mirror of
https://github.com/NixOS/nixpkgs.git
synced 2026-06-10 07:13:38 +00:00
75 lines
1.5 KiB
Nix
75 lines
1.5 KiB
Nix
{
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lib,
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buildPythonPackage,
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dask-image,
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dask,
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fetchFromGitHub,
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fsspec,
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hatch-vcs,
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hatchling,
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ngff-zarr,
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numpy,
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python-dateutil,
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spatial-image,
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writableTmpDirAsHomeHook,
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xarray-dataclass,
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xarray,
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zarr,
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}:
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buildPythonPackage (finalAttrs: {
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pname = "multiscale-spatial-image";
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version = "2.1.0";
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pyproject = true;
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src = fetchFromGitHub {
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owner = "spatial-image";
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repo = "multiscale-spatial-image";
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tag = "v${finalAttrs.version}";
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hash = "sha256-uF9ZccLvP1ref6qn3l6EpedsoK29Q8lAdr68JjsYMis=";
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};
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pythonRelaxDeps = [
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"dask"
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"ngff-zarr"
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"xarray"
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];
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build-system = [
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hatch-vcs
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hatchling
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];
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dependencies = [
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dask
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ngff-zarr
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numpy
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python-dateutil
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spatial-image
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xarray
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xarray-dataclass
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zarr
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];
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optional-dependencies = {
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dask-image = [ dask-image ];
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#itk = [
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# itk-filtering # not in nixpkgs yet
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#];
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};
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nativeBuildInputs = [ writableTmpDirAsHomeHook ];
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doCheck = false; # all test files try to download data
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pythonImportsCheck = [ "multiscale_spatial_image" ];
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meta = {
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description = "Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF";
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homepage = "https://github.com/spatial-image/multiscale-spatial-image";
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changelog = "https://github.com/spatial-image/multiscale-spatial-image/releases/tag/${finalAttrs.src.tag}";
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license = lib.licenses.asl20;
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maintainers = with lib.maintainers; [ bcdarwin ];
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};
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})
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