mirror of
https://github.com/NixOS/nixpkgs.git
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68e9fca909
Diff: https://github.com/pymc-devs/nutpie/compare/v0.16.9...v0.16.10 Changelog: https://github.com/pymc-devs/nutpie/blob/v0.16.10/CHANGELOG.md
107 lines
1.9 KiB
Nix
107 lines
1.9 KiB
Nix
{
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lib,
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stdenv,
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buildPythonPackage,
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fetchFromGitHub,
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rustPlatform,
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# build-system
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cargo,
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rustc,
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# dependencies
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arro3-core,
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arviz,
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obstore,
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pandas,
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platformdirs,
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pyarrow,
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xarray,
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zarr,
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# tests
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# bridgestan, (not packaged)
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equinox,
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flowjax,
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jax,
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jaxlib,
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numba,
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pytest-timeout,
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pymc,
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pytestCheckHook,
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setuptools,
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writableTmpDirAsHomeHook,
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}:
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buildPythonPackage (finalAttrs: {
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pname = "nutpie";
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version = "0.16.10";
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pyproject = true;
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__structuredAttrs = true;
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src = fetchFromGitHub {
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owner = "pymc-devs";
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repo = "nutpie";
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tag = "v${finalAttrs.version}";
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hash = "sha256-Cqi4vhvu6Gvy0gOcgrpKCHbuVIyY5L9+y5nafzksPwg=";
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};
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cargoDeps = rustPlatform.fetchCargoVendor {
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inherit (finalAttrs) pname version src;
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hash = "sha256-cJixyzzt2vwdT2B/XbOLbG6XfWVeYAJg5YWT18GqMDw=";
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};
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build-system = [
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cargo
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rustPlatform.bindgenHook
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rustPlatform.cargoSetupHook
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rustPlatform.maturinBuildHook
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rustc
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];
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dependencies = [
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arro3-core
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arviz
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obstore
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pandas
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pyarrow
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xarray
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zarr
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];
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pythonImportsCheck = [ "nutpie" ];
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nativeCheckInputs = [
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# bridgestan
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equinox
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flowjax
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numba
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jax
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jaxlib
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platformdirs
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pymc
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pytest-timeout
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pytestCheckHook
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setuptools
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writableTmpDirAsHomeHook
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];
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disabledTests = lib.optionals (stdenv.hostPlatform.isLinux && stdenv.hostPlatform.isAarch64) [
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# flaky (assert np.float64(0.0017554642626285276) > 0.01)
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"test_normalizing_flow"
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];
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disabledTestPaths = [
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# Require unpackaged bridgestan
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"tests/test_stan.py"
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];
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meta = {
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description = "Python wrapper for nuts-rs";
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homepage = "https://github.com/pymc-devs/nutpie";
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changelog = "https://github.com/pymc-devs/nutpie/blob/${finalAttrs.src.tag}/CHANGELOG.md";
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license = lib.licenses.mit;
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maintainers = with lib.maintainers; [ GaetanLepage ];
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};
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})
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