mirror of
https://github.com/NixOS/nixpkgs.git
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106 lines
2.0 KiB
Nix
106 lines
2.0 KiB
Nix
{
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lib,
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stdenv,
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buildPythonPackage,
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fetchFromGitHub,
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# build-system
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setuptools,
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setuptools-scm,
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# dependencies
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jax,
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jaxlib,
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numpy,
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optax,
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scipy,
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typing-extensions,
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# optional-dependencies
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fastprogress,
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# checks
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chex,
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pytest-xdist,
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pytestCheckHook,
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}:
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buildPythonPackage (finalAttrs: {
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pname = "blackjax";
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version = "1.5";
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pyproject = true;
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src = fetchFromGitHub {
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owner = "blackjax-devs";
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repo = "blackjax";
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tag = finalAttrs.version;
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hash = "sha256-tKJfukTqSiW2Xg3/8DakxtxlwGpJ14S/7qUE1OGM97I=";
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};
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build-system = [
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setuptools
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setuptools-scm
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];
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dependencies = [
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jax
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jaxlib
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numpy
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optax
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scipy
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typing-extensions
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];
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optional-dependencies = {
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progress = [
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fastprogress
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];
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};
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nativeCheckInputs = [
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chex
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pytestCheckHook
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pytest-xdist
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]
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++ finalAttrs.passthru.optional-dependencies.progress;
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disabledTestPaths = [
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"tests/test_benchmarks.py"
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# Assertion errors on numerical values
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"tests/mcmc/test_integrators.py"
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];
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disabledTests = [
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# too slow
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"test_adaptive_tempered_smc"
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# AssertionError on numerical values
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"test_barker"
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"test_mclmc"
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"test_mcse4"
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"test_mean_and_std"
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"test_normal_univariate"
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"test_nuts__with_device"
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"test_nuts__with_jit"
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"test_nuts__without_device"
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"test_nuts__without_jit"
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"test_smc__with_jit"
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"test_smc_waste_free__with_jit"
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]
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++ lib.optionals (stdenv.hostPlatform.isLinux && stdenv.hostPlatform.isAarch64) [
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# AssertionError: Not equal to tolerance rtol=1e-07, atol=1e-05
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"test_equal_matrices"
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];
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pythonImportsCheck = [ "blackjax" ];
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meta = {
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homepage = "https://blackjax-devs.github.io/blackjax";
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description = "Sampling library designed for ease of use, speed and modularity";
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changelog = "https://github.com/blackjax-devs/blackjax/releases/tag/${finalAttrs.src.tag}";
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license = lib.licenses.asl20;
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maintainers = with lib.maintainers; [ bcdarwin ];
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};
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})
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