGitHub,
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# build-system
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hatch-vcs,
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hatchling,
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# dependencies
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joblib,
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nibabel,
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numpy,
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pandas,
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requests,
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scikit-learn,
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jinja2,
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scipy,
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packaging,
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pytestCheckHook,
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pytest-timeout,
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pytest-rerunfailures,
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numpydoc,
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polars,
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}:
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buildPythonPackage (finalAttrs: {
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pname = "nilearn";
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version = "0.14.1";
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pyproject = true;
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__structuredAttrs = true;
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src = fetchFromGitHub {
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owner = "nilearn";
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repo = "nilearn";
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tag = finalAttrs.version;
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hash = "sha256-z/U2ZfAuyFYhkSCv0X2ZRqUPFt8HM4X8NBntELccBO4=";
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};
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postPatch = ''
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substituteInPlace pyproject.toml \
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--replace-fail " --template=maint_tools/templates/index.html" ""
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'';
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build-system = [
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hatchling
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hatch-vcs
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];
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# nilearn excludes scikit-learn 1.9.0 due to a sluggish HTML repr bug,
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# which is fixed by the patch applied to python3Packages.scikit-learn.
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pythonRelaxDeps = [
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"scikit-learn"
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];
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dependencies = [
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joblib
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nibabel
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numpy
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pandas
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requests
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scikit-learn
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jinja2
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scipy
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packaging
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];
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nativeCheckInputs = [
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pytestCheckHook
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pytest-timeout
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pytest-rerunfailures
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numpydoc
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polars
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];
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# do subset of tests which don't fetch resources
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enabledTestPaths = [ "nilearn/connectome/tests" ];
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meta = {
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description = "Module for statistical learning on neuroimaging data";
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homepage = "https://nilearn.github.io";
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changelog = "https://github.com/nilearn/nilearn/releases/tag/${finalAttrs.src.tag}";
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license = lib.licenses.bsd3;
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maintainers = with lib.maintainers; [ GaetanLepage ];
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};
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})
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