Files
2026-10-18 11:12:26 +01:00

219 lines
4.7 KiB
Nix

{
lib,
stdenv,
buildPythonPackage,
fetchFromGitHub,
pythonAtLeast,
# build-system
cmake,
cython,
ninja,
pkg-config,
scikit-build-core,
# native dependencies
c-blosc2,
# dependencies
msgpack,
ndindex,
numexpr,
numpy,
httpx,
threadpoolctl,
pydantic,
rich,
# optional dependencies
fsspec,
h5py,
hdf5plugin,
matplotlib,
pyarrow,
textual,
textual-image,
textual-plotext,
zarr,
# tests
psutil,
pytestCheckHook,
pytest-asyncio,
pytest-xdist,
torch,
runTorchTests ? lib.meta.availableOn stdenv.hostPlatform torch,
}:
let
sleefRev = "7623d6cfa2712462880fa63a4d0f0b5f775d1a83";
miniexprRev = "f0b8c94771cd21d3c9029d6ccec204ab3a67584f";
tinyccRev = "695ad1e6b5c9a00875192ca1f3a9c4949dee4858";
in
buildPythonPackage rec {
pname = "blosc2";
version = "4.14.1";
pyproject = true;
srcs = [
(fetchFromGitHub {
owner = "Blosc";
repo = "python-blosc2";
tag = "v${version}";
hash = "sha256-SZMsRGkg2Xqo6eKCxwsNWGteeUnM4KtT5Z/0CS0QDPI=";
})
(fetchFromGitHub {
name = "miniexpr";
owner = "Blosc";
repo = "miniexpr";
rev = miniexprRev;
hash = "sha256-s84xa/94CHq7bu6mw9XU7Q8TfmSFpdhpLxHOG1XrMu4=";
})
(fetchFromGitHub {
name = "sleef";
owner = "shibatch";
repo = "sleef";
rev = sleefRev;
hash = "sha256-a0OB2gQI8RlR7liXdlOZo4xDl3f2p9thrCm8CwD2jRM=";
})
(fetchFromGitHub {
name = "tinycc";
owner = "Blosc";
repo = "minicc";
rev = tinyccRev;
hash = "sha256-qLomeOAw0ipIJOo8/GtBEa1ZsjVtEDlb3/ph7uMcsZk=";
})
];
sourceRoot = "source";
nativeBuildInputs = [
cmake
ninja
pkg-config
];
# perform parameter expansion for CMAKE_ARGS
preUnpack =
let
cmakeArgs = toString [
(lib.cmakeBool "USE_SYSTEM_BLOSC2" true)
(lib.cmakeFeature "FETCHCONTENT_SOURCE_DIR_MINIEXPR" "$PWD/miniexpr")
(lib.cmakeFeature "FETCHCONTENT_SOURCE_DIR_SLEEF" "$PWD/sleef")
(lib.cmakeFeature "FETCHCONTENT_SOURCE_DIR_TINYCC" "$PWD/tinycc")
];
in
''
export CMAKE_ARGS="${cmakeArgs}"
'';
postUnpack = ''
# ensure our separately pinned versions correspond to those in source
if ! grep -F '${miniexprRev}' source/CMakeLists.txt ; then
echo 'Expected to find ${miniexprRev} in source/CMakeLists.txt:' \
'has miniexpr source been updated to match pinned version?'
exit 1
fi
if ! grep -F '${sleefRev}' miniexpr/cmake/MiniexprFetchDeps.cmake ; then
echo 'Expected to find ${sleefRev} in miniexpr/cmake/MiniexprFetchDeps.cmake:' \
'has sleef source been updated to match pinned version?'
exit 1
fi
if ! grep -F '${tinyccRev}' miniexpr/cmake/MiniexprFetchDeps.cmake ; then
echo 'Expected to find ${tinyccRev} in miniexpr/cmake/MiniexprFetchDeps.cmake:' \
'has tinycc source been updated to match pinned version?'
exit 1
fi
'';
dontUseCmakeConfigure = true;
build-system = [
cython
numpy
scikit-build-core
];
buildInputs = [ c-blosc2 ];
dependencies = [
msgpack
ndindex
numexpr
numpy
threadpoolctl
pydantic
rich
httpx
]
++ httpx.optional-dependencies.http2;
nativeCheckInputs = [
psutil
pytestCheckHook
pytest-asyncio
pytest-xdist
h5py
pyarrow
textual
textual-plotext
]
++ lib.optionals runTorchTests [ torch ];
disabledTestMarks = [
"network"
"heavy"
];
disabledTests = [
# attempts external network requests
"test_with_remote"
# segfaults, but only under nix sandbox
"test_dsl_save_clamp"
]
++ lib.optionals (pythonAtLeast "3.14") [
# https://github.com/Blosc/python-blosc2/issues/551
"test_expand_dims"
];
# otherwise attempts to find package files for doctests
enabledTestPaths = [ "tests" ];
disabledTestPaths = [
# Threads grow without limit
# https://github.com/Blosc/python-blosc2/issues/556
"tests/ndarray/test_lazyexpr.py"
"tests/ndarray/test_lazyexpr_fields.py"
"tests/ndarray/test_reductions.py"
];
optional-dependencies = rec {
fsspec = [
fsspec
fsspec.optional-dependencies.http
];
hdf5 = [
h5py
hdf5plugin
];
hires = tui ++ [
matplotlib
textual-image
];
parquet = [ pyarrow ];
tui = [
textual
textual-plotext
];
zarr = [ zarr ];
};
passthru.c-blosc2 = c-blosc2;
meta = {
description = "Python wrapper for the extremely fast Blosc2 compression library";
homepage = "https://github.com/Blosc/python-blosc2";
changelog = "https://github.com/Blosc/python-blosc2/releases/tag/${(builtins.head srcs).name}";
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ ris ];
};
}