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rPackages: fix dependencies of broken packages

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This commit is contained in:
TomaSajt
2026-07-16 00:38:42 +02:00
committed by Michael Daniels
parent a9f2906aa2
commit dc641ead52
1 changed files with 11 additions and 10 deletions
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21
pkgs/development/r-modules/default.nix
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@@ -432,6 +432,7 @@ let
pkg-config
which
];
JMcmprsk = [ pkgs.gsl ]; # for gsl-config
KSgeneral = with pkgs; [ pkg-config ];
LCMCR = [ pkgs.gsl ]; # for gsl-config
ModelMetrics = lib.optional stdenv.hostPlatform.isDarwin pkgs.llvmPackages.openmp;
@@ -444,6 +445,7 @@ let
RDieHarder = [ pkgs.gsl ]; # for gsl-config
RGtk2 = [ pkgs.pkg-config ];
RJMCMCNucleosomes = [ pkgs.gsl ]; # for gsl-config
RKHSMetaMod = [ pkgs.gsl ]; # for gsl-config via RcppGSL
RMariaDB = [ pkgs.libmysqlclient ]; # for mysql_config
RMySQL = [ pkgs.libmysqlclient ]; # for mysql_config
RNetCDF = [ pkgs.pkg-config ];
@@ -614,6 +616,7 @@ let
diversitree = [ pkgs.gsl ]; # for gsl-config
dynr = [ pkgs.gsl ]; # for gsl-config
eaf = [ pkgs.gsl ]; # for gsl-config
econetwork = [ pkgs.gsl ]; # for gsl-config via RcppGSL
enderecobr = with pkgs; [
cargo
rustc
@@ -669,10 +672,7 @@ let
rustc
];
git2r = [ pkgs.pkg-config ];
glpkAPI = with pkgs; [
gmp
glpk
];
glpkAPI = [ pkgs.glpk ]; # detects prefix from glpsol binary
gsl = [ pkgs.gsl ]; # for gsl-config
gslnls = [ pkgs.gsl ]; # for gsl-config
h3o = with pkgs; [
@@ -779,6 +779,7 @@ let
cargo
rustc
];
rcontroll = [ pkgs.gsl ]; # for gsl-config
redux = [ pkgs.pkg-config ];
reprex = [ pkgs.which ];
resultant = [ pkgs.pkg-config ];
@@ -786,7 +787,11 @@ let
rgeos = [ pkgs.geos ]; # for geos-config
ridge = [ pkgs.gsl ]; # for gsl-config
rjags = [ pkgs.pkg-config ];
rlas = [ pkgs.pkg-config ];
rlas = with pkgs; [
pkg-config
gdal # for gdal-config
geos # for geos-config
];
rmatio = [ pkgs.pkg-config ];
rnetcarto = [ pkgs.gsl ]; # for gsl-config
roxigraph = with pkgs; [
@@ -980,7 +985,6 @@ let
HiCParser = [ pkgs.zlib ];
HiCseg = [ pkgs.gsl ];
HilbertVisGUI = [ pkgs.gtkmm2.dev ];
JMcmprsk = [ pkgs.gsl ];
KFKSDS = [ pkgs.gsl ];
KSgeneral = [ pkgs.fftw.dev ];
LOMAR = [ pkgs.gmp ];
@@ -1262,6 +1266,7 @@ let
gfilogisreg = [ pkgs.gmp.dev ];
ggiraph = [ pkgs.libpng ];
git2r = [ pkgs.libgit2 ];
glpkAPI = [ pkgs.gmp ];
gmapR = [ pkgs.zlib ];
gmp = [ pkgs.gmp ];
gpg = [ pkgs.gpgme ];
@@ -1462,7 +1467,6 @@ let
rawrr = [ pkgs.mono ];
rbedrock = [ pkgs.zlib ];
rcdd = [ pkgs.gmp ];
rcontroll = [ pkgs.gsl.dev ];
redux = [ pkgs.hiredis ];
registr = with pkgs; [
icu.dev
@@ -1491,11 +1495,8 @@ let
ridge = [ pkgs.gsl ];
rjags = [ pkgs.jags ];
rlas = with pkgs; [
boost
gdal
proj
sqlite
geos
];
rmatio = [ pkgs.zlib ];
rmumps = with pkgs; [ zlib.dev ];